Dipodomys merriami (Merriam's kangaroo rat): 138829642
Help
Entry
138829642 CDS
T11079
Name
(RefSeq) protein scribble homolog isoform X1
KO
K16175
protein scribble
Organism
dmer Dipodomys merriami (Merriam's kangaroo rat)
Pathway
dmer04390
Hippo signaling pathway
dmer04530
Tight junction
dmer05165
Human papillomavirus infection
dmer05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
dmer00001
]
09130 Environmental Information Processing
09132 Signal transduction
04390 Hippo signaling pathway
138829642
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
138829642
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
138829642
09172 Infectious disease: viral
05165 Human papillomavirus infection
138829642
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
LRR_8
LRR_14
LRR_4
PDZ_2
LRR_1
LRR_9
LRR_LRWD1
Pept_S41_N_bact
AbLIM_anchor
Motif
Other DBs
NCBI-GeneID:
138829642
NCBI-ProteinID:
XP_069882183
LinkDB
All DBs
Position
Unknown
AA seq
1661 aa
AA seq
DB search
MLKCIPLWRCNRHVESVDKRHCSLQAVPEEIYRYSRSLEELLLDANQLRELPKPFFRLLN
LRKLGLSDNEIQRLPPEVANFMQLVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRL
PDGFTQLRSLAHLALNDVSLQALPGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQLD
LGGNDLEVLPDTLGALPNLRELWLDRNQLSSLPPELGNLRRLVCLDVSENRLEELPVELG
GLALLTDLLLSQNLLQRLPDGIGQLKQLSILKVDQNRLCEVTEAIGDCENLSELILTENL
LTALPHSLGRLTKLTNLNVDRNHLEALPPEIGGCVALSVLSLRDNRLAVLPPELAHTAEL
HVLDVAGNRLRSLPFALTHLNLKALWLAENQAQPMLRFQTEDDVQTGEKVLTCYLLPQQP
LPSLEEAGPQRSPAEGCGEAPPARVSVIQFLDPDGDEDAEEAAVKRGLQRRATPHPSELK
VMKRGMEERRSEAYTCRPDAGPPSPSQEEKRLSAESALSGGSGPATSTASEGEPEGPLEP
APELDQQEAMSPGQEEDTEEGYEEPTVHFAEDTLLPREDGESEEGHPEAAWPLPGGRQRL
IRKDTPHYKKHFKISRLPQPEAVVALLQGTQPVGEGPLGPGGWHNGPRAPWAPQAQEEEE
EEEEDRAEEEGEATTEEEDKEEAAASAPSVKGVSFDQANNLLIEPARIEEEELTLTIVRQ
TGGLGISIAGGKGSTPYKGDDEGVFISRVSEEGPAARAGVRVGDKLLEVNGVALHEAEHH
EAVEALRGAGAAVQMRVWRERMVEPENAVTITPLRPEDDSSPRERRGGGLRLALLQPDTP
APLRQRHTACLVRSEKGLGFSIAGGKGSTPYRAGDGGIFISRIAEGGAAHRAGTLQVGDR
VLSINGVDMTDARHDHAVSLLTAASPTIALLLEREAEGPLPPSPPAPASPALPTATSAAV
SAVAPAEPRLSPGLLAATLEGPYPVEEVRVPRAGGPLGLSIVGGSDHSSHPFGTQEPGVF
ISKVLPRGLAARCGLRVGDRILAVNGQDIREATHQEAVSALLRPCLELCLLVRRDPPPPG
MRELCIQKAPGEKLGISIRGGAKGHAGNPCDPTDEGIFISKVSLAGAAGRDGRLRVGLRL
LEVNQQSLLGLTHAEAVQLLRSVGDSLTVLVCDGFDTSAAAGLEVSPGVIANPFAAGIGH
RNSLESISSVDRELSPEGSGKEELPAPTPPWGPVPTEAAAPSLEPLKLDYRSLAAVPGAG
STHRAPPGTPGGKAAGAPCSPGSPQTKPGVIQPLAQAWPRGSLAPRDRGGPCSPPSPDEL
PARVKQAYRAFAAVPAAHPPEDLSGQPPTPGPAASPEQLSFRERQKYFELDVRAPQAEGH
PKRVSLVGADDLRKMQEEEARKLQQKRAQMLQEEAAAQRIAGPSPGRAALDEELPEDEPP
WADPGPPRGPSPASPQPPSGGAPVRTAKAERRHQERLRMQSPELRAPERALSPAERRALE
AEKRALWRAARMKSLEQDALRAQMVLSKSQEGRAKRGPLERLAESPSPAPTPSPPPLEDL
