KEGG   Dipodomys merriami (Merriam's kangaroo rat): 138827180
Entry
138827180         CDS       T11079                                 
Symbol
Gemin5
Name
(RefSeq) gem-associated protein 5 isoform X1
  KO
K13133  gem associated protein 5
Organism
dmer  Dipodomys merriami (Merriam's kangaroo rat)
Brite
KEGG Orthology (KO) [BR:dmer00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dmer03019]
    138827180 (Gemin5)
   03041 Spliceosome [BR:dmer03041]
    138827180 (Gemin5)
Messenger RNA biogenesis [BR:dmer03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     138827180 (Gemin5)
   mRNA cycle factors
    P-body specific factors
     138827180 (Gemin5)
Spliceosome [BR:dmer03041]
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   SMN complex factors
    138827180 (Gemin5)
SSDB
Motif
Pfam: GEMI5_RBS TPR_GEMI5 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40_CDC20-Fz Beta-prop_RIG_2nd Beta-prop_WDR5 Beta-prop_EML_2 WD40_Prp19 WD40 WD40_WDHD1_1st ANAPC4_WD40 Beta-prop_WDR36-Utp21_1st Beta-prop_WDR3_2nd WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_2nd Beta-prop_HPS5 EIF3I Beta-prop_RIG_1st Beta-prop_WDR19_1st Beta-prop_IFT140_1st Beta-prop_EML Beta-prop_Aladin WD40_Gbeta Beta-prop_WDR75_1st WDR90_beta-prop_4th Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd Beta-prop_EIPR1 WD40_RFWD3 Beta-prop_WDR41 MIOS_WD40 WD40_MABP1-WDR62_1st Beta-prop_WDR35_TULP_N NBCH_WD40 WD_LRWD1 Tricorn_2nd
Other DBs
NCBI-GeneID: 138827180
NCBI-ProteinID: XP_069878768
LinkDB
Position
Unknown
AA seq 1519 aa
MGLEPRTLPPSPNWYCTRCSDAVPGGLFGFAARTSVFLVRVGPGAGAIPGTPPFRVIGEL
VGHTEKVSGFTFSHHPGQYHLCATSSDDGTVKIWDVETKTVVTEHALHQHTISALHWSPR
VKDLIVSGDEKGVVFCYWLNRNDSQHLFIEPRTIFCLTCSPHHEDLVAIGYKDGIVVIID
ISKKGEVIHRLRGHDDEIHSIAWCPLPGEDCLSLNQEENSEEPEITNGKVKTETPETKGC
YLATGSKDQTIRIWSCSRGRGVMILKLPFLKRRGGGIDPTVKERLWVTLYWPKNQPTQLI
SSCFGGELLLWDLTQSWRRKYTLFSTSAEGQNHSRIVFNLCPLQTEDDKQLLLSTSMDRD
VKCWDMATLECCWTLPSLGGFAYSLAFSPVDLGCLAIGVGDGMIRVWNTLSIKNNYDVKN
FWQGVKSKVTALCWHPNKEGCLAFGTDDGKVGLYDTYSNKPPQISSTYHKKTVYTLAWGP
PVPPMPLGGEGDRPSLTLYSCGGEGIVLQHNPWKLSGEAFDINKLIRDTNSTKYKLPVHT
EISWKADGKIMALGNEDGSIEIFQVPNLKLICIIQQHHKLVNTITWHHEHGSQPELSYLM
ASGSNNAVIYVHNLKTVIESNPESPVTMTEPYRTLSGHTAKITSLAWSPHHDGRLVSASY
DGTAQVWDTLREEPLCNFRGHRGRLLCVAWSPLDPDCIYSGADDFCVYKWLISMQDHSRP
PQGKKSIELEKKRLSQPKPKAKKKKKPTLRMLIKQESLEGNEESIKENSVPTENGVSDQE
GEEEAQEPESPCGLTTMDARESIVCTPVSSSFEKSKVTINNKVTLLKKEPPKEKSEASIK
KRKARSMLPLSTSLDHRSKEELHHDCLVLATAKHSKERNEDMSADLEERFHLGLFTDRPT
LYRMIETEGKGHLENGHPELFHQLMLWKGDLKGVLQTAAERGELTDNLVAMAPVAGYHVW
LWAVEAFAKQLCFQDQHVKAASHLLSIHKVYEAVELLKSNHFYREAIAVAKARLRPEDPV
