Dipodomys merriami (Merriam's kangaroo rat): 138828060
Help
Entry
138828060 CDS
T11079
Symbol
Pex6
Name
(RefSeq) peroxisome biogenesis factor 6
KO
K13339
peroxin-6 [EC:3.6.4.-]
Organism
dmer
Dipodomys merriami (Merriam's kangaroo rat)
Pathway
dmer04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
dmer00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
138828060 (Pex6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dmer04131
]
138828060 (Pex6)
Membrane trafficking [BR:
dmer04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
138828060 (Pex6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
DPBB_PEX6
PEX6_vert_N
AAA_lid_3
AAA_16
AAA_33
AAA_5
RuvB_N
NPHP3_N
nSTAND3
AAA_22
TsaE
TIP49
Vps4_C
RNA_helicase
AAA_25
AAA_11
PEX6_4th
Mg_chelatase
DUF815
AAA_28
IstB_IS21
AAA_14
Parvo_NS1
Motif
Other DBs
NCBI-GeneID:
138828060
NCBI-ProteinID:
XP_069879819
LinkDB
All DBs
Position
Unknown
AA seq
980 aa
AA seq
DB search
MALAVLRVLDPFPAETPPLSVLLPPGGPWPAAGLGLVLALRPADESPAGPALLVAALEGP
GAGAGEQGPGPPQLLVSRALLRLLALGSGARVRARPVRRPPALGWALLGACPGPGLGPRV
GPLLVRRGETLPVPGPRVLETRPALQGLLGPGTRLAVTELRGKARLGLESGDGSRPPPPP
IASSFAVSDTVRQLRGVLGGTGDSLGVSRSCLRSLGLFQGEWVWVARAGESASNASQPHL
AKVQVLEPRWDLCERLGPGSGQLAEPIADGLVHVPATLAFNLGCDPLEVGELRIQRYLEG
FITPGDKGSCSLLPGPPFARELHIEIVSSPHYSVNGNYDRVLYQHFQTPRVVQEGDVLCV
PTVGQVEILEGSLEKLPRWREMFFKVKKTVGEASGGQTSAYLADTTHTSLYTVGSTLSAV
PALSLERSVWCSLSPPGLEALVTELCTILKPRLQPGGALLTGTGRVLLRGSPGSGKATAV
AAACSRLGLHLLKVPCSSLCADSSGATESKLQAAFSGARRCRPAVLLLTAVDLLGRDRDG
LGEDARVVATLRHLLLDEDPLSSCPPLMVVATTSWAQNLPADVQTAFPHELEVPVLSEGQ
RLSVLQALTARLPLGQEVNLAQLARRCAGFVVGDLCALVTHSSRAACTRIKNSGSAGDLS
EEDERDLCLAGFPLLAEDFGQALERLQAAHSQAVGAPKIPSVSWHDVGGLQEVKKEILET
IQLPLEHPELLSLGLRRSGLLLHGPPGTGKTLLAKAVATECSLTFLSVKGPELINMYVGQ
SEENVREVFARARAAAPCIIFFDELDSLAPSRGRSGDSGGVMDRVVSQLLAELDGLHSTQ
DVFVIGATNRPDLLDPALLRPGRFDKLVFVGANEDRASQLRVLSTITRKFKLEPSVSLAS
VLDCCPPQMTGADLYSLCSDAMTAALKRRVHDLEEGRETRGSALLLTMEDLLQAAARLQP
SVSEQELLRYTRIQRKFAAC
NT seq
2943 nt
NT seq
+upstream
nt +downstream
nt
atggcgctggccgtcctgcgggtcctggatcccttcccggccgagacaccgccgttgtca
gtgctgctgcctcctgggggcccgtggcctgcggcggggctgggcttggtgctggccctg
cggcctgcagacgagagtccggcaggcccggcgctgctggtggcggccttggagggcccg
ggtgcgggagccggggagcagggtcccgggcccccgcagctgctggtgagccgcgcgctg
ctgcggcttctggcactgggctccggcgcgcgggtgcgggcgcggcccgtgcggcgaccc
ccggcgctcggctgggcgctgcttggcgcctgcccggggcccgggctcgggccgcgcgtc
ggaccgctgctggtgaggcgtggggagaccctgccggtgcccgggccgcgcgtgttggaa
acgcggccggcgctgcaagggctgctgggccccgggacgcgactggccgtcaccgagctc
cgcggaaaagccagattggggctggagagcggagacggcagccggcccccacccccgcct
