Dipodomys merriami (Merriam's kangaroo rat): 138829135
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Entry
138829135 CDS
T11079
Symbol
Trim54
Name
(RefSeq) tripartite motif-containing protein 54 isoform X1
KO
K10653
tripartite motif-containing protein 54
Organism
dmer Dipodomys merriami (Merriam's kangaroo rat)
Pathway
dmer04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
dmer00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
138829135 (Trim54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dmer04121
]
138829135 (Trim54)
Ubiquitin system [BR:
dmer04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
138829135 (Trim54)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4
RING_XB3-XBAT31
zf-B_box
zf-RING_5
zf-RING_2
zf-C3HC4_4
zf-C3HC4_3
zf-RING_6
PHP
TRIM_CC
DUF349
Sina_RING
CoiA_N
DD_DDX21-DDX50
DUF5799
UvrD_C
FlgN
COG2_C
SpoIISA_toxin
GH123_cat
DUF1421
PAH_ZNF598
Zn_ribbon_FGT1_2
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
138829135
NCBI-ProteinID:
XP_069881343
LinkDB
All DBs
Position
Unknown
AA seq
364 aa
AA seq
DB search
MNFAVGFKPLLGDAHSMDNLEKQLICPICLEMFSKPVVILPCQHNLCRKCANDVFQASNP
LWQSRGSTAVSSGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESSRPLHSKA
EQHLMCEEHEDEKINIYCLSCEVPTCSLCKVFGAHKDCEVAPLPTIYKRQKSELSDGIAM
LVAGNDRVQAVITQMEEVCQTIEDNSRRQKQLLNQRFETLCAVLEERKGELLQALAREQE
EKLQRVRSLIRQYGDHLEASSKLVESAIQSMEEPQMALYLQQAKELINKVGAMSKVELAG
RPEPGYESMEQFSVSVEHVAEMLRTIDFRPGAAGEDEDEEVAFDGDDGNAGPEEERPGAS
ESLH
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgaacttcgccgtgggtttcaagccgctgctcggggatgcgcacagcatggacaacctg
gagaagcagctcatctgccccatctgcctggagatgttctccaagcccgtggtgatcctg
ccctgccagcacaacctgtgccgcaagtgcgcaaacgacgtcttccaggcctccaaccct
ctgtggcaatcccggggctccactgctgtgtcatcaggaggccgtttccgctgcccatct
tgcaggcatgaggttgtcctggatcgacatggagtctatggcctgcagcgaaacctgcta
gtggagaacattattgatatttacaagcaggaatcctccaggccactgcactccaaagca
gagcagcatctcatgtgtgaggaacatgaggatgaaaagatcaacatctactgcctgagc
tgtgaagtgcccacctgctctctctgcaaggtctttggggcccacaaggactgtgaagtg
gcaccactgcccaccatttacaaacgccagaagagcgagctcagcgatggcatcgcgatg
ctggtggcgggcaatgaccgcgtgcaagcagtgatcacgcagatggaggaggtgtgccag
accatcgaggacaacagccgcaggcagaagcagttgttaaaccagaggttcgagaccctg
tgcgccgtgctggaggagcgcaagggcgagctgctgcaggcgctggcccgggagcaggag
gagaagctgcagcgtgtccgcagcctcatccgccagtatggagaccacctggaggcctcc
tccaagctggtggagtcggccatccagtccatggaggagccccaaatggcgctctacctc
cagcaggccaaggaactgatcaataaggtcggggccatgtcgaaggtggagctggcgggg
cggcccgagccgggctacgagagcatggagcagttctcggtgagcgtggagcacgtggcc
gaaatgctgcggaccattgacttccggcccggagcagccggggaggacgaggatgaggag
gtggcgttcgacggggacgacggtaacgcgggccccgaggaagagcggccgggcgcatca
gaaagcctgcactga
DBGET
integrated database retrieval system
