Dipodomys merriami (Merriam's kangaroo rat): 138829288
Help
Entry
138829288 CDS
T11079
Symbol
Sptbn1
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
dmer Dipodomys merriami (Merriam's kangaroo rat)
Pathway
dmer04517
IgSF CAM signaling
dmer04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
dmer00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
138829288 (Sptbn1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
138829288 (Sptbn1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
dmer04812
]
138829288 (Sptbn1)
Cytoskeleton proteins [BR:
dmer04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
138829288 (Sptbn1)
Intermediate filaments
Intermediate filament-binding proteins
138829288 (Sptbn1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
SCAR_helical
SOS1_NGEF_PH
PH_11
Motif
Other DBs
NCBI-GeneID:
138829288
NCBI-ProteinID:
XP_069881728
LinkDB
All DBs
Position
Unknown
AA seq
2364 aa
AA seq
DB search
MTTTVATDYDNIEIQQQYSDVNNRWDVDDWDNENSSARLFERSRIKALADEREAVQKKTF
TKWVNSHLARVSCRITDLYTDLRDGRMLIKLLEVLSGERLPKPTKGRMRIHCLENVDKAL
QFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDNKEKKSAKDALL
LWCQMKTAGYPNVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHYNLQNAFNL
AEQHLGLTKLLDPEDISVDHPDEKSIITYVVTYYHYFSKMKALAVEGKRIGKVLDNAIET
EKMIEKYESLASDLLEWIEQTIIILNNRKFANSLVGVQQQLQAFNTYRTVEKPPKFTEKG
NLEVLLFTIQSKMRANNQKVYMPREGKLISDINKAWERLEKAEHERELALRNELIRQEKL
EQLARRFDRKAAMRETWLSENQRLVSQDNFGFDLPAVEAATKKHEAIETDIAAYEERVQA
VVAVARELEAENYHDIKRITARKDNVIRLWEYLLELLRARRQRLEMNLGLQKIFQEMLYI
MDWMDEMKVLLLSQDYGKHLLGVEDLLQKHALVEADIGIQAERVRGVNASAQKFATDGEG
YKPCDPQVIRDRVAHMEFCYQELCQLAAERRARLEESRRLWKFFWEMAEEEGWIREKEKI
LSSDDYGKDLTSVMRLLSKHRAFEDEMSGRSSHFEQAIKEGEDMIAEEHFGSEKIRERII
YIREQWANLEQLSAIRKKRLEEASLLHQFQADADDIDAWMLDILKIVSSNDVGHDEYSTQ
SLVKKHKDVAEEITNYRPTIDTLHEQASALPQAHAESPDVRGRLAGIEERYKEVAELTRL
RKQALQDTLALYKMFSEADACELWIDEKEQWLNNMQIPEKLEDLEVIQHRFESLEPEMNN
QASRVAVVNQIARQLMHSGHPSEKEIKAQQDKLNTRWSQFRELVDRKKDALLSALSIQNY
HLECNETKSWIREKTKVIESTQDLGNDLAGVMALQRKLTGMERDLVAIEAKLSDLQKEAE
KLESEHPDQAQAILSRLAEISDVWEEMKTTLKNREASLGEASKLQQFLRDLDDFQSWLSR
TQTAIASEDMPNTLTEAEKLLTQHENIKNEIDNYEEDYQKMRDMGEMVTQGQTDAQYMFL
RQRLQALDTGWNELHKMWENRQNLLSQSHAYQQFLRDTKQAEAFLNNQEYVLAHTEMPTT
LEGAEAAIKKQEDFMTTMDANEEKINAVVETGRRLVSDGNINSDRIQEKVDSIDDRHRKN
RESASELLMRLKDNRDLQKFLQDCQELSLWINEKMLTAQDMSYDEARNLHSKWLKHQAFM
AELASNKEWLDKIEKEGMQLISEKPETEAVVKEKLTGLHKMWEVLESTTQTKAQRLFDAN
KAELFTQSCADLDKWLHGLESQIQSDDYGKDLTSVNILLKKQQMLENQMEVRKKEIEELQ
SQAQALSQEGKSTDEVDSKRLTVQTKFMELLEPLNERKHNLLASKEIHQFNRDVEDEILW
VGERMPLATSTDHGHNLQTVQLLIKKNQTLQKEIQGHQPRIDDIFERSQNIVTDSSSLNA
EAIRQRLADLKQLWGLLIEETEKRHRRLEEAHKAQQYYFDAAEAEAWMSEQELYMMSEEK
AKDEQSAVSMLKKHQILEQAVEDYAETVHQLSKTSRALVADSHPESERISMRQSKVDKLY
AGLKDLAEERRGKLDERHRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERF
REFARDTGNIGQERVDTVNHMADDLINSGHSDAATIAEWKDGLNEAWADLLELIDTRTQI
LAASYELHKFYHDAKEIFGRIQDKHKKLPEELGRDQNTVETLQRMHTTFEHDIQALGTQV
RQLQEDAARLQAAYAGDKADDIQKRENEVLEAWKSLLDACEGRRVRLVDTGDKFRFFSMV
RDLMLWMEDVIRQIEAQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTTCIELGKSLLAR
KHYASEEIKEKLLQLTEKRKEMIDKWEDRWEWLRLILEVHQFSRDASVAEAWLLGQEPYL
SSREIGQSVDEVEKLIKRHEAFEKSAATWDERFSALERLTTLELLEVRRQQEEEERKRRP
PSPEPSTKASEEAESQQQWDTSKGEQVSQNGLPAEQGSPRMTDTVDTSEMVNGAAEQRTS
SKESSPIPSPTSDRKAKTALPAQSAATLPARTQETPAAQMEGFLNRKHEWEAHNKKASSR
SWHNVYCVINNQEMGFYKDAKTAASGIPYHSEVPVSLKEAVCEVALDYKKKKHVFKLRLN
DGNEYLFQAKDDEEMNTWIQAISSAISSDKHDLSASTQSTPASSRAQTLPTSVVTITSES
SPGKREKDKEKDKEKRFSLFGKKK
NT seq
7095 nt
NT seq
+upstream
nt +downstream
nt
atgacaactacagtagccacagattacgacaacattgagatccaacagcagtacagcgat
gtgaacaaccgctgggatgtggatgactgggacaatgagaatagctctgcacggctcttc
gaacggtcccgcatcaaggctctggcagatgagcgtgaagccgtgcagaagaagaccttc
acgaaatgggtcaactctcaccttgcccgagtgtcctgtcggatcacagatctgtacact
gaccttcgagatggacggatgctcatcaagctgctggaagtactctccggagagaggctg
cctaaacccaccaagggaagaatgcgcatccactgtctggagaatgtggacaaggccctt
cagttcctgaaggaacagagagtccatcttgagaacatgggttcccacgacattgtggat
gggaaccaccggctgacccttggcctcatttggaccatcatcttacgcttccagatccaa
gatatcagtgtagaaactgaagataataaagagaagaagtctgccaaggatgcattgctg
ttgtggtgccagatgaagacagctggataccccaatgtcaacattcacaattttaccact
agctggagagatggtatggcgtttaatgcactaatacacaagcaccggcctgacctgata
gattttgataaactgaagaaatccaatgcacactacaatcttcagaatgcatttaacctg
gcagaacagcacctcggcctcactaaactgttggatcctgaagatatcagtgtggaccac
cctgatgagaagtctattatcacttacgtggtgacttactaccactacttctctaagatg
aaggccttggctgttgagggaaaacgaattggaaaggtgcttgacaacgccattgaaaca
gaaaaaatgattgaaaagtatgaatcacttgcctctgaccttttggaatggattgaacaa
accatcattattctgaacaatcgcaaatttgccaattctctggtcggggttcaacagcag
cttcaggcattcaacacttaccgcactgtggagaaaccacccaaatttactgaaaaggga
aacttggaagtgctactcttcactattcagagcaagatgagggccaacaatcagaaggtc
tacatgccgagagagggcaagctcatctctgatatcaacaaggcctgggaaagactggaa
aaagcggaacatgagcgagaactggccctgcgtaatgagcttataagacaagagaaactg
gaacagctcgcccgcagattcgatcgcaaggcagctatgagggagacttggctaagcgaa
aaccagcgcctggtatcccaggacaactttggatttgaccttcccgcagttgaagccgcc
acaaaaaagcacgaggccattgagacagacattgccgcatacgaggaacgtgtgcaggct
gtggtggccgtggccagggagcttgaggcagagaactaccatgacatcaagcgcatcacc
gcgaggaaggacaatgtcatccggctctgggagtacctgctggaactgctcagagctagg
agacagcgtctcgagatgaacttaggcttgcaaaaaatattccaggaaatgctctacatt
atggactggatggatgaaatgaaggtgctattattatctcaagactatggcaaacacttg
cttggtgtggaggacctgttacagaagcatgctctcgttgaagcagacattggaatccag
gcagagcgtgttaggggtgtcaatgcctctgcccagaaatttgcaacagatggggaaggc
tacaagccctgtgaccctcaagtgatccgagaccgtgtggctcacatggagttctgctat
