Dipodomys merriami (Merriam's kangaroo rat): 138828739
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Entry
138828739 CDS
T11079
Symbol
Sbno1
Name
(RefSeq) protein strawberry notch homolog 1 isoform X1
KO
K26273
protein strawberry notch
Organism
dmer Dipodomys merriami (Merriam's kangaroo rat)
Brite
KEGG Orthology (KO) [BR:
dmer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dmer03036
]
138828739 (Sbno1)
Chromosome and associated proteins [BR:
dmer03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
138828739 (Sbno1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
SBNO
ResIII
Helicase_C
Motif
Other DBs
NCBI-GeneID:
138828739
NCBI-ProteinID:
XP_069880940
LinkDB
All DBs
Position
Unknown
AA seq
1393 aa
AA seq
DB search
MVEPGQDLLLAALSESGISPNDLFDIDGGDAGIATPTPTTPVQQSVPFSPLELGLETEAA
VPVKQEPEAVPTPALLNVRQQPPSTTTFVLNQINQLPALGSTIVMTKTPPVTTNRQTITL
TKFIQTTANTRPSISAPVVRNAMTSAPSKDQVQLKDLLKNNSLNELMKLKPPANIAQPVA
TAATDVSNGAVKKESSNKEVARIWINDMKMRSFSPTMKVPVVKEEDEPEEEDEEEMGHAE
TYAEYMPIKLKIGLRHPDAVVETSSLSSVTPPDVWYKTSISEETIDNGWLSALQLEAITY
AAQQHETFLPNGDRAGFLIGDGAGVGKGRTIAGIIYENYLLSRKRALWFSVSNDLKYDAE
RDLRDIGAKNILVHSLNKFKYGKISSKHNGSVKKGVIFATYSSLIGESQSGGKYKTRLKQ
LLHWCGDDFDGVIVFDECHKAKNLCPVGSSKPTKTGLAVLELQNKLPKARVVYASATGAS
EPRNMAYMNRLGIWGEGTPFREFSDFIQAVERRGVGAMEIVAMDMKLRGMYIARQLSFTG
VTFKIEEVLLSQSYVKMYNKAVKLWVIARERFQQAADLMDAEQRMKKSMWGQFWSAHQRF
FKYLCIASKVKRVVQLAREEIKNGKCVVIGLQSTGEARTLEALEEGGGELNDFVSTAKGV
LQSLIEKHFPAPDRKKLYSLLGIDLSAPSNNSSPRDSPCKENKIKKRKGEEITREAKKAR
KVGGLAGSSSDDSGSESDASDNEESDYESSKNMSSGDDDDFNPFRDESSEDDEDDPWLIR
KDHKKSKDKKKKKSIDPDSIQSALLASGLGSKRPSFSSTPVISPAPNSAPANSNTNSTNS
LITSQDAVERAQQMKKDLLDKLEKLAEDLPPNTLDELIDELGGPENVAEMTGRKGRVVSN
DDGSISYESRSELDVPVEILNITEKQRFMDGDKNIAIISEAASSGISLQADRRAKNQRRR
VHMTLELPWSADRAIQQFGRTHRSNQVTAPEYVFLISELAGEQRFASIVAKRLESLGALT
HGDRRATESRDLSRFNFDNKYGRNALEIVMKSIVNLDSPMVSPPPDYPGEFFKDVRQGLI
GVGLINVEDRSGILTLDKDYNNIGKFLNRILGMEVHQQNALFQYFADTLTAVVQNAKKNG
RYDMGILDLGSGDEKVRKSDVKKFLTPGYSTSGHVELYTISVERGMSWEEATKIWADLTG
PDDGFYLSLQIRNNKKTAILVKEVNPKKKLFLVYRPNTGKQLKLEIYADLRKKYKKVVSD
DALVHWLDQYNSSADTCTHAYWRGNCKKASLGLVCEIGLRCRTYYVLCGSVLSVWTKVEG
VLASVSGTNVKMQIVRLRTEDGQRIVGLIIPANCVSPLVNLLSTSDQSQQLAVQQKQLWQ
QHHPQSIASLSNA
NT seq
4182 nt
NT seq
+upstream
nt +downstream
nt
atggtggagccagggcaagatctactacttgccgctttgagtgagagtgggatcagtccg
aatgacctctttgatatcgatggtggagatgcagggattgccactccaactcctactacg
ccagtgcagcagtcggtgccatttagtccattagagctaggtttggagacagaagcagca
gttcctgttaaacaagagccagaggctgtacctactcccgcactgttaaatgtgaggcag
cagcctccatctactacgacatttgtgctgaatcagataaatcaacttccagccttagga
tctacaattgtaatgactaaaacaccacctgtaacaaccaataggcaaaccatcacttta
acaaagtttatccagactaccgcaaacacacgcccttcaatctcagcaccagtagtccga
aatgccatgacttctgcaccttcaaaagaccaggttcaactgaaggacctactaaaaaat
aatagtcttaatgaacttatgaaattgaaaccacctgccaatattgctcagccagttgca
acagcagctactgatgtaagcaatggtgcagtaaagaaagagtcttctaataaagaagta
gcaagaatatggataaatgacatgaaaatgaggagtttttccccaaccatgaaggttcct
gttgttaaagaagaagatgagccagaggaagaagatgaagaagaaatgggtcatgcagaa
acctatgcagagtacatgccaataaaattaaaaattggactgcgtcacccagatgctgta
gtggaaactagctctttatccagtgtcactcctcctgatgtttggtacaaaacgtctatt
tctgaagaaacgattgataatggctggctatctgcattacagcttgaggcaattacatat
gcagcccagcaacatgaaacattcctgcctaatggagatcgtgctggcttcttaataggt
gatggtgctggtgtagggaaaggcaggacaatagcagggatcatctatgaaaattacttg
