Dipodomys merriami (Merriam's kangaroo rat): 138828422
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Entry
138828422 CDS
T11079
Symbol
Atxn1
Name
(RefSeq) ataxin-1
KO
K23616
ataxin-1
Organism
dmer Dipodomys merriami (Merriam's kangaroo rat)
Pathway
dmer04330
Notch signaling pathway
dmer05017
Spinocerebellar ataxia
dmer05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
dmer00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
138828422 (Atxn1)
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
138828422 (Atxn1)
05022 Pathways of neurodegeneration - multiple diseases
138828422 (Atxn1)
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Paralog
GFIT
Motif
Pfam:
ATXN-1_C
AXH
Motif
Other DBs
NCBI-GeneID:
138828422
NCBI-ProteinID:
XP_069880616
LinkDB
All DBs
Position
Unknown
AA seq
806 aa
AA seq
DB search
MKSNQERSNECLPPKKREIPATSRPSEEKVTAPPSDNHRADGPAAVAAAAAWLPGHPPGS
RGPGGGRHGPVGPSTELGLQQGIGLHKALSTGLDYSPPSAPRSVPSATTLPAAYPPPQSG
TPVSPVQYAHLPHTFQFMGSSQYSGPYAGFLPSQLISPSANPVTSTVATAGGATTPSQRS
QLEAYSTLLANVGGLSQAAGHKIEPQQPPPPPQQHLGRTPGHLTPGSPPPPPQNQYVHIS
SSPQSAGRTASPPAIPVHLHAHQAMIPHTLTLGPSSQVVVQYGGGDPGGHHFVPREPSKK
DGGGGGGSSRLPQAKEVLNGEMEKGRRYGAPASADLGLGKAGSKSLPHPYEPRHVVVHPS
PADYSSRDPPGVRASVMVLPNSSSTPASDLEAQQAAAHREASPSALNDKSGLHLGKAGHH
HRSYALSPHTVIQTTHSASEPLPVGLPATAFYAGTQPPVIGYLSGQQQAITYAGSLPQHL
VIPGTQPLLIPVGSPDMDTPGAASAIVTTSPQFVTTALPKSDNFNPEALVTQAAYPAMVQ
AQIHLPVVQSVASPAAVPPTLPPYFMKGSIIQLANGELKKVEDLKTEDFIQSAEISNELK
IDSSTVERIEDSHSPGVAVIQFAVGEHRAQVSVEVLVEYPFFVFGQGWSSCCPERTSQLF
DLPCSKLSVGDVCISLTLKNLKNGSVKKSQPVDPASVLLKHAKPDSLVGSRHRYAEQENG
INPGSTQVLSENGELKFPERTGLPAASFLTKTEPSKPTATRKRRWSAPETRKLEKSEDEP
PLTLPKPSLIPQEVKICIEGRSNVGK
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgaaatccaaccaggagcggagcaatgaatgcctgcctcccaagaagcgcgagatcccc
gccaccagccggccctcggaggagaaggtcaccgccccgcccagcgacaatcaccgggcg
gacggcccggcagcggtggcggcggcggccgcgtggctccccggccaccctccgggcagc
cggggcccagggggagggcggcacgggccggtggggccttccaccgagcttggtttacaa
cagggaataggtttacacaaagcactgtccacggggctggactactccccgcccagtgct
cccaggtcggtcccctctgccaccacgctgcccgcggcctaccctccgccgcagtcgggg
accccggtgtctccggtgcagtacgcccacctgccgcacaccttccagttcatgggctcc
tcccagtacagcggaccctacgccggctttctcccttcacagttgatctccccctcggcc
aaccccgtcaccagtacggtggccacggccgggggcgccaccactccatcccagcgctcc
cagctggaggcctattccactctgctggccaacgtgggcggtctgagccaggccgctggg
cacaagatcgagccgcagcagccgccaccaccgccgcagcagcacctgggcaggaccccc
gggcacctcaccccggggtccccaccgccccccccacagaaccagtacgtgcacatctcc
agctctccgcagagcgccgggcgcacggcctcgccgccggccatccccgtccacctgcac
gcgcaccaggccatgatcccacacacgctcaccctgggcccgtcctcccaggtggtggtg
cagtacggcggcggcgaccccggcggccaccacttcgtcccccgtgagcccagcaagaaa
gacggaggcggtggcggcggcagcagcaggctgccgcaggccaaggaggtgttgaacggg
gagatggagaagggccggcggtacggggcgcccgcctctgccgacctgggattgggcaag
gcgggcagcaaatcgctcccgcacccttacgagcccaggcacgtggtggtccaccccagc
cccgcggactacagcagtcgagatccacccggggtccgcgcgtccgtcatggtcctcccc
aacagcagcagcacgcccgcatccgacctggaggcccagcaggccgcggcgcatcgcgag
gcctccccgtccgccctcaacgacaagagcggcctgcacctcgggaaggccggccaccac
caccggtcctacgcgttgtccccccacacggtcatccagaccacacacagtgcttcagag
cctctccccgtgggactgccggccaccgccttctacgcgggcactcagcccccggtcatc
ggctacctgagcggccagcagcaggcgatcacctacgcaggcagcctgccccagcacctg
gtgatccctggcacccagcccttactcatcccagtgggcagtccggatatggacaccccg
ggggcagcctccgccatcgtcaccacgtcgcctcagttcgtcaccaccgccctgcccaag
agtgacaactttaaccccgaggccctggtcacccaggctgcctacccagccatggtccag
gctcagatccacctacccgtggtccagtcggtggcctcgcccgccgcggtgccgcccacg
ctgccaccctacttcatgaaaggctccatcatccagctggccaacggggagctgaagaag
gtggaggacttgaagacggaagacttcatccagagcgcggagataagcaacgagctgaag
atcgactcgagcacggtggagaggatcgaggacagccacagccccggggtggcggtgata
cagttcgccgtcggggagcatcgggcacaggtcagcgttgaagtcttggtagagtatccc
ttcttcgtgtttggacagggctggtcatcctgctgtccagagagaacgagccagctcttt
gatttaccatgttccaaactctcagttggggacgtctgcatctcgctcaccctcaagaac
ctgaagaatggctctgttaaaaagagccagcccgtggatcctgccagcgttctgctgaaa
cacgccaagcccgacagcctggtgggcagtagacacaggtatgccgagcaggaaaacgga
attaatcccggaagtacccaggtactctctgagaacggtgaactgaagtttccagagaga
acaggattgcctgcagcatccttcctcaccaaaacagaacccagcaagcccacagccacg
aggaagaggaggtggtcagcacccgagacccgcaaactggagaagtcagaagatgagcca
cctttgactcttcccaagccttctctaattcctcaggaggttaagatctgcattgaaggc
cgctccaacgtgggcaagtag
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