GIQTSTSPGRLPLSGKKFDYRAFAALPSSRPVYDIQSPDFVEELRPLEPSPSPGPQEEDG
EVALALLGRPSPGAVSPEDVTLCSSRRAVRPGRRGLGPVPS
NT seq
4986 nt
NT seq
+upstream
nt +downstream
nt
atgctcaagtgcatcccgctctggcgctgcaaccggcacgtggagtcggtggacaagcgg
cactgctccctgcaggcggtgcccgaggagatctaccgctacagccgcagcctggaggag
ctgctgctcgacgccaaccagctgcgcgagctgcccaagccttttttccggctgctgaac
cttcgcaagctgggcctcagtgacaatgagatccagcggttgccgcctgaagtcgccaac
ttcatgcagctggtggagttggatgtgtcccgaaatgatattcctgagataccagaaagc
atcaagttctgcaaggctctagagatcgccgacttcagcggaaaccccttgtccaggctc
cccgacggcttcacgcagctgcgcagcctggctcacctggccctgaatgacgtgtccctg
caggccttgcccggggacgtgggcaacttggctaacttggtgaccctggagctccgggag
aacctgctcaagtctctgcctgcgtccctgtcgttcctggttaagctggaacagctggat
ctgggaggcaatgacctggaggtgctgcctgacacgctgggggctctgcccaacctgcgg
gagctgtggctggaccgtaaccagctgtcctcgctgcctccggagctcgggaacctgcgg
cgtctggtgtgcctggatgtttcggagaaccgtctggaggagcttcctgtggagctgggt
ggactggccttgctcacagacttgctgctttcccagaacctgctccagcggctgccagat
ggcatcggtcagctaaagcagctgtctatcctgaaggtggaccagaaccggctgtgtgag
gtgacagaggccatcggagactgtgaaaacctctctgagctgatcctcacggagaacttg
ctaacggcgctgccccactctctgggcaggttgaccaagctcaccaacctcaacgtggac
cggaaccacctcgaagccctgcctcctgagattgggggctgtgtggcgctcagcgtcctc
tccttaagggacaaccgcctggccgtgctgccgcccgagctcgcccacacggccgagctg
cacgtgcttgacgtggctggaaaccggctccggagcctgccgttcgcgctcacccacctc
aacctcaaggccctgtggctggccgagaaccaggcgcagcccatgctccgattccagacc
gaggacgatgttcagaccggggagaaagtgctcacctgctacctgctgccgcagcagccc
ctgcccagtctggaggaagcggggccgcagcgcagccccgcggagggctgtggcgaggcc
ccgcctgcgcgggtcagcgtcatccagttccttgaccccgacggggacgaggatgcggag
gaggctgcggtgaagcggggcttgcagcgccgggccacgcctcaccccagtgagctcaaa
gtgatgaagaggggcatggaggagcgccggagcgaggcctacacctgcaggcccgacgcg
gggcctccctcgccttcccaggaggagaagcggctgagcgcagagtccgccttgagcgga
ggctctggcccggccaccagcacggcctcggagggggagcccgagggccccctggagccc
gcgccggagctggaccagcaggaagccatgtcgccagggcaggaggaggacacggaggag
ggctacgaggagcccacagtacacttcgcggaggacacgctgctgcccagggaggacggc
gaaagcgaggagggacaccccgaggccgcctggcccctgccgggcgggcggcagcgtctc
atccggaaggacacgccccactacaagaagcacttcaagatctccaggcttccgcagccc
gaggccgtggtggccctgctgcaggggacacagccagtcggggagggcccccttgggcct
gggggctggcacaacggcccccgggcgccctgggcacctcaggcccaagaggaggaggag
gaggaggaggaggacagggctgaggaggagggagaggccaccacggaggaggaggacaaa
gaagaggccgcggcttctgccccctctgtcaagggggtgtcgtttgaccaggccaataac
ctgctgatagagcccgcccgcattgaggaggaagagctgacactcaccatcgtccggcag
actgggggcctgggcatcagcatcgcggggggcaagggctcaaccccctacaagggggac
gacgagggtgttttcatctctcgggtgtctgaagaaggccccgcagcccgcgctggagtt
cgtgtaggggacaaactccttgaggtgaacggtgtggccctgcacgaggccgagcaccac
gaggcggtggaggcgctgcggggggccggcgcggccgtgcagatgcgggtgtggcgggaa
cggatggtggagccagagaacgcagtcaccatcacgccgctgcgccccgaggacgactcc
