Dipodomys merriami (Merriam's kangaroo rat): 138829176
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Entry
138829176 CDS
T11079
Symbol
Spast
Name
(RefSeq) spastin isoform X1
KO
K13254
spastin [EC:
5.6.1.1
]
Organism
dmer Dipodomys merriami (Merriam's kangaroo rat)
Brite
KEGG Orthology (KO) [BR:
dmer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dmer04131
]
138829176 (Spast)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
dmer04812
]
138829176 (Spast)
Enzymes [BR:
dmer01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
138829176 (Spast)
Membrane trafficking [BR:
dmer04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
138829176 (Spast)
Cytoskeleton proteins [BR:
dmer04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
138829176 (Spast)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Vps4_C
RuvB_N
AAA_5
AAA_22
TIP49
AAA_16
Mg_chelatase
AAA_14
IstB_IS21
DUF815
MIT
MAPEG
AAA_24
nSTAND3
NPHP3_N
AAA_2
DUF4368
Motif
Other DBs
NCBI-GeneID:
138829176
NCBI-ProteinID:
XP_069881421
LinkDB
All DBs
Position
Unknown
AA seq
616 aa
AA seq
DB search
MSSPGGRGKKKGCGGPSSQVPPRPPPPCQAPAPPAAGRSPAPGSPHKRNLYYFSYPLVVG
FALLRLVAFHLGLLFVWLCQRFSRALMAAKGSSGAAPPPASPSAPMPAPGGEAERVRAFH
KQAFEYISVALRIDEDEKAGQKDQAVEWYKKGIEELEKGIAVIVTGQGEQCERARRLQAK
MMTNLVMAKDRLQLLEKLQPVLQFSKSQTDVYNDSTNLTCRNGHLQSESGAVPKRKDPLT
HTSNSLPRSKTAMKSGSTGLSGHQRAPSCSGLSTVSGVRQGPGPAAATHKGIPKTNKTNK
PSTPTTAARKKKDLKNFRNVDSNLANLIMNDIVDNGTAVKFDDIAGQELAKQALQEIVIL
PSLRPELFTGLRAPARGLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSKYMGEGE
KLVRALFAVARELQPSIIFIDEVDSLLCERREGEHDASRRLKTEFLIEFDGVQSAGDDRV
LVMGATNRPQELDEAVLRRFIKRVYVSLPNEETRLLLLKNLLCKQGSPLTQKELAQLARM
TDGYSGSDLTALAKDAALGPIRELKPEQVKNMSASEMRNIRLSDFTESLKKIKRSVSPQT
LEAYIRWNKDFGDTTV
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgagttctccgggcggacgagggaagaagaaaggctgcggcggccccagcagccaggtg
cctcccaggcctccgcccccctgccaggcccccgcccctccggccgccgggcggtccccg
gcgcccggctccccgcataagcggaacctgtattacttctcctacccgctggtcgtcggc
ttcgccctgctgcgcctggtggccttccacctggggctcctcttcgtgtggctctgccag
cgcttctctcgcgccctcatggccgccaaggggagctccggggccgcgccgccgcccgcc
tcgccctcagccccgatgccggcgcccggcggggaggccgagcgcgtgcgggccttccac
aaacaggcctttgagtacatctccgtggccctgcgaatcgatgaggacgagaaagcagga
cagaaagatcaagctgtggaatggtataagaaaggtattgaagaactagaaaaaggaata
gctgtcatagttacaggacaaggtgaacagtgtgaaagagccagacgccttcaagctaaa
atgatgactaatttggttatggctaaggatcgtttacaacttctagagaagctgcaacca
gttttgcaattttccaagtcacaaacggatgtctataatgacagtactaacttgacatgc
cgaaatggacatctccagtcagaaagtggagctgttccaaaaagaaaagatcccttaaca
cacactagtaattcactgcctcgatcaaaaacagccatgaaaagtggatctacaggtctt
tcgggtcatcagagagcacctagttgtagtggtttatccactgtttctggagtaagacag
ggacctggtcctgcagctgccactcataagggtattccaaaaacaaataaaacaaataag
ccctccactcctacaactgctgctcgaaaaaagaaagacttgaaaaactttaggaatgtg
gacagcaaccttgctaaccttataatgaacgatattgtagacaatggaacagctgttaaa
tttgatgacatagctggtcaagaattggcaaaacaggcattacaagaaattgttattctt
ccttctctaagacctgagttatttacagggcttagagctcctgcaagaggattattactg
tttggtccacctggaaatgggaagacaatgctggccaaagcagtagctgcagaatcgaat
gcaaccttttttaatataagtgctgcaagcttaacttcaaaatatatgggagaaggagag
aaattggtgagagctctttttgcggtggctcgagaacttcaaccttctataatttttata
gatgaagttgatagtcttttgtgtgaaagaagagaaggagagcatgatgctagtagacgt
ctgaaaacagaatttctaatagaatttgatggtgtacaatctgctggcgatgacagagta
cttgtaatgggtgcaactaataggccacaagagcttgatgaggctgttctcaggcgtttc
atcaaacgagtatatgtgtctttaccaaatgaggagacaagactccttttacttaaaaat
ctgttatgtaaacagggaagtccattgacccaaaaagaactagcacaacttgctagaatg
acagatggatactcaggaagtgatctaacagctttggcaaaagatgcagctctgggtcct
attcgagaactgaaacctgaacaggtgaagaacatgtctgcaagtgagatgagaaatatt
cgattgtctgatttcactgaatccttgaaaaagataaaacgcagtgtgagtcctcaaacc
ttggaggcatacatacgttggaacaaggactttggagataccaccgtttaa
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