Dipodomys merriami (Merriam's kangaroo rat): 138828175
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Entry
138828175 CDS
T11079
Symbol
Rxrb
Name
(RefSeq) retinoic acid receptor RXR-beta isoform X1
KO
K08525
retinoid X receptor beta
Organism
dmer Dipodomys merriami (Merriam's kangaroo rat)
Pathway
dmer03320
PPAR signaling pathway
dmer04659
Th17 cell differentiation
dmer04919
Thyroid hormone signaling pathway
dmer04920
Adipocytokine signaling pathway
dmer04928
Parathyroid hormone synthesis, secretion and action
dmer05200
Pathways in cancer
dmer05202
Transcriptional misregulation in cancer
dmer05207
Chemical carcinogenesis - receptor activation
dmer05216
Thyroid cancer
dmer05222
Small cell lung cancer
dmer05223
Non-small cell lung cancer
dmer05226
Gastric cancer
dmer05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
dmer00001
]
09150 Organismal Systems
09151 Immune system
04659 Th17 cell differentiation
138828175 (Rxrb)
09152 Endocrine system
04920 Adipocytokine signaling pathway
138828175 (Rxrb)
03320 PPAR signaling pathway
138828175 (Rxrb)
04919 Thyroid hormone signaling pathway
138828175 (Rxrb)
04928 Parathyroid hormone synthesis, secretion and action
138828175 (Rxrb)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
138828175 (Rxrb)
05202 Transcriptional misregulation in cancer
138828175 (Rxrb)
05207 Chemical carcinogenesis - receptor activation
138828175 (Rxrb)
09162 Cancer: specific types
05226 Gastric cancer
138828175 (Rxrb)
05216 Thyroid cancer
138828175 (Rxrb)
05222 Small cell lung cancer
138828175 (Rxrb)
05223 Non-small cell lung cancer
138828175 (Rxrb)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
138828175 (Rxrb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dmer03000
]
138828175 (Rxrb)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
dmer03310
]
138828175 (Rxrb)
Transcription factors [BR:
dmer03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
138828175 (Rxrb)
Nuclear receptors [BR:
dmer03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
138828175 (Rxrb)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Nuc_recep-AF1
Motif
Other DBs
NCBI-GeneID:
138828175
NCBI-ProteinID:
XP_069880101
LinkDB
All DBs
Position
Unknown
AA seq
522 aa
AA seq
DB search
MSWAARPPFLPERHAAGQCGPVGVRKEMHCGVASRWRRRRPWLDPAAAAAAAAAGEQQTP
EPEPGEAGRDGMGDSGRDSRSPDSSSPNPLPQGIPPPSPPGPPLPPSAPPPPMPPPPLGS
PFPVISSSMGSPGLPPPAPPGFSGPVSSPQINSTVSLPGGGSGPPEDVKPPVLGVRGLHC
PPPPGGPGAGKRLCAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYSCRDNKDCTVDK
RQRNRCQYCRYQKCLATGMKREAVQEERQRGKDKDGDGEGAGGAPEEMPVDRILEAELAV
EQKSDQGVEGPGGTGGSGSSPNDPVTNICQAADKQLFTLVEWAKRIPHFSSLPLDDQVIL
LRAGWNELLIASFSHRSIDVRDGILLATGLHVHRNSAHSAGVGAIFDRVLTELVSKMRDM
RMDKTELGCLRAIILFNPDAKGLSNPSEVEVLREKVYASLETYCKQKYPEQQGRFAKLLL
RLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQLA
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgtcttgggccgcccgccctcccttcctccccgagcggcatgccgcagggcagtgtggg
ccggtgggggtgagaaaagaaatgcattgtggggtcgcgtcccggtggcggcggcggcgg
ccctggctggatcccgcggcggcagcggcggcggcagcagccggagaacaacaaaccccg
gagccggagccgggggaggctggacgggacgggatgggcgacagcgggcgggattccaga
agcccagacagctcctccccaaacccccttccccagggaatcccacccccttctcctcct
ggaccacctttgcccccttcagcacccccacccccaatgccaccacctccactgggctcc
cctttcccagtcatcagttcttccatggggtcccctggtctgccccctccagctccccca
ggattttccgggcctgtcagcagcccccagattaactcaacagtgtcgctccctgggggt
gggtctggcccccctgaagatgtgaagccaccagtcttaggggtccggggcctgcactgt
ccaccccctccaggtggccctggggctggcaaacggctatgtgcaatctgcggggaccga
agctcaggcaaacactatggggtttacagctgtgaggggtgcaagggcttctttaagcgc
accatccgtaaggacctcacctactcgtgccgggacaacaaagactgtacagtggacaag
cgccagcgaaaccgttgtcagtactgccgctatcagaagtgtttggccactggcatgaag
agggaggcggtacaggaggagcgtcagcggggaaaggacaaggacggggatggggaaggg
gctgggggagcccctgaggagatgcctgtggacaggatcctggaggcagagcttgctgtg
gagcagaagagtgaccagggcgttgagggtcctgggggcaccgggggtagcggcagcagc
ccaaatgaccctgtgactaacatctgtcaggcagctgataaacagctattcacgcttgtt
gagtgggcgaagaggatcccacacttttcctctctgcctctggatgaccaggtcatattg
ctacgggcaggctggaatgagctcctcattgcttccttctcccaccggtccattgatgtc
cgagatggcatcctcctcgccacaggtcttcatgtgcaccgcaactcagcccattccgca
ggcgtgggagccatctttgatcgggtgctgacagagctagtgtccaaaatgcgtgacatg
aggatggacaagacagagcttggctgcctgcgggcaatcattctgtttaatccagatgcc
aagggcctctccaatcccagtgaggtagaagtccttcgagagaaagtgtatgcatcactg
gagacctactgcaaacagaagtaccctgaacagcagggacggtttgccaagctgctgcta
cgtcttcccgccctccggtccatcggccttaaatgtctagagcatctgtttttcttcaag
ctcattggtgacacccccattgacactttcctcatggaaatgctggaggctcctcaccag
ctggcctga
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