Dipodomys merriami (Merriam's kangaroo rat): 138826898
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Entry
138826898 CDS
T11079
Symbol
Herc5
Name
(RefSeq) E3 ISG15--protein ligase HERC5
KO
K22372
E3 ISG15--protein ligase [EC:2.3.2.-]
Organism
dmer Dipodomys merriami (Merriam's kangaroo rat)
Brite
KEGG Orthology (KO) [BR:
dmer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dmer04121
]
138826898 (Herc5)
Ubiquitin system [BR:
dmer04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
138826898 (Herc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
RCC1
RCC1_2
Motif
Other DBs
NCBI-GeneID:
138826898
NCBI-ProteinID:
XP_069878358
LinkDB
All DBs
Position
Unknown
AA seq
1034 aa
AA seq
DB search
MEPRRRKSRGSARSTPGCRPAASPRTPAFRPAAPRAATSPAAQVWLFPGAEELRSALSRR
LESVRQVCCTRRRLVVLERGGTGVEIHLLPVGLDGARKPRFIKLGKKMKIHSMDQGVEHL
LVLSSDGKPFEYNYSLEHARFQSILQEKSIIQIACGDYHSLALSKGGELFSWGQNLYGQL
GVGKTLSSSPTPQIVEHLAGVPLIQISAGEAHSMALSMSGNIYSWGKNDFGQLGLGHIKN
KDFPSLIEAVDNQKVEFVACGGSHTALLTQDGLLFTFGAGKYGQLGHNSTQNKLSPCLVT
ELHGHRVTQIVCGRWHTLAYVSDVGKVFSFGFGKEGQLGNDGKHNQLIPLPMKLASNEEL
KLEYHNSGKELIMIAGGNQSILLWMEKENSYVNLRRKILTLNEGTPKRWIADVGTKQWQN
TKREIREIFASPACLTGSFLKERLTAETMSVYLDLSKARNTFKELTQKDWIINTIIACIK
DNLLKNLPLHSSYQEALEVFLLLPQCPVMHDINYWENLVVPFAEAICKMSDQSLRIMEML
WTTLQESVFSKLVQMFKTALGAQLRYWAESDVNNGHLKALLEILKMLHRVNQNKFQLPEN
IFEVDELSEWLNFYGEAYRRSSWKTNGDTGANTQYSIIFSHFPFIFNILSKIKLLYADSL
LKIQERKIRACMSLAGILVQEESEFALVPTFNLRIRRNHLVEDVLNQLSQFENEDLRREL
WISFSGEIGYDFGGVKTEFFYCLFEEMTRPEYGMFVYPEEASYMWFPVNPKFEVKRYFLF
GVLCGLSLFNCNVANIPFPLALFKKLLAKTPSLEDLKELSPVMGKSLQTLLEDENSDFGE
TLYIYFNVHWDRTDVDLIPNGKYIAVNQTNKTDYVSKCIDYIFNTSVKDIYEEFQRGFYK
VCNKEIIEFFQPEELKDVIIGNTDYDWEMFEKNANYDRGYSNSHPTIVMFWEALHKLTLE
EKRKFLVFLTGTDRLQRKDLKDMKITFCCPESLDEKDPMRAQTCFSLLYLPKYSTMERVE
EALQIAINSNRGFG
NT seq
3105 nt
NT seq
+upstream
nt +downstream
nt
atggagcctcggcggaggaagtcgcggggttcggcgcgttcgactcccgggtgccggccg
gccgcctcgcctcggaccccggcattccggcccgccgcgccccgcgccgccacctccccg
gccgcgcaggtctggttgttccccggcgccgaggagctccgcagcgctctgtcccggagg
ttggagagcgtgcgccaggtctgctgcacccggcggcgcctggtggtgctggagcgcggc
gggacgggcgtcgagatccacctgctgcccgtgggcctcgatggcgcccggaagccccgg
ttcattaagttagggaaaaaaatgaagatacattccatggaccaaggagtggaacatctg
ctggttttatcctccgatggaaaaccctttgagtacaactacagcctagaacatgcaagg
tttcaaagcattttacaagaaaaaagtataattcagattgcctgtggagattatcattct
cttgcactttctaaaggtggtgagcttttctcgtggggacagaacttgtacggccagcta
ggagtcggaaagacattgtcctcatctcccacaccacagattgtggagcatcttgcagga
gtccccttgattcagatttctgcaggagaagcacacagcatggctttgtccatgtctgga
