Dipodomys merriami (Merriam's kangaroo rat): 138829263
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Entry
138829263 CDS
T11079
Symbol
Msh2
Name
(RefSeq) DNA mismatch repair protein Msh2
KO
K08735
DNA mismatch repair protein MSH2
Organism
dmer Dipodomys merriami (Merriam's kangaroo rat)
Pathway
dmer01524
Platinum drug resistance
dmer03430
Mismatch repair
dmer05200
Pathways in cancer
dmer05210
Colorectal cancer
Brite
KEGG Orthology (KO) [BR:
dmer00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
138829263 (Msh2)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
138829263 (Msh2)
09162 Cancer: specific types
05210 Colorectal cancer
138829263 (Msh2)
09176 Drug resistance: antineoplastic
01524 Platinum drug resistance
138829263 (Msh2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dmer03400
]
138829263 (Msh2)
DNA repair and recombination proteins [BR:
dmer03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
138829263 (Msh2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_I
MutS_II
AAA_27
Motif
Other DBs
NCBI-GeneID:
138829263
NCBI-ProteinID:
XP_069881643
LinkDB
All DBs
Position
Unknown
AA seq
934 aa
AA seq
DB search
MAVQPKDTLQLEGAAEAGFVRFFEGMPEKPTTTVRLFDRGDFYTAHGEDALLAAREVFKT
QGVIKYLGPAGAKTLQSVVLSKMNFESFVKDLLLVRQYRVEVFKNRAGNKASKENDWYMA
FKASPGNLSQFEDILFGTNDMSTSVGVMGVKMSTVDGQRQVGVGYVDSLQRKLGLCEFPD
NDQLSNLESLLIQIGPKECILPGGETAGDMGKLRQVIQRAGILITERKRADFSTKDICQD
LNRLLKSKKGEQMNSSVLPEMENQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYM
KLDIAAVRALNLFQGSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERL
DLVEAFVEDAELRQSLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQA
LEKHEGRHQVLLLAVFVTPFIELRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPNLTE
LRDVMNDLEKKMQSTLIHAARDLGLDPGKQIKLDSNAQFGYYFRVTCKEEKVLRNNKNFT
TVDIQKNGVKFTNSKLSSLNEEYTKSKTEYEEAQNAIVKEIVNISSGYIEPMQTLNDVLA
QLDAVVSFAHVSNGAPVPYVRPDILEKGEGRIVLKASRHACVEVQDEVAFIPNDVRFDKE
KQTFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAKISIVDCILARVGAGDSQLK
GVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMF
ATHFHELTALASQIPTVNNLHVTALTTEENLTMLYQVKKGVCDQSFGIHVAELANFPKHV
IECAKQKALELEEFQNIGASQGRGEMEPAAKKCYLEREQGEKIIQEFLSKVKQVPFTEMS
EENITIKLKQLKAELIAKNNSFVNELISRIKLTT
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcagccgaaggacacgctgcagctggagggtgcggccgaggccggcttcgtg
cgcttcttcgagggcatgcccgagaagccgaccaccacggtgcgcctcttcgaccggggc
gacttctacacggcgcacggcgaggacgcgctgctggcagcccgcgaggtgttcaagacc
cagggggtgatcaagtacctggggccggcaggagcaaagactctgcagagtgttgtgctt
agtaaaatgaattttgagtcttttgtaaaagatcttcttctggttcgtcagtatagagtt
gaagttttcaagaatagagctggaaataaagcatccaaggagaatgattggtatatggca
tttaaggcttctcctggcaatctgtcccagtttgaagatattctctttggtaccaatgac
atgtcaacttccgttggtgttatgggtgtcaaaatgtcgacagttgatggtcaaagacag
gttggagttgggtatgttgattccctgcagaggaagctaggactatgtgagtttcctgat
aatgatcagctctccaatctcgagtctcttctgattcagattggaccaaaagaatgcatt
ttaccaggaggagagactgctggagacatggggaaactgagacaggttattcagagagca
ggaattctgatcacagaaagaaaaagagctgatttttccacaaaagacatttgtcaggac
ctgaaccggttattgaaaagcaaaaagggagaacagatgaatagttctgtcttgccagaa
atggagaatcaggttgcagtttcatcattgtctgcagtaatcaagtttttagagctttta
tctgatgattcaaattttggacagtttgaactgactacttttgacttcagccagtatatg
aaattggatattgcagcagttagagcccttaaccttttccagggttctgttgaggataca
actggctctcagtctctggctgcattgctgaataaatgcaaaaccccgcaagggcaaaga
ctagttaaccagtggattaagcagcctctcatggataagaacagaatagaagagagatta
gatttagtggaagcttttgtagaagatgcagagttaaggcagagtttacaagaagatttg
cttcgtcgattcccagatcttaacagacttgccaagaaatttcaaagacaagcagcaaac
ttacaagattgttaccgactttatcaggggataaatcaactccctaatgttatacaggct
ctggaaaaacatgaaggaagacaccaggtgttgttgttggcagtttttgtgactccattt
attgagcttcgttctgatttctccaaatttcaggaaatgatagaaacaactttagatatg
gaccaggttgagaaccatgaatttcttgtaaaaccttcatttgatcctaatctgactgaa
ttaagagacgtaatgaatgacttagaaaagaagatgcagtccacattaatacatgcagcc
agagatctgggattggaccctggcaaacagattaaattggattccaatgcacagtttgga
tattattttcgtgtaacctgcaaggaagaaaaagtccttcgtaacaataaaaactttact
acagtagatatccagaagaatggtgttaaatttaccaacagtaaactgtcttctttaaat
gaagaatatactaaaagtaaaacagagtatgaagaggcacagaatgccattgtaaaagaa
attgtcaatatttcttcaggttatatagaaccaatgcagacactcaatgatgtgctagct
cagttagacgctgttgtcagctttgctcatgtttcaaatggagcacctgttccgtatgtt
cgaccagatattttggagaaaggagaaggaagaattgtattgaaagcatccagacatgct
tgtgttgaagttcaagatgaagttgcatttattcctaatgatgtacgctttgataaggaa
aaacagacgttccacatcattactggacccaatatgggaggtaaatcaacatatatccgc
caaactggggtaatagtactcatggcccaaattgggtgtttcgtgccgtgtgaatcagca
aaaatatccattgtagattgcatcttggctcgagtcggggctggtgacagtcagttgaaa
ggagtctccacatttatggctgaaatgctagaaacggcttctatcctcaggtctgcaacc
aaagattctttaataatcatagatgaattgggaagaggaacctctacttatgatgggttt
ggcttggcctgggctatatcagagtacattgcaacaaagattggtgctttttgcatgttt
gcaacccattttcatgaacttactgcactggccagtcagataccaactgtgaataatcta
catgtgacagcattaaccactgaagagaatttaacaatgctttatcaggtcaagaaaggt
gtctgtgaccaaagttttggaattcatgttgcagagcttgctaattttcccaagcatgta
atagaatgtgccaaacaaaaagccctggaactcgaggagtttcagaatattggagcttca
caaggacgtggtgaaatggaaccagcagcaaagaagtgctatctggaaagagagcaaggt
gaaaaaattatccaggagtttctatccaaggtgaaacaagtaccctttactgaaatgtca
gaagaaaacatcacaataaagctaaaacagctgaaagctgagttgatagccaagaataat
agctttgtaaatgaactcatttcacgaataaagcttactacgtga
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