agccctcgggagcggcggggagggggtctgcgcctggccctgctccagcccgacaccccg
gcgcccctccgccagcgccacaccgcctgcctcgtgcgcagcgagaagggcctgggcttc
agcatcgccggtgggaaaggctccacgccgtaccgggcaggcgacgggggcatcttcatc
tcccgcatcgccgaggggggcgcggcccacagggctggcacgctacaggtcggcgaccgc
gtcctgtcgatcaacggagtggacatgaccgacgccaggcacgaccacgccgtctccctg
ctgaccgccgcctcccccaccatcgctctgctgctggagagggaggctgagggccccctc
cctccgagtccccccgcgccggcctccccggccctccccactgccacctccgccgccgtg
agcgccgtcgcccccgcggagcccaggctgtcccccggcctcctggcggccaccttagaa
ggaccgtaccccgtggaggaggtccgtgtgcccagggcggggggcccgctggggctcagc
atcgtcggtggctctgaccactccagccacccgttcggtacccaggagcccggtgtgttc
atctccaaggtgcttcctcggggcctcgcggctcgctgcggccttcgagttggggaccgg
atccttgcggtgaacgggcaggacatccgcgaggccacgcaccaggaggctgtcagtgct
ctgctccggccctgcctggagctgtgcctgctggttcggagggaccccccaccccccggc
atgcgggagctctgtatccagaaggctcccggggagaagctgggcatcagcatccggggg
ggcgccaagggccacgcaggcaacccctgcgaccccacagacgagggcatctttatctcc
aaggtgagcctcgcgggggcggccgggcgcgacgggcgtctgcgcgtggggctgcgtctg
ctggaggtgaaccagcagagcctgctgggcctcacccacgcagaggccgtgcagctgctg
cgcagcgtgggcgactcgctcaccgtgctcgtgtgcgacggcttcgacaccagcgccgct
gcgggcctggaggtgtccccgggggtcattgccaaccccttcgccgcgggcatcgggcac
aggaacagcctggagagcatctcctccgttgaccgggagctgagccccgagggctcgggc
aaggaggagctgcccgccccaacgcctccctgggggcctgtgcctacggaggccgcggcc
ccgagtctggagcccctaaagctggactaccggtccctggctgcggtgcctggcgccggc
agcacgcacagggcgccgccaggaacacctggaggaaaggcggcgggggctccctgctct
ccaggcagcccgcagaccaagccaggggtgatccagccattggctcaggcctggcccagg
ggctccctggcccccagggacagaggtggcccctgctctccgccctccccggacgagctg
cccgcccgcgtgaagcaggcctacagggccttcgccgccgtgcccgctgcacaccccccc
gaggacctcagcggtcagccccccacgcccgggccggcggcctcccccgagcagctgtct
ttccgagagcggcagaagtactttgagctggatgtgcgggcaccccaggccgagggccac
cccaagcgcgtgtccctggtgggtgcggatgacctgaggaagatgcaggaagaggaagcc
cgcaagctgcagcagaagcgggcgcagatgctgcaggaagaggccgccgcgcagcgcatc
gcgggccccagcccgggccgggcggcactggatgaggagctgccggaggacgagccgccc
tgggcagaccctggccccccgagagggcccagcccggcatctccccaacctccgagcggc
ggtgccccagtgcggacagccaaagcagagcggcgccatcaggagcggctgcgcatgcag
agcccagagctgcgggcacccgagcgggccctgtcacccgcagagcgccgagccctggag
gctgagaagcgggcgctgtggagggccgccaggatgaagtctctggagcaggatgctctc
cgagcacagatggttcttagcaagtcccaggagggcagggccaagcgagggcccctggag
cggctggccgagtccccatcgccagctcccaccccgtcccctcctcccctggaagacctt
ggcatccagaccagcacctcccccggacgcctgcctctgtctggaaagaagtttgactac
agggcgtttgcagccctgccttcttccagacctgtctatgacatccagtctccagacttc
gtggaggagctgcggcctctcgagccatctcccagccccggcccacaggaggaggacggg
gaggtagccctggctctcctgggcaggccttcgcccggtgctgtaagccccgaagatgtg
acactgtgcagcagccgccgggccgtgcggccggggcgccgcggcctgggccccgtgccc
tcctag
DBGET
integrated database retrieval system