ttgagtaggaaaagagccctgtggtttagtgtttccaatgacttaaagtatgatgctgaa
agagatttgagggatattggagcaaaaaacattttagtccattcattaaataagtttaaa
tatggaaaaatttcttccaagcataatgggagtgtgaaaaagggtgttatttttgctacc
tattcttcccttattggtgaaagtcagtctggtggtaaatataaaactagattaaaacaa
cttctacattggtgtggtgatgacttcgatggagttatagtgttcgatgagtgtcataaa
gcaaaaaacttatgtcctgttggttcttcaaaaccaaccaagacagggttggcagttcta
gagcttcagaacaaattgccaaaggccagagttgtctacgctagtgccactggtgcttct
gaacctcgcaacatggcctatatgaaccgtcttggaatatggggtgaaggaactccattt
agagaattcagtgatttcattcaagcagtggagcgcagaggtgttggtgccatggagata
gttgctatggacatgaaactccgaggcatgtacattgctcgacagcttagctttaccgga
gtgaccttcaaaatcgaggaagttcttctttcacagagctatgttaaaatgtataacaaa
gcagtgaagctgtgggtcattgcaagagagcggtttcagcaagctgcagatttgatggat
gctgaacagcggatgaagaagtccatgtggggtcagttctggtctgctcaccaaaggttt
ttcaagtacttgtgcatagcatccaaagttaaaagggttgtgcaacttgcccgagaagaa
atcaagaatggaaaatgtgttgtaattggtctgcagtctacaggagaagctagaacttta
gaagccttggaagagggtggaggagaactaaatgattttgtttcaactgccaaaggggtg
cttcagtcactcattgaaaaacatttccctgctccagacaggaaaaaactgtatagtttg
ctaggaattgatctgtcagctccaagcaacaacagttcaccaagagatagtccttgtaaa
gaaaataaaataaagaagcggaaaggtgaagaaataactcgagaagcaaaaaaagcacga
aaagtgggtggtcttgctggtagcagttctgatgacagtggaagtgagtctgatgcctct
gacaatgaagaaagtgattatgagagctctaaaaacatgagctccggggatgatgatgat
tttaacccgtttagagatgagtctagtgaagacgatgaggatgatccttggttaatcaga
aaagaccacaaaaaaagcaaagataaaaaaaagaagaaaagtatagatccagattctatt
caaagtgccttattagcatcaggtcttggatccaaaagacctagtttttcatccacacca
gtcatctcacctgctcctaacagtgcaccagctaacagtaacaccaacagtaccaatagc
cttataacaagtcaggatgctgtggaaagggcccagcagatgaagaaagacctgcttgat
aaattagaaaagttagcagaagacctccctcctaataccctggatgaacttattgatgaa
ctgggtggccctgagaacgttgctgagatgactggacgaaaggggcgagtagtgagcaac
gacgatggaagcatttcttacgaatcacgatctgaacttgatgtgcctgttgaaatacta
aatattacagaaaaacagaggtttatggatggagataagaatattgctatcatctcagaa
gctgccagctcaggtatttcattgcaagcagatcggagagctaaaaatcaaaggcgaaga
gttcatatgactttggagttaccgtggagtgctgatagagcgatccaacaattcggaaga
actcacagatcaaatcaagttactgcacctgaatatgtctttctgatttctgaattggca
ggagagcaaagatttgcttctattgttgctaaaagacttgagagtttgggtgcgcttaca
catggtgatagaagagctacagaatctagagacctgagcagattcaactttgataataag
tatggaagaaacgctttagaaattgtcatgaaatccattgtcaacttggattctcctatg
gtatcgccacctccagactaccctggagagttcttcaaagatgttcgacaaggactgata
ggagtgggactgatcaatgtagaagatcgctcaggaatccttactcttgataaagattac
aacaacataggaaagttcttaaatagaattctgggcatggaggtgcatcagcagaacgcc
ttgttccagtactttgcggacacactcactgcggttgttcaaaatgccaaaaaaaatgga
agatacgatatgggaatactagatcttggttcaggggatgaaaaggtgaggaaaagtgat
gtgaagaagtttctaactccagggtactcaacctctggtcatgtggaattatacacaatt
agtgtggaaagggggatgtcctgggaggaagcaaccaagatttgggctgatctgacagga
ccagatgacggcttttacttgtcattgcaaataaggaacaacaagaagactgccatctta
gttaaagaagtgaatcctaaaaagaaactcttcttagtttatcggccaaatacagggaag
caactcaaattagaaatctacgctgatctaagaaaaaagtataagaaggtagtgtccgat
gatgccctggtacactggttggatcagtataactcatctgcagatacgtgtacacacgct
tactggcgtggcaattgcaaaaaagcaagcttgggattggtgtgtgaaataggtcttcgt
tgccgcacgtactatgtgttgtgtggctcggtgctgagcgtctggactaaagtagagggt
gttcttgcttctgtcagtggcacaaacgtgaaaatgcagatagttcggctaagaacagaa
gatgggcaacgaattgtaggtttgatcattccggcaaattgtgtgtctcctcttgtaaat
ctcctgtcaacttcagaccagtcccagcagctcgcggtgcagcagaagcagctgtggcag
cagcaccatccgcagagtattgccagcctgagcaacgcctag
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