Dipodomys merriami (Merriam's kangaroo rat): 138829068
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Entry
138829068 CDS
T11079
Symbol
Acin1
Name
(RefSeq) apoptotic chromatin condensation inducer in the nucleus isoform X1
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
dmer Dipodomys merriami (Merriam's kangaroo rat)
Pathway
dmer03013
Nucleocytoplasmic transport
dmer03015
mRNA surveillance pathway
dmer03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dmer00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
138829068 (Acin1)
09122 Translation
03013 Nucleocytoplasmic transport
138829068 (Acin1)
03015 mRNA surveillance pathway
138829068 (Acin1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dmer03019
]
138829068 (Acin1)
03041 Spliceosome [BR:
dmer03041
]
138829068 (Acin1)
Messenger RNA biogenesis [BR:
dmer03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
138829068 (Acin1)
Spliceosome [BR:
dmer03041
]
Complex C
Other components
EJC/TREX
138829068 (Acin1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RSB_motif
SAP
RRM_1
Motif
Other DBs
NCBI-GeneID:
138829068
NCBI-ProteinID:
XP_069881154
LinkDB
All DBs
Position
Unknown
AA seq
1292 aa
AA seq
DB search
MPEAVGTDPSTSRKMAELEEVTLDGKPLQALRVTDLKAALEQRGLAKSGQKSALVKRLKG
ALMLENLQKHSTPHAAFQPNSQIGEEMSKNSFIKQYLEKQQELLRQRLEREAREAAELEE
ASAESEDEMIQPEGVASLLPPDFQSSLERPELELSRHSPRNSSSFSEEKGESDDEKPRKG
ERRSSRVRQARAAKLSECSQAAEEEEDQETPSRNLRVRADRNLKREDEEEEEEEDDDEEE
EEDDEGQKSREAPVLKQFEEGEKEKPREKREEMMDENPNIRSQEQQEGLERGGRVTRSQE
EARRSHLARQQQEKEVQMAPPLEEDKREMKSSQGLEEKSQSPSPPQLTEDLEKVPVVLQP
EQTASEEETPPPLLTKEASSPPPHVQLQSGEDTEPMEGPAPPVLIQLSPPNTDTESRELL
ISQHTVQLVGGMSPLSKPADTKVESLAEKVSEDSVLPLVQKSIPAEYSAQKFLKTESEKS
AQPLPLTVEELAPAKEITAESLQQQSLEQKESIRVSHTLFPSHRLKQSAESSSSRSSSSS
SSSSRSRSRSPDSSGSHSSPQSKQREVSQTGVQTNPHGRLKTGSRSTSESRSRSRSRSAS
SSSRKSLSPGVSRDNTSYTETKDPSSVQEIAAPPVPQLQIFEPKERPSTSSSSILMRRMS
QPEPAEKHMTQRLQSEQRSPKKCEAEEAEPPAATQPQTSETQTSNVPESERIHQAVEEKE
EVTMDTSENRPENEVPEPPVPIADQVSNDDRPESSAEDEKKESLLPKSFKRKISVVSATK
GVPAGNSDTEGGQPGRKRRWGASTATTQKKPSISITTESLKSLIPDIKPLAGQEAVVDLH
ADDSRISEDETERNGDDGTHDKGLKICRTVTQVVPAEGQENGQREEEEEEKEPEAEPPVP
PQVSVEMALPPPVEHEVKKVTLGDTLTRRSISQQKSGVSITIDDPVRTAQVPSPPRGKIS
NIVHISNLVRPFTLGQLKELLGRTGTLVEEAFWIDKIKSHCFVTYSTVEEAVATRTALHG
VKWPQSNPKFLCADYAEQDELDYHRGLLVDRPSETKAEEQGMPRPLHPPPPPPVQPPPHP
RAEQREQERAVREQWAEREREMERRERTRSEREWDRDKVREGPRSRSRSRDRRRKERAKS
KEKKSEKKEKTQEEPPAKLLDDLFRKTKAAPCIYWLPLTDSQIVQKEAERAERAKEREKR
RKEQEEEEQKEREKEAERERNRQLEREKRREHSRERDRERERDRERDRGDRDRDRERDRE
RGRERERDRRETKRHSRSRSRSTPVRDRGGRR
NT seq
3879 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaagccgtcgggacggacccgagtacctcacgcaagatggcggagctggaggag
gtgactctggacgggaagcctcttcaggcgctgcgggtgaccgacctgaaggccgccctg
gagcagcgaggcctagccaagagcgggcagaagagtgccctggtcaagcggctcaaaggg
gctctaatgctagaaaatttacagaaacattcgacaccccatgctgcattccagccaaat
tcccagattggggaagaaatgagtaagaacagtttcataaagcagtatctggaaaagcag
caagagctacttaggcagcgtctagaacgtgaagctcgagaagctgcagaacttgaagaa
gcttcagctgagtcggaggacgagatgatccagcctgagggagtggcttccctgctgcct
cctgactttcagagcagcctggagagaccagagctggagctcagcagacattcgcccaga
aacagctcctctttttctgaagagaaaggtgaatctgatgatgagaaaccaaggaaagga
gaaagacgatcttccagggtcagacaggcaagggcagctaaactctctgagtgtagccag
gctgctgaagaagaagaggatcaagaaacaccttctagaaatctgagagtcagggcagat
agaaatttgaaaagagaggatgaagaagaggaggaggaggaagatgatgatgaagaggag
