Dipodomys merriami (Merriam's kangaroo rat): 138826691
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Entry
138826691 CDS
T11079
Symbol
Ifih1
Name
(RefSeq) interferon-induced helicase C domain-containing protein 1
KO
K12647
interferon-induced helicase C domain-containing protein 1 [EC:
5.6.2.6
]
Organism
dmer Dipodomys merriami (Merriam's kangaroo rat)
Pathway
dmer04622
RIG-I-like receptor signaling pathway
dmer05161
Hepatitis B
dmer05162
Measles
dmer05164
Influenza A
dmer05168
Herpes simplex virus 1 infection
dmer05171
Coronavirus disease - COVID-19
Brite
KEGG Orthology (KO) [BR:
dmer00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
138826691 (Ifih1)
09160 Human Diseases
09172 Infectious disease: viral
05161 Hepatitis B
138826691 (Ifih1)
05171 Coronavirus disease - COVID-19
138826691 (Ifih1)
05164 Influenza A
138826691 (Ifih1)
05162 Measles
138826691 (Ifih1)
05168 Herpes simplex virus 1 infection
138826691 (Ifih1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
dmer04054
]
138826691 (Ifih1)
Enzymes [BR:
dmer01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
138826691 (Ifih1)
Pattern recognition receptors [BR:
dmer04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
138826691 (Ifih1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CARD_2
RIG-I_C-RD
RIG-I_C
ResIII
Helicase_C
DEAD
CARD
SNF2-rel_dom
SWI2_SNF2
DUF3638
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
138826691
NCBI-ProteinID:
XP_069878036
LinkDB
All DBs
Position
Unknown
AA seq
1018 aa
AA seq
DB search
MSNEHSSDKSFRYLISCFRARVKMYIQVEPVLDYLTFLSGEVKEQILRTAATHGNTPAAE
LLLNTLEKEAWPLGWTQEFVEALRRTGNRLAACYMNPELTDLPSPSLETAHDECLQLLNL
LQPTLVDRLLVRDVLDQCVEQELLTIEDRNRISAAENNGNESGVRELLRRIVQKENWFSI
FLNILHQTRNNELVRELTGVVCSEKDAESGQLSHDEGPEINEPLPSASDKPNAEGERSLE
NSALESTLAVSSEVSESDTSLAEGSVSCLDESLGHNSNMGSDSGTMGSDSDEEKVAERAS
PEPELQLRPYQMEVAKPALEGKNIIICLPTGSGKTRVAVYIAKDHLDKKKQASELGKVIV
LVNKVMLVEQLFDKEFKPFLKKWYNIMKLSGDTQLKISFPEVVKTYDVIISTAQILENSL
VNLENGEDAGVQLSDFSLIIIDECHHTNKEAVYNNIMRRYLKQKLKNNSLKKENKPIVPL
PQILGLTASPGVGGAKNQAEAEKHILKICANLDAFTIQTVKDNLDQLKCQVKEPCKKFSI
ADDTREYPFKEKLLEIMTRIQTYCQLNPMSEFGTQTYEQWAIRMEKKAAKEGNRKDRVCA
EHLRKYNEALQINDTIRMIDAYKHLESFYTDEKEKKIAAAEEDNDESENDDKQEGNLKKP
LKLDATDIFLINLFFENKNMLKTLAEDPKYENEKLTKLRNTILEQYTRTAESIRGIIFTK
TRQSTYALSQWIAENEKFAEVGVKAHHLTGAGHSSEFKPMTQNEQKEVIRKFRTGKINLL
IATTVAEEGLDIKECNVIIRYGLVTNEIAMVQARGRARAEESTYILVAHSGSGVVERETV
NDFREKMMYKAIHCVQNMKPEDYAHKILELQLQSILEKKMKIKRSIAKQYKDNPSLITFL
CKNCSVLACSGENIHVIEKMHHVNMTPEFKELYIVRENKALQMKFADYQTNGEIICKCGQ
AWGTMMVHRGLDLPCLKIRNFVVFFKNNSSKKQYKKWVELPIAFPDLDYSEYLFSVED
NT seq
3057 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaatgagcattcctccgacaagagttttcgctatctcatctcgtgcttcagggcc
agagtgaaaatgtacatccaggtggagcctgtgctggactacctgacctttctgagcgga
gaagtcaaagagcaaattctgaggacagctgccacccatggaaacacccccgcggccgaa
ctgcttctcaacacgttggagaaggaggcctggcccctgggctggactcaggagtttgtg
gaagccctcaggagaacgggcaaccgcctagctgcctgctatatgaaccctgagctcacc
