Dipodomys merriami (Merriam's kangaroo rat): 138829625
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Entry
138829625 CDS
T11079
Name
(RefSeq) tonsoku-like protein isoform X1
KO
K09257
NF-kappa-B inhibitor-like protein 2
Organism
dmer Dipodomys merriami (Merriam's kangaroo rat)
Brite
KEGG Orthology (KO) [BR:
dmer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dmer03000
]
138829625
03400 DNA repair and recombination proteins [BR:
dmer03400
]
138829625
Transcription factors [BR:
dmer03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Ankyrin only
138829625
DNA repair and recombination proteins [BR:
dmer03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
138829625
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank
Ank_4
Ank_2
Ank_5
Ank_3
TPR_12
LRR_6
TPR_8
LRR_4
TPR_7
TPR_1
RPN7
LRR_At5g56370
TPR_21
Motif
Other DBs
NCBI-GeneID:
138829625
NCBI-ProteinID:
XP_069882157
LinkDB
All DBs
Position
Unknown
AA seq
1370 aa
AA seq
DB search
MSLERDLRQLSKAKARAQKSGQLREEAACCQQLGELLAGHGRFAEALEEHQQELQLLECA
LDPLGCAVAHRKIGERLAEMENYSAALQHQHRYLELAGSLSNYTELQRAWATIGRTHLDI
YDHCQSKDSLLQAQAAFEKSLAIVDEKLEGTLGQRELSEMRTRLYLNLGLTFERLQQMAL
CNDYFKKSIFLAEQNHLYEDLFRARYNLGAIHWCAGQHSQAMRCLEGARECARAMKMRFM
ESECCVTISQILQDLGDFLAAKRALKKAYRLGSQKPAQRAAVCQSLRYVLAVIQLQQRLE
EAEGSDPQDALAICEQLGDLFSKAGNFPKAAEAYQKQLHVAERLNRPDLELAIIHVSLAT
TLGDMKDHRQAVYHYEEELRLRKGNALEEAKTWFNIAVSREEAGDAYELLAPCFQKAVSC
AEQAQQPWLQRQVLQHLHAVQLRLQPQEASGTETKLQELSVAEGEEEEEEEEAEAGEALD
TSELELSESEDDTTRLSRPLEDEELRGCLGRRQVNKWNQRNDLGETLLHRACIEGHLRRV
QDLVRRGHPLNPRDYCGWTPLHEACNYGHLEIVRFLLDHGAAVNDPGGQGCDGITPLHDA
LNCGHFEVAELLIQRGASVTLRTKKGHSPLETLQHWVKLYQRDLDLETRQKAAAMQRTLQ
AASGPAPDGSSDLPAVPNDHLFDPEISPPSSPCLDSPLCIPRPAEAPLVPSRVSPEQVTP
AVARPRKGRHRPASSSSSSSSEDEDCVGTLRPSQKKHRGSGLTLGGVRKPGPTNSKEAAA
VHAVWASYKAAIRGEGSAQSRCLSSCPPRDSGEAPSSPAALIPEEEYLSEDWLELDTPLT
RSRLPRLPQPQGSWDNRRASASGSAEEERPVRPQARSKQSHLACVPNKAGTGSLATEPQR
IPSAPRVLGPSGENLAAGQSSVLIQPPSIRVRVRIQDHLFLIPVPHSSDVHSVAWLADQA
AQRYYQTCGLLPRLTLRKEGALLASQDPIPDVLQSDDEVLAEVTSWDLPPLTDRYRRACQ
SLGQGEHQWVLQAMECQGSSPSFSACSLALRQAQLTPLLRALKLHTVLRELHLAGNRLGD
GCVPELLAALGTMPSLAILDLSSNHLGQEGLHQLAGGALGQAALKNLEELDLSMNPLGDS
CGQALASLLRACPLLSTLRLQACGFSSSFFLNHQAALSSAFQDAEHLKTLSLSYNALGPP
ALARVLQSLRVRTLLHLELGSVAASKSNLGLMDSVVSYLTKEGCALTHLTLSANYLGDKA
VRELSRCLPLCPTLISLDLSANREISSVGLGELLSALQERPQGLSFLGLSGCSVGGPLGA
GLWDAAVARLRELQLCSRAVCSEDRAALRLRLPPGAAALGRGPLLFFRGL
NT seq
4113 nt
NT seq
+upstream
nt +downstream
nt
atgagcctggagcgcgatcttcgccagctgagcaaagccaaagccagggcccagaagagc
gggcagctgcgcgaggaggccgcctgctgccagcaactgggggagctgctggccggccat
ggccgcttcgcggaagccctggaagagcaccagcaggagctgcagcttctggagtgtgcc
ctggaccccttgggctgcgccgtcgcccatcgcaagatcggagagcggctggcagagatg
gagaactactctgctgccctgcagcaccagcaccgttacctggagctagctggttccctg
tccaactacactgagctgcagagggcctgggctaccattggccgcacccacttggacatc
tatgaccactgccagtccaaggattccttgctgcaagcacaagctgcctttgaaaaaagc
ttggctattgtggatgagaagctagaaggaacattgggccagagagagctgagtgagatg
aggacccggctgtatctcaacctgggactcacctttgagcgtctacaacagatggccctg
tgcaatgactacttcaagaaaagcatctttcttgctgaacagaatcatctctatgaggat
ctattccgggcccggtacaacttaggggccatccactggtgtgcagggcagcattctcag
gccatgcgctgcctggagggggcccgggaatgtgcacgtgccatgaagatgcggtttatg
gagagcgagtgctgtgtgaccatctcccagatcctccaagacctgggggacttcctggct
gccaaacgagccctgaagaaggcctacagactaggttcccagaagcctgcacagagagca
gctgtctgccagagtctcagatatgtgctggcagtgatccagctgcagcagaggctggag
