Dipodomys merriami (Merriam's kangaroo rat): 138828747
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Entry
138828747 CDS
T11079
Symbol
Ddx55
Name
(RefSeq) ATP-dependent RNA helicase DDX55
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
dmer Dipodomys merriami (Merriam's kangaroo rat)
Brite
KEGG Orthology (KO) [BR:
dmer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dmer03009
]
138828747 (Ddx55)
Enzymes [BR:
dmer01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
138828747 (Ddx55)
Ribosome biogenesis [BR:
dmer03009
]
Eukaryotic type
Pre-60S particles
Helicases
138828747 (Ddx55)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
CTT_SPB4
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
138828747
NCBI-ProteinID:
XP_069880961
LinkDB
All DBs
Position
Unknown
AA seq
600 aa
AA seq
DB search
MENVTEGAWESLPVPLHPRVLGALRELGFPHMTPVQSATIPLFMKNKDVAAEAVTGSGKT
LAFVIPALEILLRREEKLKKRQVGAIIITPTRELAIQIDEVLSHFTKHFPQLSQILWIGG
RNPGEDVERFKQHGGNIIVATPGRLEDMFRRKAEGLDLASCVRSLDVLVLDEADRLLDMG
FEASINTILEFLPKQRRTGLFSATQTQEVENLVRAGLRNPVRISVKEKGVAASSTRKTPS
RLENFYMVCKADEKFNQLVHFLRNHKQEKHLVFFSTCACVEYYGKALEVLVSGVRVLCIH
GKMKHKRNKIFLDFRKLHSGILVCTDVMARGIDIPEVHWVLQYDPPSSASAFVHRCGRTA
RIGHGGSALVFLLPMEESYTNFLAINQKCPLQEMSVQKNVANLLPDLKAMALADRAVFEK
GMRAFVSHVQAYAKHECNLIFRLKDLDFASLARGFALLKMPKMPELRGKQFPEFVPVDIN
TDTIPFKDKIREKQRQKLLEQQKKEKAENEGKRKFIKNKAWSKQKAKKERKKKMSAKRKK
EEGSDIEDEDMEELLNDTRLLKKLKKGKITEEEFEKELLISSKRTTKTADLGVSDLEDEC
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atggagaacgtgacggagggcgcctgggagtcgctgccggtgccgctgcaccctcgggtg
ctgggcgcgctgcgggagctgggcttcccgcacatgacgccggtgcagtctgccaccatt
cctctgttcatgaaaaacaaagatgtggcagcagaggcggtcacaggtagtggcaaaaca
ctggcctttgtcatccctgccctggaaattcttctgagaagggaggaaaagttgaagaag
aggcaggtgggagctatcatcatcacccccacccgcgagctggccattcagatcgatgag
gtcttgtcacacttcaccaagcacttcccgcagctcagccagattctctggatcggaggc
aggaatcctggagaagatgtggagaggtttaagcagcatggtgggaacatcattgtggcg
actccaggccgcctggaggacatgttccggaggaaggctgagggcctggacctggccagc
tgcgtgcggtccctggatgtcctggtgctcgatgaggctgacagacttcttgacatgggg
tttgaggcaagcataaacaccatcctggagttcttgccaaagcagaggagaacaggcctt
ttctccgccacacagacgcaggaggtggagaacttggtgcgtgctggcctgcggaaccct
gtccgtatctcggtgaaggagaagggtgtggcggccagcagtacccggaagacgccctcc
cgcctggagaacttctacatggtatgtaaggcagatgaaaaattcaatcagctggtgcat
tttcttcgaaaccataagcaggagaaacatctggtcttcttcagcacctgcgcctgcgtg
gagtactatgggaaggctctggaggtgctggtgagcggtgtgcgggtcctgtgtattcat
ggcaagatgaagcacaagcgtaacaagatcttcctggacttccgcaagctgcacagtggg
attttggtctgcacagatgtgatggcgcggggcatcgacattcccgaagtccactgggtc
ctgcagtatgaccctcccagcagcgccagtgcctttgtgcaccgctgcggccgcacagcg
cgcatcggccacggtggcagtgccctagtgttcctgctgcccatggaagagtcgtacacc
aacttccttgccatcaaccagaagtgccccctgcaggagatgagtgtgcagaagaacgtg
gccaacctgcttccagacctcaaggctatggccctggctgacagagctgtgtttgaaaag
ggcatgagagccttcgtgtcccatgtccaggcctacgccaaacacgagtgcaacctcatc
ttcaggctaaaggatcttgactttgccagccttgcccgaggttttgccttgctcaagatg
cccaaaatgccagaactgaggggaaagcagtttccagagtttgtgcctgtggacattaat
acagacacaattccatttaaagataaaattagagaaaaacaaagacagaaactattggag
caacaaaaaaaggagaaagcagaaaatgaggggaaacgaaaattcataaaaaacaaagca
tggtccaaacagaaagccaaaaaggaaaggaagaaaaagatgagtgcaaaaaggaagaag
gaagagggctctgacattgaagatgaggacatggaggaacttcttaatgacacaaggctc
ttgaaaaagttaaaaaaaggcaaaatcactgaagaagaatttgagaaggagttgctgata
agcagcaaaagaacaacgaagaccgcagatttaggtgtctctgacttggaagatgagtgc
taa
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