gacttaccctccccatccttggagactgctcacgatgaatgtctgcagttgctgaacctt
cttcagcccaccttggtggaccggctcctggtcagagatgtcttggatcagtgtgtggaa
caggagctgttgacaattgaagacagaaatcggatttctgctgcagaaaataatggaaat
gaatctggtgtaagagagctactaaggaggattgtacagaaagaaaactggttttctatt
tttctgaacatccttcaccaaactagaaacaatgagcttgtccgagagttaacaggtgtt
gtttgctcagaaaaagatgcagagagtgggcagttgtcacatgatgaaggtcctgaaata
aatgagccccttccttcagcttcagataagccaaatgcagaaggggaacgcagcctggag
aatagtgcattggagtcaaccttggcagtctcttctgaggtttcagaatcagacacaagt
ttggcagaaggaagtgtcagctgcttagatgaaagtcttggacataacagcaacatgggc
agtgattcaggcaccatgggaagtgattcagatgaagagaaggtggcagaaagagcctcc
cctgagccagaactacagcttaggccttaccaaatggaagttgccaaaccagccttggaa
ggaaagaatataattatctgcctgcctacaggaagtgggaaaactagagtggctgtttac
attgccaaggaccacttggacaaaaagaagcaagcatcggaacttgggaaagttatagta
ctggtcaataaggtaatgctggtagaacagctctttgacaaagagttcaaaccatttttg
aagaaatggtataatattatgaaattaagtggtgatactcaactgaaaatatcatttcca
gaagttgtcaaaacctatgatgtcattatcagtacagcgcaaatccttgaaaactccctc
gtaaacttggaaaacggagaagatgctggtgtccagttgtcagacttttccctcattatc
attgatgaatgtcatcacaccaacaaagaagctgtctacaacaacatcatgaggcgttat
ttgaaacagaagttaaaaaacaacagcctcaagaaagaaaacaaaccaatagttcccctg
cctcagatcctaggactcacagcttctcctggcgttggaggggccaaaaatcaagcagaa
gctgaaaaacacattttgaaaatatgtgccaatcttgatgcatttaccattcaaacagta
aaagataatcttgaccaactcaaatgtcaagtaaaagagccatgcaagaagttttcaatt
gcagatgacacaagggaatatccatttaaagagaaacttctagaaataatgacaaggatt
caaacctactgccaattgaatccaatgtcagagtttggaactcagacttatgagcaatgg
gccattcgaatggagaaaaaagctgctaaagaaggcaatcgtaaagatcgggtctgtgca
gaacacttgaggaagtacaatgaagccctccaaattaatgacacaatccgaatgattgat
gcctataaacaccttgagtctttctacactgatgagaaggaaaagaagattgcagctgca
gaagaagacaatgatgaaagtgaaaatgatgacaaacaggagggcaatttaaagaaacct
ttgaaactcgatgccacagacatatttctcatcaatttattctttgaaaacaagaacatg
ttgaaaacattggctgaagacccaaaatatgaaaatgaaaaactcaccaagttaagaaac
actatattggaacaatatactaggactgctgaatccattcggggaataattttcacaaaa
acaagacaaagtacatatgctctttctcagtggattgctgaaaatgaaaaatttgcagaa
gtgggagttaaagcccaccatctgactggagctggacatagcagtgagttcaagcctatg
acacagaatgaacaaaaagaagtcattaggaaatttcgcactggaaaaataaatctgctt
atcgctaccacagtagcagaagaaggtctggacatcaaagaatgtaatgtcattatccgt
tatggtctggtcacaaatgaaatagccatggtccaggcccgtggtagagccagagctgag
gagagcacctacatattggttgctcacagtggttctggagtggttgaacgtgagacagtt
aatgatttcagagagaagatgatgtataaagctattcactgtgttcaaaacatgaaacca
gaagactatgcacataagattttggaattacagttgcaaagcatattggaaaagaaaatg
aaaattaagagaagtattgccaaacagtacaaagacaatccatcattaattacttttctc
tgcaaaaactgtagtgtgctagcctgctcgggggaaaatatccacgtaattgagaaaatg
catcacgtcaatatgacaccagaattcaaggaactctacattgtaagagaaaacaaagca
ctgcaaatgaaatttgctgactaccaaacaaatggagagattatctgcaaatgtggccaa
gcttggggaacaatgatggtacacagaggcttggatttgccatgtcttaaaataaggaat
tttgtagtttttttcaaaaataattcatcaaagaaacaatacaagaagtgggtagaatta
cctatcgcatttcctgatcttgattattcagagtatttgttcagtgttgaggattag
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integrated database retrieval system