caagagctttgccagctagcagctgagcgccgggcccgcctggaagagtcccgccgtctc
tggaagttcttctgggagatggcagaagaggaaggctggatccgagagaaggagaagatc
ctgtcctctgatgattatgggaaagacctgaccagtgtcatgcgcctgctcagcaagcac
cgggcatttgaggacgagatgagcggccgcagcagccacttcgagcaggctatcaaagaa
ggtgaagatatgattgcggaggagcactttggatcagaaaagatccgtgagaggatcatt
tacatccgggagcaatgggccaacctggaacagctctcagctattcggaagaagcggctg
gaggaggcctcacttctacatcagttccaggcagatgccgatgacattgatgcctggatg
ctggacatcctcaagatagtctccagcaacgatgtgggccacgacgagtactccacacag
tctctggtgaaaaaacacaaggatgtggctgaagagatcaccaattacaggcccacaatc
gacacgctgcatgagcaagccagcgccctcccccaggctcacgcagagtctccagatgtg
aggggacggctggcgggcattgaagagcgctacaaggaagtggcagagctcacgcggctg
aggaaacaggcgctgcaggacaccctggccctgtacaagatgttcagcgaggctgatgcc
tgtgagctctggattgatgagaaggagcagtggctcaataatatgcagatcccagagaaa
ctggaggacctagaagtcatccagcacaggtttgagagcctcgaaccagaaatgaacaac
caggcttcccgggttgctgtagtaaaccagattgcacgtcagctgatgcacagtggccat
cccagtgagaaggaaatcaaagcccaacaggacaaactcaatacaaggtggagtcagttc
agagaactggttgacaggaagaaggatgctcttctgtctgccctgagcatccaaaactat
catcttgagtgcaatgaaaccaaatcttggattcgagaaaagaccaaagttattgaatct
acccaggacctaggcaacgacctggctggagtcatggccctacagcggaagctgactggc
atggagcgagacttggttgccattgaagcaaagctgagtgacctgcagaaggaggcagag
aagctggagtctgagcaccccgaccaggctcaggcaatcctgtctcggctggccgagatc
agtgacgtgtgggaggagatgaagaccaccctgaagaaccgagaggcctccctgggagaa
gccagcaagctgcagcagttcctacgggacttggatgacttccagtcgtggctctccagg
acccagacagccatcgcctctgaggacatgcccaacaccctgactgaggcagagaagctt
ctcacacagcatgaaaatatcaaaaatgagatcgacaactatgaggaggactaccagaag
atgagggacatgggtgagatggtcacccagggacagactgatgcccagtacatgtttctg
cgccagcggctacaggccttggacactggatggaatgaactccacaaaatgtgggagaac
aggcaaaatctcctctcccagtcccacgcctaccagcagttcctgagggacacaaagcaa
gccgaagcctttcttaacaaccaggagtatgttttggctcatactgaaatgcccactacc
ctggaaggagctgaagcagctattaaaaaacaagaggacttcatgaccaccatggatgcc
aacgaggagaagatcaacgctgttgtggagacaggacggaggttggtgagcgatggaaac
atcaattctgatcgcatccaagaaaaagtggactccattgatgacagacacaggaagaat
cgtgagtcagccagtgaacttctaatgagattgaaggacaacagggatcttcagaaattc
ctgcaagattgtcaagagctttctctctggatcaatgaaaagatgcttacagcccaggac
atgtcttacgatgaagccagaaatctgcacagtaaatggttgaagcaccaagcatttatg
gcagaacttgcatctaacaaagaatggcttgacaaaattgagaaggaaggaatgcagctc
atttcagaaaagcctgagacggaagctgtggtgaaggagaaactcactggtttacataaa
atgtgggaagtccttgaatccaccacccagaccaaggcccagcggctctttgatgcaaac
aaggctgaactttttacccagagctgcgcagatctggataaatggctccatggcctggag
agtcagattcagtctgacgattatggcaaagaccttaccagcgtcaacatcctgctgaaa
aagcaacagatgctggagaaccagatggaagtacggaagaaggaaattgaggagcttcag
agccaggcccaagctctgagtcaggaagggaagagcaccgatgaggtagacagcaagcgc
ctcactgtgcagaccaaattcatggagctgctcgaacccttgaatgaaaggaagcataat
ctgctggcctccaaagagatccatcagttcaacagagatgtggaagacgagatcttgtgg