LKDLYLSWGTILERDGHYAIAAKCYLGATSTYDAAKVLAKKGDAASLRTAAELAVIVGEN
ELSASLALRCAQELLLAKNWVGAQEALQLHESLQGQRLVFCLLELLCKHLEEKQLPEGRT
STSSSSSSSSYHSWATGTEGPFVQRVTTVWKSVFSLDTPGKYHTALKKLQDVKYPSATNN
TPSKQLLLHICHDLTLVVLNQQVASWDEAVIALLRAVVRSYDSGNFTIMQEIHWTFLPDG
CDHLRDKLGDDQSPATPAFKSLEAFYIYGQLYEIWWSLSRSESSVWAIAGHKRTPLVKQS
QQPDSPRTEETDSRASSPQEPHWPPQSDLRLTERSQRVLSACKELLSEKHAILQDSQRTV
AGVQETLAEMIRQHQKSQLCKSTTSSPDKNELEQETEQQVPSTQSQCKEETNEPVSLPEL
TKRLTEANERIAKFPESMKTWPFPDVLECCLVLLCIKSQCPGCVTQETQQQAQELLRKYG
TTKTYRRHCQTSACELERT
NT seq 4560 nt   +upstreamnt  +downstreamnt
atggggctggagccgcggacgctgccgccctctccgaactggtactgcacccgctgcagc
gacgcggtgcccgggggcctctttggcttcgccgcgcggacctccgtcttcctagtccgc
gtgggcccgggtgcgggtgccatcccggggacgcccccgtttcgagtcataggagagttg
gtgggacacaccgaaaaggtctccggcttcacattttctcatcaccccggtcagtaccac
ctctgtgccaccagttcagacgatggaaccgtgaagatctgggatgtagagacgaaaaca
gtagtgacggagcatgcacttcatcagcatacaatatcagcattgcactggtctcctcga
gtgaaggatttaattgtgtctggggatgaaaaaggagttgtattctgttattggcttaac
agaaatgacagccagcacctctttatagagcccaggacaattttctgtcttacttgttca
cctcaccatgaagatttagtggccattggctacaaggatggcatagtggttataattgac
atcagtaagaaaggagaagttattcacaggcttcgaggccacgatgatgagatccactcc
atagcctggtgtcccctacctggtgaagattgcttatccttaaaccaagaggaaaattca
gaagaaccggaaattaccaatgggaaagttaaaacagaaactccagaaacaaagggctgc
tacttagccactggaagcaaagatcagacaattcgaatttggagctgctctagaggaaga
ggagtgatgattttgaaattgccctttctgaaaagaagaggaggaggcatagacccaact
gttaaagaacgcctttgggtgacactctattggcccaagaatcagccaacacagctgata
tccagttgttttggaggcgaactgctgctgtgggatctcacccagtcttggagacggaaa
tataccctttttagtacatcagcagaaggacaaaatcactccagaattgtgtttaattta
tgtcctttgcaaactgaagatgacaaacaactgctactttctacatcaatggatagagat
gtcaaatgttgggacatggccaccctagaatgctgctggaccctgccttcccttggtggg
ttcgcctacagcctggctttttctcctgtggatttaggctgtttagccataggtgttggg
gacggtatgatccgtgtatggaatacactatccataaagaacaactatgatgtaaaaaat
ttttggcaaggtgtcaaatccaaagttacagcgctgtgctggcacccaaacaaagaaggt
tgtttggcttttggaactgatgatggaaaagtgggattgtatgacacctattctaacaaa
cctccacagatttcaagcacatatcataagaagactgtgtacacattagcctggggtcca
ccagtgcctcccatgccactcggaggagaaggagacagaccttccctcactttatacagc
tgtggaggggaagggattgtcttacagcataacccctggaagctgagtggtgaggccttt
gacatcaacaaactcatcagggacaccaattctaccaaatacaaattgcctgtacacaca
gagatcagctggaaagcagatggcaaaatcatggctcttggcaatgaagatggatcaata
gaaatatttcaggttcccaacttgaagctgatctgcatcatccagcagcatcacaaactt
gtgaacaccattacctggcatcatgaacatggcagccaaccggaactcagctatctgatg
gcttcaggctccaacaatgcagtcatttatgtacacaatctgaaaactgtcatagagagc
aatcctgagtctccagtgaccatgacagaaccctaccggaccctctcaggacacacagct
aagattaccagtctggcgtggagcccgcatcacgatgggaggctagtgtctgcttcctac
gatggaacggcacaggtgtgggatactctccgagaagagcctctatgcaacttccgagga
