Dipodomys merriami (Merriam's kangaroo rat): 138828417
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Entry
138828417 CDS
T11079
Symbol
Nup153
Name
(RefSeq) nuclear pore complex protein Nup153 isoform X1
KO
K14296
nuclear pore complex protein Nup153
Organism
dmer Dipodomys merriami (Merriam's kangaroo rat)
Pathway
dmer03013
Nucleocytoplasmic transport
dmer03250
Viral life cycle - HIV-1
dmer05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
dmer00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
138828417 (Nup153)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
138828417 (Nup153)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
138828417 (Nup153)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dmer03019
]
138828417 (Nup153)
Messenger RNA biogenesis [BR:
dmer03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
138828417 (Nup153)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup153
Zn_ribbon_RanBP
Nup_retrotrp_bd
Motif
Other DBs
NCBI-GeneID:
138828417
NCBI-ProteinID:
XP_069880607
LinkDB
All DBs
Position
Unknown
AA seq
1465 aa
AA seq
DB search
MASGAGGIGGGGGGKIRTRRCHQGPIKPYQQGRPQHQGILSRVTESVKNIVPGWLQRYFN
KNENACSCSSDANEVPHWSENRDNDRMIYADEERSNINDGRITPEPAVGNTEESSTTNTA
SNYPDVLTRPSLHRSHLNFSMLETPALHCQPSTSSAFPIGSSGFSLVKEIKDSTSQHDDD
NISTTSGFSSRASDKDIAVSKNTSLPPLWSPEAERSHSLSQHTATSSKKPAFNLSAFGTL
SPSLGNSSVLKASQLGDSPFYPGKTTYGGAAAAARQSKLRNTPYQAPVRRQMKAKQLNAQ
SYGVTSSTARRILQSLEKMSSPLADAKRIPSAVSSLNFPFNRSGMDTTVFQAKTEKVDSQ
YPPVQRLMTPKPVSIATNRTVYFRPSLTPSGELRKTNERIDKKHSTIYEKSTTSRQNREH
ESGFSYPNFSIPAANGISSGAGCGGGKMRRERTRFVASKPPEEEEMEVPVLPKISLPITS
SSLPTFNFSSPVNTTSSPSPISPPQSLTNKVQMTSPGSTGSPMFRFSSPIVKSTEADVLL
PPPSIGFTFSVPVAKTELSGSGSTSEPIRSTSAPDNIASNNTSTSCKKRDEEYEGPFRPA
KIQKEGSVLDILKNPGFASPKVDSFAAQPTTTSPVVYTRPAISTFSSSGTGFGESLKAGS
SWQCDTCLVQNKVTDNKCIACQAAKLPPRETAKQSGNGTSSKSGKATPLSGTGFGDKFKP
AMGTWDCDTCLVQNKPEAVKCVACETPKPGTGVKRVLTLTVVSESPETVTASTSSCTVAT
GSLGFGDKFKRPVGSWECPVCCVSNNSEDNKCVSCMSEKPGSSVPVSSSSAVPVSLSSGG
CLGLDKFKKPEGSWDCEVCLVQNKADSTKCVACESAKPGMKSEFKGFGGTSSPSLNPAAS
SFKFGISSSGPSQTLTSTGNFKFGDQGAFKIGVTSDSGSVNSMNESFKFSKPTGDFKFGI
SSDSKPEEVKKDSQTDNNFKFGLCSGLSNPVSSAPFQFAVASLGQQEKKEELPKSSSSGF
SFGTGTGVSNPTPAATDTAVTSESKSTFSFGTLETKNVSVSPFTCKTEAKKEEMPATKAG
FTFGSMESASLPSASVFALGRTEEKQQEPVTSTSLVFGKKADNQEPKCQQVFSFGNSEQT
KDESSSKSTFSFSMVKPPEKESEQPTKSTFAFGAQTSTTADQGASKPVFNFLNNSSSSSS
TPTTSAGGGIFGSSTSSSNPPVAAFVFGQASNPVSSSAFGNSAESSTSQSLLFSQDSKPA