aacatctactcatggggaaaaaatgattttggacaactaggcctgggccacatcaagaac
aaagattttccttctcttattgaagcagtagacaatcagaaagttgaatttgttgcttgt
ggtggctctcatactgccctgcttactcaggatgggctgctgtttacttttggtgctgga
aaatatgggcagcttggtcacaattcaacacagaataagttgagtccttgtttggtaact
gagctccatggacatagagtgactcaaatagtttgtggaaggtggcacacacttgcctac
gtttctgatgtgggaaaagttttttcctttggttttgggaaagaaggacaattaggaaat
gacggaaaacataatcaactgataccgcttcccatgaaattggcatcaaatgaagaactc
aaactggaatatcacaattcaggaaaggaactgataatgattgctggagggaaccaaagc
attttgctgtggatggaaaaagagaattcctatgtaaatctgagaagaaaaattcttaca
ttgaatgaagggactccaaagagatggattgcagatgtaggaactaaacagtggcagaat
acaaaaagggaaattcgagagatatttgcatctcctgcctgcctgactggaagtttctta
aaggaaagactgactgcagaaaccatgtctgtttatctggacttaagtaaagcaagaaac
acctttaaggaattaactcaaaaagactggattattaacacgataatcgcctgtatcaag
gacaatctgctaaaaaatttgccactccattcttcataccaagaagcactagaagttttc
ttgctactcccacaatgtcctgtgatgcatgatattaactactgggagaacctagtagta
ccatttgccgaggctatttgtaaaatgagtgaccaatctttaagaattatggagatgctc
tggaccacactacaagagtctgttttcagcaaattggtgcagatgtttaaaactgccttg
ggtgctcagttgcgttactgggctgaaagtgatgtgaataacggccaccttaaagctctc
ctagaaatactgaaaatgctgcatagggttaatcagaacaaatttcaactgcctgaaaat
atttttgaagtagatgaattatcagaatggctcaatttttatggagaagcatatcgaaga
tcctcttggaaaacaaatggggacactggagctaatacacaatattctatcatattcagt
cacttcccatttatttttaatattctgtcgaaaattaaactactgtatgcggattcactt
ctgaaaatacaggagagaaaaataagagcttgtatgagtttggcaggaattttggtacaa
gaagagtcagaattcgctttggtgcccacttttaatcttcgaataagaaggaaccacttg
gttgaggatgttttaaatcaactaagtcaatttgaaaatgaagacctcaggagggagtta
tggatttcatttagtggagaaattggatatgactttggaggagtcaaaacagagttcttc
tactgtctgtttgaagagatgacccggccagaatatgggatgtttgtttatcctgaagag
gcttcctacatgtggtttcctgtcaatcctaaatttgaggtgaagagatatttcttgttt
ggagttctctgtggactttcccttttcaattgcaatgttgccaacatccctttcccattg
gcactctttaagaagcttttggctaaaaccccatcactggaagatttaaaagaacttagt
cctgttatggggaagagtttacaaacacttctggaagatgaaaacagtgattttggagaa
acactttacatctattttaatgtgcactgggacagaactgatgtagacttaattcctaat
ggaaaatacatagctgtcaaccagactaacaagacagactatgtgtctaagtgtattgat
tatatcttcaacacctctgtaaaggacatttatgaagaatttcagagaggattttataaa
gtgtgcaacaaggagataatagaatttttccagcctgaagaactgaaggatgtgattatt
ggaaacacagattatgactgggaaatgtttgaaaagaatgcaaattatgaccgaggatac
agtaattcacatcccactatagtgatgttctgggaggctttacacaaactgactctggag
gaaaagagaaaattccttgtattccttacaggtactgacagattacaaagaaaagactta
aaagatatgaaaataacattttgttgtcctgagagtttggatgaaaaagatcccatgaga
gcccaaacatgctttagtcttctctacctccctaagtattctaccatggaaagagtagaa
gaagcacttcagatagccatcaacagcaacagaggctttggctga
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