gttggtgagaggatgcctttggcaacttccacagatcacggccacaacctccagactgtt
cagctgctaataaagaaaaaccagacgctccagaaagaaatccaggggcatcagcctcgc
attgatgacatctttgagagaagccaaaatatcgtcactgacagcagcagcctcaatgcg
gaggccatcagacagaggctcgccgacctgaagcagctgtggggtctcctcattgaggag
acggagaaacgccaccgacgccttgaggaggcgcacaaggcccagcaatactactttgac
gccgctgaagccgaagcatggatgagcgagcaggagctgtacatgatgtctgaggagaag
gccaaggatgagcagagtgctgtctccatgttgaagaaacaccaaattttagaacaagct
gtggaggactatgcagagacagtacaccagctctccaagacaagccgggcattggtggct
gacagccatcctgaaagtgagcgcattagcatgcggcagtccaaagtagataagctatat
gctggcctgaaggaccttgctgaagagaggagaggcaagctagatgagaggcacaggcta
ttccagctcaaccgggaggtggatgacctagagcagtggattgctgagagggaggtggtc
gcagggtcccatgagctggggcaggactacgagcacgtcaccatgttgcaagaacgattc
cgggaatttgctcgagacacagggaacattggacaagaacgtgtggacacggtcaatcac
atggcagatgatctcatcaactctggacactcggatgctgccaccatcgctgaatggaag
gatggccttaatgaagcctgggctgatctgctggagctcattgacacgagaacacagatt
ctggctgcctcctatgaactgcataagttttatcatgatgccaaggaaatctttgggcgt
atccaggataaacacaagaaactccctgaggagcttgggagagatcagaacaccgtggag
accttacagagaatgcacaccacctttgagcatgacatccaagctctgggcactcaggtg
aggcagctgcaggaggatgcagctcgcctccaggcagcctatgcgggtgacaaggctgac
gacatccagaagcgtgagaacgaggtcctggaagcctggaagtccctcctggacgcctgt
gagggccgcagggtgcggctggtggacacaggggacaagttccgcttcttcagcatggtg
cgggacctcatgctttggatggaggatgtcatccggcagatagaagcccaggagaagcca
agggatgtgtcatctgttgaactattaatgaataatcatcaaggtatcaaagctgaaatt
gatgctcgcaacgacagtttcacaacctgtattgaacttgggaaatccctgctggctagg
aagcactatgcatctgaggagatcaaagaaaagttactacagttgacggaaaagagaaaa
gaaatgattgacaagtgggaagacagatgggaatggttaagactgattttggaggtccat
cagttctcaagggacgccagtgtggccgaggcttggctgcttggacaggagccctaccta
tccagccgcgaaattggccagagtgtggatgaggtggagaagctcatcaagcgccatgag
gcatttgaaaagtctgcagcgacctgggacgagaggttctccgccctggaaaggctaaca
acattggagttactggaagtgcgcagacagcaagaggaagaagagaggaagaggcggcca
ccttctccagagccaagcacaaaggcttcagaggaggccgagtcccagcagcaatgggat
acttcaaaaggagagcaagtttcccagaatggtttgccggctgagcagggatcgccacgg
atgacagatacggtggacaccagcgaaatggtcaatggcgctgctgaacagaggacgagc
tccaaagagtccagtcctatcccctccccgacctctgaccgcaaggccaagactgcactc
ccagcccagagtgccgccaccctgcccgccaggacgcaggagacccccgcggcccagatg
gaaggcttcctaaaccggaagcacgagtgggaggcccacaacaaaaaagcctcaagcagg
tcctggcacaatgtatattgtgtcataaataaccaagaaatgggtttctacaaagacgcc
aagaccgctgcttccggcatcccttaccacagcgaggtccctgtgagtttgaaggaagcc
gtctgtgaagtggcccttgactacaagaagaagaaacacgtgttcaagctcagactaaat
gatggcaatgagtacctcttccaagccaaagatgatgaggaaatgaacacgtggatccag
gccatctcctccgctatctcctctgacaaacatgacctgtctgccagcacccagagcaca
ccagcctcgagccgggcgcagaccttacccaccagcgtggtcaccatcaccagcgagtcc
agtcccggcaaacgggagaaggacaaagagaaagacaaagagaagcgcttcagccttttt
ggcaaaaagaagtga
DBGET
integrated database retrieval system
