Dipodomys merriami (Merriam's kangaroo rat): 138827611
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Entry
138827611 CDS
T11079
Symbol
Nvl
Name
(RefSeq) nuclear valosin-containing protein-like isoform X1
KO
K14571
ribosome biogenesis ATPase
Organism
dmer Dipodomys merriami (Merriam's kangaroo rat)
Pathway
dmer03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
dmer00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
138827611 (Nvl)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dmer03009
]
138827611 (Nvl)
Ribosome biogenesis [BR:
dmer03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
138827611 (Nvl)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
Nucleolin_bd
AAA_lid_3
RuvB_N
AAA_16
AAA_14
AAA_5
TIP49
AAA_22
AAA_2
AAA_33
nSTAND3
AAA_28
RNA_helicase
NPHP3_N
AAA_18
Mg_chelatase
Rad17
AAA_17
ABC_tran
NACHT
IstB_IS21
Zeta_toxin
ATPase
TsaE
AAA_3
Viral_helicase1
nSTAND_NTPase5
Parvo_NS1
Vps4_C
Hda_lid
Motif
Other DBs
NCBI-GeneID:
138827611
NCBI-ProteinID:
XP_069879368
LinkDB
All DBs
Position
Unknown
AA seq
855 aa
AA seq
DB search
MRPRSAAFVDGKLKQRVVQYLTSNRCGKYVDTGILASDLQRMYSIDYGRRKRNAFRIQVE
KVFSIINSEKELKNLTELEDEHLAKRSRQGEEDNEYSESYSDDSSNVEDHLDPQSANHMN
SSLLSLYRKGNLNSVSNTLELEHKETTTSTPRIASKTDSVSLKTPARESEKGWFIDKVPD
GKKEFFLHASDEKNIHKKPVSDIQASKYSSILEADKKKSRLKVKGIKRKKEDLQEVDEEI
IAVLQKKAKVRGLELQSSNVKFEDVGGNDSTLKEICKILTHMCHPEVYHYLGVVPPRGVL
LHGPPGCGKTLLAHAIAGELDLPILKVAAPEIVSGVSGESEQKLRDLFEQAVSNAPCIVF
FDEIDAITPKREVASKDMERRIVAQLLTCMDDLNNMAPTVRVLVIGATNRPDSLDPALRR
AGRFDREICLGIPDETSRERILQTLCRKMRLPETFSFSHLAHLTPGFVGADLMALCREAA
MCAVSRVLLKLQEQQKKDLEIEGLSSEGGQEERRVRTESNSDAQDELHRLLVLLKEQDFL
SEEQMQGLCVELNDFIVALAMVQPSAKREGFVTVPNVTWADIGALEDIREELSMAILAPV
RNPDQFRALGLVTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESER
AVRQVFQRAKNSAPCVIFFDEVDALCPRRSDRETGASVRVVNQLLTEMDGLESRQQVFIM
AATNRPDIIDPAILRPGRLDKTLFVGLPSPADRLAILKTITKDGTKPPLGQNVNLQAIAG
DPRCGCYSGADLSALVREAALCALRQEMARQKSGNGTGELKISHMHFEEAFKKVKPSISA
KDQMMYKTLQQSLSR
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atgcggccccgctctgcggcgttcgtggacggtaagctcaagcagcgtgtggtccagtac
ctcaccagtaatagatgtggcaaatatgtggacaccggaatcttagcatccgatttgcag
agaatgtacagtatagactatggccgtagaaaaagaaatgcttttaggattcaggtagaa
aaagtgttcagtataattaatagtgagaaagaacttaagaatctaacagaattagaagat
gaacacttggcaaaaagatcaagacaaggtgaagaggataatgagtattctgaaagctat
tctgatgatagttcaaatgtggaagatcacctggatccacagtcagccaatcacatgaac
agttccttgctgtctttatatcggaaaggaaatctcaattctgtttcaaatactctggag
ttggagcacaaggagaccaccacttcaacaccacgaatagcctctaaaactgattccgtt
tctttgaagactcctgccagagaatctgagaaaggatggtttattgacaaagttccagat
ggaaagaaagagtttttcttgcatgcatcagatgagaaaaatattcataagaagccagtg
tctgatatacaggcttcaaaatattcttctatcttggaggctgataaaaaaaaaagtagg
ctaaaggtcaaaggaatcaaaagaaagaaagaggatcttcaagaagtagatgaagaaata
atagctgtcttacaaaagaaagctaaagtcaggggactggaattacagagctccaatgtg
aagtttgaagatgttggaggcaatgattcaacattaaaagaaatctgcaagatacttacc
catatgtgtcacccggaagtgtaccactacctgggtgttgtgcctcctcgtggagttctc
cttcatgggccacccggctgtgggaagacattacttgcacatgccattgctggggaactt
gacctcccaattttaaaagtggctgctccagagattgtgtcaggagtttctggagaatct
gaacaaaagctcagagacttatttgaacaagctgtgtcaaacgcaccctgtattgttttc
tttgatgaaattgatgctattacccccaaaagagaagttgcttcaaaagatatggaacgc
agaattgtagcccagcttctaacctgcatggatgatctgaataatatggcacctacagtt
cgtgttctagtcattggagctactaaccggccagactcattagaccctgctttgagacgt
gcaggaaggtttgaccgagaaatatgcttgggtatcccagatgaaacgtccagagaaaga
atacttcaaactttatgccgaaaaatgagacttccagaaacgttcagtttcagtcactta
gcccacttaacaccgggctttgttggagcagatttgatggcactgtgccgagaagcagcc
atgtgtgcagtcagtagggtcttgctgaagctacaagagcagcagaagaaagatcttgag
attgaaggtttgtcatctgaaggaggccaggaggaaagacgagtcagaacagagtctaat
tctgacgcacaggatgagttgcacaggctgctggtgttgctaaaagagcaagatttcctc
tcagaggagcagatgcaaggactgtgcgttgaactgaatgacttcattgttgctctagcc
atggtccagccctctgctaaaagagaaggttttgttaccgtccctaacgtgacatgggct
gatattggtgccctggaagatattagagaagagctcagcatggcaatattggcaccagta
cggaacccagatcagttcagagctcttggattggtgactccagctggagtcctcctggca
ggtcctcctggctgtgggaaaactttgctggctaaggctgtggcaaatgagtctggacta
aattttatatctgtcaagggtcctgaattgctaaatatgtatgttggtgagagtgaacgt
gccgtccgacaggtttttcaacgggccaagaactcagcaccctgtgtgatattctttgat
gaagtggatgctttatgtccccgtagatcagaccgagagacaggtgcaagtgtccgagtg
gtaaatcagctgcttacagagatggatggtttagaatctcgccaacaagtttttattatg
gcagctactaatagaccagatatcattgatcctgcaattctgcgcccaggccgcttggat
aaaacactctttgtgggtttgccatccccagcagatcggcttgccattttaaaaactatt
acaaaagatggcaccaaacctccactgggtcaaaacgtaaacttgcaagctattgctggt
gatcctcgctgtggttgctattcgggtgcagacctctctgccttggtacgagaagctgct
ctgtgtgccttgagacaggaaatggcaagacagaagagtggaaatggaacaggtgagctc
aagattagccatatgcactttgaagaagctttcaagaaagtgaaaccatctatctcagca
aaggatcaaatgatgtacaagactctgcagcagtccctaagccggtga
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