gaggcggagggcagtgaccctcaggatgccttggccatctgtgagcagctgggggacttg
ttctccaaggcaggcaactttcccaaggcagctgaggcttaccagaagcagctccatgtt
gctgagcggctgaacagaccagacctggagctggccatcatccacgtgtccctggccacc
acacttggagacatgaaggaccaccgccaggctgtgtaccactatgaagaagagctgagg
ctgcgcaagggcaatgccctggaggaagccaagacctggttcaacattgcagtgtctcgt
gaggaagccggtgatgcgtatgaactgttggcaccatgcttccagaaggctgtgagctgt
gcagagcaggcccagcagccctggttacagcggcaggtcttgcaacaccttcatgccgtg
cagctgaggttacagcctcaagaggcttctgggactgaaaccaaactgcaggaacttagt
gtggctgagggggaggaagaggaggaggaggaggaggccgaggctggtgaggccctggat
accagtgagctggaactctcggagagtgaggacgacaccacccgtctctcccggccactg
gaagatgaggagcttcggggctgcctgggccggcggcaggtgaacaagtggaaccagcgc
aatgacctgggagagaccctgctgcaccgagcctgtatcgaaggccatctgcgccgcgtc
caggaccttgtgaggagggggcaccccctgaatcctcgggactactgcggatggacacct
ttgcacgaagcctgcaactacgggcatctggagatcgtccgcttccttctggaccatggg
gctgcagtgaatgatccgggtggccaggggtgtgacgggatcaccccattgcacgatgct
ctgaactgtggccactttgaggtagctgagctgctcattcagcgaggggcatccgttacc
ctacgaaccaagaagggccacagcccactggagacattgcagcactgggtgaagctgtac
cagagggacttagaccttgagacgcgacagaaggcagcagccatgcagaggacgctgcag
gcggcctctggcccagccccagacggctcctctgacctcccagctgttccaaatgaccat
ctgtttgaccctgagatctctcctccttctagcccttgcctagactcccctttgtgtatc
cctagaccagcagaggcccccctggtcccttctagggtctccccagaacaggtcactcca
gctgtggccaggcctcgaaaaggcaggcacaggccagccagcagcagcagcagcagcagc
tctgaggatgaggactgcgtgggcaccctcaggccatctcagaagaagcacagaggctcg
ggcctgacgctgggtggggtccggaagcctggccctaccaacagcaaggaggccgctgca
gtccatgctgtctgggcttcctacaaggcagccatccgaggtgagggcagcgcgcagagc
cgatgcctgagctcctgccctcctcgggattcaggggaagccccctcctccccagcagca
ctgattcctgaggaagagtacctgtcagaggactggctagagctggacacacccctcacc
cgcagccggctgccccgccttccccagccccagggaagctgggataatcgcagagccagt
gcctcagggtcagctgaggaggagcggcctgtcaggccccaagcccggagcaagcagagc
cacctggcctgtgtgccgaacaaagctggaactggcagcttggctacagagccccagaga
atccccagtgcgcccagggtcttggggcccagtggagaaaacctcgccgcagggcagtct
tcagttctgatccagccaccttccatccgagtgcgagttagaattcaggatcacctcttc
ctcatccctgtcccacacagcagtgatgtccactccgttgcctggctggctgaccaggct
gcccaacgctactaccagacttgtgggctattgccaaggctcaccctgaggaaggaggga
gccttgctggcctcacaagaccccattcctgatgtactgcagagtgatgatgaggtattg
gccgaagtgacctcgtgggacctccccccgctgactgaccgttaccgcagagcctgccag
agcctcgggcaaggagagcaccagtgggtgctgcaagccatggagtgccagggctcaagc
ccttcatttagcgcttgctccctggccctgcgccaggcccagctcacacccctgctgcga
gccctcaagctgcacactgtgctccgggagctgcacctggcagggaaccggctgggtgac
ggatgtgttcctgagcttctggctgccctgggcaccatgcccagcctggccatccttgac
ctttcctctaatcacctgggccaggaaggtctacaccagcttgctgggggggccctgggc
caggctgccttgaagaacttggaagagctggacttaagcatgaacccactgggggatagc
tgtggccaggctctggcctctctcctgcgggcctgccccttgctcagcaccctgcgttta
caggcctgtggcttcagctccagcttcttcctgaaccaccaggcagccttgagtagtgcc
ttccaagatgctgagcacctgaagactctgtccctgtcatacaatgctctgggtccccct
gccttggccagagtcttacagagcctgcgtgtccgcactctcctgcacctagagcttggc
tccgttgcggccagcaagagcaacttgggcctcatggactctgttgtcagctacctgacg
aaggaaggctgtgctctgacccacctgaccctgtctgcaaactacttaggtgacaaggct
gtgagagagctgagcaggtgtctccctctctgccccacactcatctccctggacctctct
gccaatcgtgaaatcagcagtgtgggcctaggtgagcttctgtctgcccttcaagagcgg
ccccaaggcctcagcttccttggcctgtcaggctgctccgtcgggggcccgctgggcgcg
gggctctgggacgccgccgtcgcgcgcctgcgcgagctgcagctgtgcagcagggccgtg
tgcagcgaggaccgcgccgccctgcgcctgcgcctgccgcccggcgccgccgcgctgggc
cgcggcccgctgctcttcttccggggcctctga
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