atagcatcctcctttgcagtttccgacacagtccggcaactccggggagtgctaggaggg
actggagattccctaggggtgagccggagttgtctccgtagtctcggcctcttccagggt
gaatgggtgtgggtggcccgggccggagagtcagcatcgaacgcttcccaaccgcacctg
gccaaggtgcaggtcctagagcctcgctgggacctctgtgagagactgggacctggctct
gggcagctggcagagccgatcgctgacggactggtacacgtgcctgccactctggctttt
aatctcggctgtgaccccttggaagtgggagagctcagaattcagaggtacttggaaggc
ttcatcaccccaggggacaaaggaagctgctcactgttgcctgggcctccgtttgccaga
gagttacacatcgaaatcgtgtcctctccccactacagcgttaatgggaactatgaccgt
gttctttaccagcactttcagacacccagggtggtccaggaaggggatgttctatgtgtg
ccaacagttgggcaagtagagatcctggaaggaagtctggagaaactgcccaggtggcgt
gagatgttttttaaggtgaagaagacagttggggaagcctcaggtgggcaaaccagtgcg
tacttggccgacaccacccatacctccttatacacggtgggttctaccttgagcgctgtt
ccagcgctgtctttagaaagatctgtctggtgcagcttgtctcctccaggcctggaggcc
ttggtgactgagctctgcaccatcctgaagcctcgcctccagcctgggggggccttgctg
acgggaactggccgtgtccttctgcggggatccccgggcagtgggaaggccacagcagtg
gctgctgcctgcagtcgccttgggctccacttactcaaggtgccctgctccagcctctgt
gccgatagcagtggggccacagagtcaaagctgcaggcggccttctccggggcccgccgc
tgcaggcctgcggtcctcttgctgacagctgtggaccttctgggccgggaccgtgatggg
ctgggtgaggatgcccgcgtggtggccacgctacgccacctcctcctcgatgaggaccca
ctcagcagctgccctcccctgatggtcgtggccaccacgagctgggcgcagaacctgccc
gcagacgtgcagacggcgtttcctcacgagctggaggtgccggtgctgtcggaggggcag
cggctcagcgtcctgcaagccctcacggcccgcctccccctgggccaggaggtgaacctg
gcgcagctggcacgccgctgtgcaggctttgtggtgggggatctctgtgcccttgtgacc
cacagcagccgggcagcctgcacccggatcaagaactcaggttcggcgggcgacctgagt
gaggaagatgagcgggatttgtgtctcgccggctttcccctcctggctgaggacttcggg
caggcgctggagcgcctgcaggcagctcactcccaggctgtgggcgcacccaagatcccc
tccgtgtcctggcatgatgtgggcgggctgcaggaggtgaagaaggagattctggagacc
atccagctccctctggagcaccccgagctgctgagcctgggcctgaggcgctcgggcctt
ctgctccacgggcccccgggcacgggcaagacgctcctggccaaggcagtggccaccgag
tgcagcctcaccttcctcagtgtgaaggggccagagctcatcaacatgtacgtgggccag
agcgaggagaatgtacgagaagtatttgccagggccagggctgctgctccctgcatcatc
ttctttgatgaactggactccttggccccaagccgggggcgaagtggagactctggaggg
gtgatggacagggtggtgtctcaactcctggctgagctggacgggcttcacagcactcag
gacgtgtttgtgatcggagccaccaacaggccggacctcctggaccctgcccttctgcgg
cctggcaggtttgacaagctggtgttcgtgggggcgaatgaggaccgcgcctcccagctg
cgtgttttaagcaccatcacacgcaaattcaagctggagccctcggtgagcctggcgagc
gtgctggattgctgccctccccagatgaccggtgcggacctctactctctctgctctgat
gccatgacagccgccctcaagcgcagggtccatgacctggaggaagggcgggagactagg
ggctcagcactgctgctcaccatggaggacctgctgcaggccgctgcccgcctgcagccc
tcagtgagcgagcaagagctgctgcggtacacgcgcatccagcgcaagttcgccgcctgc
tag
DBGET
integrated database retrieval system