TTSSTGSAVTPFVFGPGASSNNTATSGFSFGATTASSTAGSSFVFGSAPSAPSASPAFGA
NQTPTFGQTQGASQPNPPSFGSISSSTALFPASSQPAPPTFGTVSSSSQPPVFGQQPSQS
AFGSGSAPNSSSVFQFGSSTTNFNFTFGANPSTPAASAQPSGSGGFAFNQSSAAFTVGSN
GKNLFSSSGTSVSGRKIKTAVRRRK
NT seq
4398 nt
NT seq
+upstream
nt +downstream
nt
atggcctccggagccggaggaataggagggggcggtggcggcaagatccggacgcggcgc
tgccaccaggggccaattaagccttaccagcaggggcgaccacagcaccagggcattctt
agtagagttacagaatctgttaagaacattgtgccaggttggctacaaagatacttcaac
aagaatgaaaatgcatgtagctgttcatcagatgcaaatgaagtaccacactggtcagaa
aatcgagacaatgaccgtatgatctatgctgatgaggaaagatctaatattaatgatggg
agaatcacccctgagccagcagttggcaatacagaagaatcatcaacaaccaatactgct
tcaaattatccagatgtattaacaaggccttctcttcatcggagtcacttgaatttctcc
atgttggaaacccctgcattacactgtcagccatctacatcctctgcatttccaattggc
agttctggattttcccttgtaaaggaaattaaagattctacctctcagcatgatgatgat
aacatctcaaccaccagtggtttttcttcaagagcttctgataaagatatagcagtttca
aagaacacttccttgccacctctgtggtccccagaagctgaacgttctcattcactctca
cagcatactgccaccagctcaaaaaaaccagcatttaacttgtctgcctttggaacactg
tccccttcacttgggaattcttcagttcttaaagcaagtcagcttggagattctcctttc
tatccaggaaaaacaacgtatggtggggcagcagcagctgcaagacagtccaaactacga
aatacaccttatcaggcaccggttagaagacagatgaaagctaagcaacttaatgcacaa
tcttacggtgtgaccagttccacagctcgacgaatattgcagtctttagagaagatgtca
agccctctagcggatgcaaaaagaattccatctgctgtttcttctctcaattttcctttc
aatagaagtgggatggataccacagtctttcaggccaaaacagaaaaggtggactctcag
tatccccctgttcagagactcatgaccccgaagccagtttccatagcaacaaatagaact
gtctattttagaccatctctaaccccatctggtgaattaaggaagactaatgaaaggata
gataaaaagcacagtactatatatgaaaaaagtacaacatcaaggcaaaatagagaacac
gaaagtggcttttcgtacccaaatttcagtattccagcagccaatggtatatcatctgga
gcaggttgtggaggtggcaagatgagacgagagagaacacgctttgttgcttccaagcct
ccagaggaagaggaaatggaagtaccagtgttaccgaaaatctctctaccaattaccagt
tcttcacttcctaccttcaattttagctctcctgtgaatacaacttcctctccctcaccc
atcagtcctcctcaatcattgacaaacaaggtacaaatgacctccccaggcagcactggc
agtcctatgtttagattttcatctccaattgtaaaatctactgaggcagatgtactacta
cctccaccatctattggatttacatttagtgtgcctgttgcaaaaacagaactttctggc
tctggtagtacttcagaaccaattagaagtacttcagctccagataacattgcatcaaat
aatacaagtacaagctgtaagaagcgagacgaagaatatgagggtccttttagacctgcc
aaaatccagaaagaaggaagtgttctagatattctgaaaaaccctggttttgcatcacca
aaggtagattcttttgctgctcaacctactactacaagtccagtagtttatacaagacca
gcaataagtaccttttcttctagtgggactggatttggagaaagtttaaaagctggatcc
tcctggcagtgtgacacatgtcttgtccagaacaaagtaacagacaataagtgtatagct
tgccaagcagcaaaattgccaccaagagaaactgctaaacagtctggaaatgggacatca