catcgaggccgactgctctgtgtagcatggtccccattggatccggattgcatctactca
ggggcagatgacttctgcgtgtacaaatggctgatttccatgcaagaccattctaggcct
cctcaaggcaaaaaaagtattgaattagagaaaaaacggctctctcaacctaagccaaaa
gccaagaaaaagaaaaaacctaccttgcgcatgcttataaagcaggagtcgcttgaaggg
aatgaagagagcataaaggagaactcagtacccacagagaatggcgtgtcagaccaagag
ggcgaagaggaagcccaagagccagagtcaccctgtggcctcactaccatggatgccaga
gaatcaattgtctgcactccagtttcttcgagctttgaaaagtcaaaagttactattaat
aacaaagttactttactgaaaaaggaaccacctaaagagaaatcagaagcctcgatcaag
aagaggaaagctcggtccatgcttcctctgagtacaagcctggatcacaggtccaaagag
gaacttcatcatgactgtttggtgctagcaactgcaaaacactccaaagagcgaaatgag
gatatgtctgctgatcttgaggaaagatttcacctggggcttttcacagacaggcctacc
ctgtacagaatgattgagacggaagggaaagggcacttggaaaatggacaccctgaatta
tttcatcagctaatgctttggaaaggagatttaaagggtgttcttcagacggcagcagaa
agaggggagctgacagacaatcttgtggctatggcaccagtagctggctaccatgtgtgg
ctgtgggctgtggaagcctttgccaagcagctgtgtttccaagatcagcatgtcaaagct
gcgtcgcacctgctttccatccacaaagtatatgaagccgtggagctgctcaagtcaaac
cacttttacagagaagctattgcagttgccaaggcccggctgaggcccgaggacccagtc
ttaaaagacctgtacctcagctggggaaccatcctggaaagagatggccattatgccata
gcagccaaatgctatttaggtgccacttctacttatgatgcagccaaagttttggccaag
aagggggatgctgcatcacttagaacggctgcagagctggctgtgattgttggagaaaat
gagctctccgcttcgctggctctcagatgtgcccaagaattgctgctggccaagaactgg
gtgggagcccaggaagccttgcagctgcatgaaagtctacagggtcagagactggtattt
tgtctccttgagctactgtgcaagcatctggaggaaaagcagcttccagaaggcagaacc
tccacctcctcctcctcctcctcctcctcttaccacagttgggcaacaggtacagaagga
ccctttgtgcagagagtgactacagtgtggaaaagcgtcttcagccttgacaccccaggg
aaataccatacagccttgaaaaagctgcaagatgtgaagtacccatctgctacaaataac
acaccctccaaacagctcctgctccacatttgccacgatctgaccttggtggtgctgaac
cagcaggtggcctcctgggatgaggcagtgatagctctgcttcgggctgtggtccggagc
tatgactccgggaatttcaccatcatgcaggaaatccactggacctttctccctgacggc
tgtgaccacctaagagacaaactgggtgatgatcaatctcctgccacaccagcttttaaa
agtttggaggccttttatatatatgggcaactatatgaaatctggtggtctctgtccagg
tctgagtccagtgtgtgggcaatagctggccacaagaggacaccgttggttaagcagagc
cagcagccagacagtcctcgtactgaagagactgactcaagagctagttctccgcaagag
ccacattggcctccccaatcagacttgagactcacagagagaagtcagcgcgtgctgagt
gcttgtaaggagctcctttcagaaaagcacgccattctccaggactcccagagaacagtt
gctggtgtccaagagacattagcagaaatgatccgccaacaccagaagagtcagctctgt
aaatccacaaccagcagccctgataagaatgaacttgaacaggaaacagagcagcaggtg
cccagtactcagagccagtgtaaagaagaaacaaatgagccagtttctctgcctgaatta
accaaaaggctcacagaggcaaatgagcgaatagctaaatttcctgagagtatgaagacc
tggcccttccccgatgtgctggagtgctgcctcgtcctgctgtgcatcaagtcccagtgt
cccggctgtgtgacgcaagaaacgcagcaacaggcccaggagctcctgcggaagtatggc
accacaaaaacatacaggagacactgccagacctctgcgtgtgaacttgaaaggacctag

DBGET integrated database retrieval system