gaggaagatgatgagggacaaaaatctagggaggcaccagttctgaaacagtttgaagaa
ggagagaaagagaagcccagagaaaaacgagaggaaatgatggatgagaatcctaacata
agatcccaagaacagcaggagggtttggagagaggagggcgagttacaagatctcaggaa
gaagctagaagaagtcatctggccagacagcagcaagagaaagaagtgcaaatggctcct
ccccttgaggaggataaaagagaaatgaaatcttcacagggcttggaagagaaatcccaa
tctccttcccctcctcaactgactgaggatctagagaaggtccctgttgtgctacagcca
gagcaaacagccagtgaagaggagactccaccacctttacttaccaaggaagcatcttct
ccaccacctcatgtacaactccagagtggggaagacactgagcccatggaaggcccagca
cccccagttctcattcagttatctcctcctaatacagacactgagagcagagagttattg
atatctcagcatactgtccagttggtaggaggcatgtctcctttgtcaaaacctgcagac
accaaagtagaatctctagcagagaaagtgtcagaagatagtgtcttgcctctagttcag
aaaagcataccggctgaatactcagcccagaagtttcttaaaactgagtcagaaaaatct
gctcagccactccctctaacagtggaggaattagcaccggccaaagagatcactgcagag
tctctgcagcagcagtctttggaacagaaggagagcataagggtttctcatactcttttc
ccaagccacagattgaagcagtcagccgaatcatcgtctagccggtcttcctcctcttca
tcctccagttctagatccagatcgcgctctcctgacagttcaggctctcactcatctcca
caatccaagcagagagaagtatcccagacaggagttcagaccaaccctcatggtagactt
aagacaggctcaaggtcaacatcagagtccaggtcccgttcccgatcccgttcagcatca
agcagcagcagaaaatctctgagccctggagtctccagggacaacaccagctatactgaa
accaaagatccctcttctgttcaagagattgcagctccaccagtgccacagctgcagatt
tttgaaccaaaggagaggccctccacctcctcatcctctatcttaatgaggcgtatgagc
cagcctgaaccagctgaaaaacatatgacccagagattacagtctgagcagaggagccca
aagaagtgtgaagctgaagaggcagagccaccagctgccacccagcctcaaacctcagag
actcagacctctaatgtaccagaatcagaaaggattcatcaggctgttgaggagaaggag
gaagtgaccatggacacaagtgaaaatagacctgaaaatgaggttccagagcctcctgtg
cctattgcagaccaagtcagcaatgatgaccgcccagagagcagtgctgaagatgagaag
aaagagagtttgctgcccaaatcattcaagaggaagatctccgttgtctcagctaccaag
ggagtaccagctggaaacagtgacacagaggggggccagcctggtcgaaagcgacgttgg
ggagccagcacagccactacccagaagaaaccctccatcagtatcaccactgaatcactc
aagagcctcatccccgacatcaaacccctggcggggcaggaggctgttgtggatcttcat
gctgatgactctcgcatctctgaggatgaaacggagcgtaatggcgacgatgggacccat
gacaagggactgaaaatatgccggacggtcactcaggtagtacctgcagagggccaggag
aatggacaaagggaagaagaggaagaagagaaggagcctgaagcagaacctcctgtacct
ccccaggtgtcggtagagatggctttgcccccacctgtagaacatgaagtgaaaaaagtc
actttaggagataccttaactcggcggtccattagccagcagaagtctggagtttccatt
acaatcgatgacccagtccgaactgcccaggtgccctccccgcccaggggcaagatcagt
aatattgtccatatctccaatttggttcgtcccttcactttaggccaactgaaggagttg
ttaggacgtacaggaaccttggtggaagaggccttctggattgacaagatcaaatctcat
tgctttgtaacgtattcaactgtagaggaagccgttgccacccgcacagctctacatggg
gtcaaatggccccagtccaatcccaaattcctttgtgctgactatgctgagcaagatgag
ctggattatcaccggggcctcttggtggaccgtccctctgaaacaaaggctgaggaacag
ggtatgccacgacccctgcacccaccaccaccacccccagtccagccaccaccccatccg
cgggcagagcagcgggagcaagagcgagctgtgcgagaacagtgggcagagcgggaacgg
gaaatggagcggcgagagcgaactcgatcagagcgtgaatgggatcgggacaaagttcga
gaagggcctcggtccagatcacggtcccgtgaccgccgccgcaaggaacgtgcaaaatct
aaagaaaagaagagtgagaaaaaagagaaaacccaggaagagccacctgctaagttactg
gatgaccttttccgtaagactaaggcagctccttgcatctattggctcccattgactgac
agccagattgttcagaaggaagcggagcgcgctgaacgtgccaaggagcgggagaagcgg
cggaaggaacaagaggaggaagagcaaaaggagcgggagaaggaagctgagcgggaacgg
aaccgacaactagaacgggagaaacggcgcgagcacagccgggaaagggacagggagcga
gaaagagacagggagcgcgaccggggagaccgagatcgggatagggaaagagaccgggaa
cgaggcagggagagagagagggatcgcagagaaaccaagcgccacagcagaagccggagt
cgaagcacacctgttcgagaccgcggcgggcgccgctag
DBGET
integrated database retrieval system