agcaaaagtggcaaagcaactcctctatcagggacaggctttggagacaaatttaaacca
gcgatgggaacctgggactgtgatacctgtttggtgcaaaacaaacctgaagcagtaaaa
tgtgttgcctgtgaaacaccgaagcctggaactggtgtgaagcgagtccttacattgaca
gtggtttcagaaagtcctgaaacggtgactgcttcgacttccagctgtactgtggccact
ggtagcttaggattcggagataaattcaaaaggcctgtgggatcttgggagtgtccagtg
tgctgtgtttctaataattcagaagacaacaaatgtgtgtcttgtatgtctgagaaacct
ggaagttcagtaccggtttcaagtagcagtgctgtacctgtctctttgtcatctggaggc
tgtctgggattggacaagttcaaaaagcctgagggcagctgggactgtgaagtgtgccta
gtgcagaataaagcagactccactaaatgtgtagcatgtgaaagtgcaaagccaggcatg
aaatcagagtttaaaggctttggaggtacatcatccccatctttgaacccagcagcttca
tccttcaaatttggtatctcatcttctgggccttctcagaccttaacaagcactggaaat
tttaaatttggagatcagggagcatttaaaataggtgttacatctgactcggggtctgtt
aactccatgaatgaaagctttaaattttctaaaccaactggagattttaaatttggaatt
tcatctgattctaaacctgaagaagttaagaaagacagtcagactgataacaattttaaa
tttggactttgttctggtttaagcaaccctgtttcttcagctccatttcagtttgcagtg
gctagccttgggcagcaggaaaagaaagaggaattacctaaatcttcatcttcaggcttt
agctttggtactggtactggtgttagtaaccccacccctgctgctactgacactgcagtg
acctctgagagcaagagcaccttcagctttggaaccctagaaaccaagaatgtctcagtg
tctcctttcacatgtaaaacagaagcaaaaaaagaagagatgcctgccaccaaggcaggg
ttcacttttggcagtatggaatctgcctctctaccatctgcctcagtatttgctttggga
aggacagaagagaagcaacaagagcctgtcacttctacttctctagtgtttgggaaaaaa
gctgacaaccaggagccaaagtgtcaacaagtattttcctttgggaattcagaacaaacc
aaagatgagagttcttcaaaatcaacatttagtttcagtatggtaaaaccacctgagaag
gaatcagaacagccaactaaatccacttttgcctttggagctcaaaccagtactacagct
gatcaaggtgcatcaaaaccagtttttaacttcttgaacaacagttcctctagttcaagt
accccaactacttcagcaggtggaggcatatttggtagttccacatcttcctccaaccca
cctgtggctgcctttgtgtttggacaggccagcaatcctgtgagcagctctgcctttggt
aactctgctgaatccagtacatctcagtctttgctattttctcaggatagcaaaccagct
actacatccagcacaggttcagctgtcaccccatttgtctttggaccaggagccagcagt
aacaacactgcaacctctgggttcagctttggagccacaactgcttctagtactgcagga
tcctcctttgtgtttggtagtgcaccttcagcaccatctgccagtccagcatttggtgct
aaccagacccctacgtttggacaaactcaaggtgccagccagcctaatcctccaagcttt
ggatctatatcatcttcaacagcattgtttcctgctagttctcagcctgcaccacctact
tttggaacagtatcaagcagtagccagcctcctgtgtttggacaacagcctagtcaatct
gcatttggctctggttcagctcctaattccagttctgtattccaatttggcagcagcact
acaaatttcaacttcacatttggtgcaaatcccagtacacctgcagcctcagcccagcct
tcaggctctgggggctttgcatttaaccagtcttcagcagcatttactgtggggtcaaat
gggaaaaatttgttctcctcttctggaacttcagtttctggtcgcaagataaagactgct
gttagacgtaggaaataa
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