KEGG   Dipodomys merriami (Merriam's kangaroo rat): 138828676
Entry
138828676         CDS       T11079                                 
Symbol
Hdac2
Name
(RefSeq) histone deacetylase 2 isoform X1
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
dmer  Dipodomys merriami (Merriam's kangaroo rat)
Pathway
dmer03082  ATP-dependent chromatin remodeling
dmer03083  Polycomb repressive complex
dmer04110  Cell cycle
dmer04213  Longevity regulating pathway - multiple species
dmer04330  Notch signaling pathway
dmer04350  TGF-beta signaling pathway
dmer04613  Neutrophil extracellular trap formation
dmer04919  Thyroid hormone signaling pathway
dmer05016  Huntington disease
dmer05031  Amphetamine addiction
dmer05034  Alcoholism
dmer05165  Human papillomavirus infection
dmer05169  Epstein-Barr virus infection
dmer05200  Pathways in cancer
dmer05202  Transcriptional misregulation in cancer
dmer05203  Viral carcinogenesis
dmer05206  MicroRNAs in cancer
dmer05220  Chronic myeloid leukemia
Brite
KEGG Orthology (KO) [BR:dmer00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    138828676 (Hdac2)
   03083 Polycomb repressive complex
    138828676 (Hdac2)
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    138828676 (Hdac2)
   04350 TGF-beta signaling pathway
    138828676 (Hdac2)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    138828676 (Hdac2)
 09150 Organismal Systems
  09151 Immune system
   04613 Neutrophil extracellular trap formation
    138828676 (Hdac2)
  09152 Endocrine system
   04919 Thyroid hormone signaling pathway
    138828676 (Hdac2)
  09149 Aging
   04213 Longevity regulating pathway - multiple species
    138828676 (Hdac2)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    138828676 (Hdac2)
   05202 Transcriptional misregulation in cancer
    138828676 (Hdac2)
   05206 MicroRNAs in cancer
    138828676 (Hdac2)
   05203 Viral carcinogenesis
    138828676 (Hdac2)
  09162 Cancer: specific types
   05220 Chronic myeloid leukemia
    138828676 (Hdac2)
  09172 Infectious disease: viral
   05169 Epstein-Barr virus infection
    138828676 (Hdac2)
   05165 Human papillomavirus infection
    138828676 (Hdac2)
  09164 Neurodegenerative disease
   05016 Huntington disease
    138828676 (Hdac2)
  09165 Substance dependence
   05031 Amphetamine addiction
    138828676 (Hdac2)
   05034 Alcoholism
    138828676 (Hdac2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:dmer03036]
    138828676 (Hdac2)
Enzymes [BR:dmer01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     138828676 (Hdac2)
Chromosome and associated proteins [BR:dmer03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     138828676 (Hdac2)
   HDAC complexes
    Sin3A-HDAC complex
     138828676 (Hdac2)
    BRAF-HDAC complex
     138828676 (Hdac2)
    REST complex
     138828676 (Hdac2)
    SHIP complex
     138828676 (Hdac2)
    MiDAC complex
     138828676 (Hdac2)
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     138828676 (Hdac2)
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    138828676 (Hdac2)
  Chromatin remodeling factors
   NuRD complex
    138828676 (Hdac2)
SSDB
Motif
Pfam: Hist_deacetyl DUF2201_N
Other DBs
NCBI-GeneID: 138828676
NCBI-ProteinID: XP_069880876
LinkDB
Position
Unknown
AA seq 488 aa
MAYSQGGGKKKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKA
TAEEMTKYHSDEYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVA
GAVKLNRQQTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHH
GDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQ
IFKPIISKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTVKGHAKCVEVVKTFNLPLLMLG
GGGYTIRNVARCWTYETAVALDCEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTPEYM
EKIKQRLFENLRMLPHAPGVQMQAIPEDAVHEDSGDEDGEDPDKRISIRASDKRIACDEE
FSDSEDEGEGGRRNVADHKKGAKKARIEEDKKEAEDKKADVKEEDKSKEGSGEKTDTKGA
KSEQLSNP
NT seq 1467 nt   +upstreamnt  +downstreamnt
atggcgtacagtcagggaggcggcaagaagaaagtctgctactattacgatggtgatatt
ggaaattattattatggacagggtcatcccatgaaaccacacagaattcggatgactcat
aacttgctgttaaattatggtttatacagaaaaatggaaatatataggccgcataaagcc
actgctgaagaaatgacaaagtatcacagtgatgagtatatcaaatttctgcggtcaata
agaccagataatatgtctgagtatagtaagcagatgcagagatttaatgttggagaagat
tgtccagtgtttgatgggctctttgagttttgtcaactctccactggtggttcagttgct
ggggctgtgaagttgaaccgacaacaaactgatatggctgtcaactgggctggaggatta
catcatgccaagaaatcagaagcatcaggattctgttatgtgaatgatattgtgcttgct
atccttgaattactcaagtatcatcaaagggtcttgtatattgatatagatatccaccat
ggtgatggtgttgaagaagcattttatacaacagatcgtgtgatgactgtttccttccac
aagtatggggaatactttcctggcacaggagacttgagggatattggtgctggaaaaggc
aaatattatgctgtcaattttcctatgagagatggtatagatgatgagtcgtatgggcag
atatttaagcctatcatctcaaaagtgatggagatgtatcaacccagtgctgtggtattg
cagtgtggtgcagattcattatctggtgatagacttggttgcttcaacctaacagtcaaa
ggtcatgctaaatgtgtagaagttgtgaaaactttcaacttaccattgttaatgcttggg
ggaggtggatacacaatccgtaacgttgcacgatgctggacatatgagacggcggttgcc
cttgattgtgagattcccaatgagttgccatataatgattactttgagtattttggaccg
gacttcaaactgcatattagtccttcaaacatgacaaaccagaacactccggaatatatg
gagaagataaaacagcgtttatttgaaaatttgcgcatgttacctcacgcacctggtgtc
caaatgcaagctatcccagaagatgctgttcatgaagacagtggagatgaagatggagaa
gatcctgataagagaatttcaattcgagcatctgacaaacggatagcttgtgatgaagaa
ttctcagattctgaggatgaaggagaaggaggacgtagaaatgtagctgatcataagaaa
ggagcaaagaaagctagaattgaagaagacaagaaagaagcagaagacaaaaaagcagat
gttaaagaagaagataaatccaaggaaggtagtggtgaaaagacagataccaaaggagcc
aagtcagaacaactcagcaacccttga

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