Dipodomys merriami (Merriam's kangaroo rat): 138829727
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Entry
138829727 CDS
T11079
Symbol
Atxn1l
Name
(RefSeq) ataxin-1-like
KO
K23616
ataxin 1/1L
Organism
dmer Dipodomys merriami (Merriam's kangaroo rat)
Pathway
dmer04330
Notch signaling pathway
dmer05017
Spinocerebellar ataxia
dmer05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
dmer00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
138829727 (Atxn1l)
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
138829727 (Atxn1l)
05022 Pathways of neurodegeneration - multiple diseases
138829727 (Atxn1l)
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Ortholog
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GFIT
Motif
Pfam:
AXH
ATXN-1_C
Motif
Other DBs
NCBI-GeneID:
138829727
NCBI-ProteinID:
XP_069882309
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All DBs
Position
Unknown
AA seq
689 aa
AA seq
DB search
MKPVHERSQECLPPKKRDLPVTSEDMGRTTSCSTNHTPSSDASEWSRGVVVAGQSQAGGR
VSLGGDGAEAITGLTVDQYGMLYKVAMPPATFSPTGLPSVVNMSPMPPTFNVASSLIQHP
GLHYPPIHYAQLPSTSLQFIGSPYSLPYAVPPNFLPGPLLSPSANLTTSHLPHFVPYASL
LAEEATPPPQASSPARSFSKAPSATSPSGQLPHHSSTQPLDLAPGRMPIYYQMSRLPAGY
TLHEAPSVGANPILTPQESQSALEAAAANGGQRQRERNSVRRESEALDSPSSKGESQGLV
SVVECVVDGQLFSGSQTPRVEVAAPAHRGTPDTDLEVQRVVGALASQDYRVVAAQRKDEP
SPLNLSHHTPDHQGEGRGSARNPVELAEKNQARGFYPQPYQEPVKHRPLPKAMVVANGNL
VPPGTDPSLLPVSSEILVASSLDMQARATFPDKEPTPPPITSSHLPSHFMKGAIIQLATG
ELKRVEDLQTQDFVRSAEVSGGLKIDSSTVVDIQESQWPGFVMLHFVVGEQQSKVSIEVP
PEHPFFVYGQGWSSCSPGRTAQLFSLPCHRLQVGDVCISISLQSLNSNSVSQASCVPPGQ
LGLPRERPERTVLGPRDLCDSEGKSQSAGEGSHVVESSQSEPGAQACWPAPTFQRYSMQG
EEARAALLRPSFIPQEVKLSIEGRSNAGK
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgaaacctgttcatgagaggagtcaggaatgccttccaccaaagaaacgagacctcccc
gtgaccagcgaggatatggggagaactaccagctgctccacaaaccacacaccctccagt
gatgcctctgaatggtcccgaggggttgtggtcgccgggcagagccaggccggaggcaga
gtcagcctggggggtgatggagctgaggccatcactggtctgacagtagaccagtatggt
atgctatataaggtggctatgccacctgccaccttctcacccactggcctcccctccgta
gtgaacatgagtcccatgccccccacgtttaatgtagcgtcttcactgattcaacatcca
ggactccactatcccccaatccactacgctcagctcccgtccacctcactgcagttcatt
gggtctccttacagccttccctatgctgtgccacccaatttcctaccaggtcccctcctc
tctccttctgccaacctcaccacctctcaccttccacactttgtgccatacgcctcactc
ctggcagaagaagccactcctcctccccaggcttcatccccagcccgttcatttagcaaa
gctccttcggccacctccccatccggccagttgcctcatcactcgagtactcagccactg
gacctcgctccaggccggatgcccatttattatcagatgtctaggctacccgctgggtat
acattgcatgaagccccttcagtaggtgccaacccaattcttacccctcaggagagccag
tctgctctagaagcggctgctgccaatggaggacagagacaacgagagcgaaattcagta
agacgggaaagtgaagcccttgactcccccagcagcaagggtgaaagccaaggactggtg
tcggtggtagaatgtgtggtggatggacagttgttttcaggttctcagactccacgggtg
gaggtggcagcaccagcacaccgagggactccagacaccgacctcgaggtccagcgggtg
gttggcgctttagcttctcaggactatcgcgtggtggcagctcagaggaaggatgaaccc
agccctctcaacctatcccatcatacccctgaccatcagggtgagggacgaggatcagcc
aggaaccctgtagaactggcagagaagaatcaggcccgtgggttctaccctcagccctat
caggaaccggtgaaacacagacctttacccaaagcaatggttgtagccaatggcaacctg
gtgccccctggaactgacccaagcctactgcctgtgagctcagagatcctagtggcatca
agtctagacatgcaggccagagccaccttcccagacaaggagccaacaccaccccccatt
acctcctcccacttgccctcccatttcatgaaaggcgccatcatccagctggctacaggg
gagctgaagcgagtggaggacctccagacccaggattttgtgcgcagtgccgaagtgagc
ggggggctgaagattgactctagcacagttgtggacattcaagagagccagtggcctgga
tttgtcatgctgcattttgttgttggtgagcagcagagcaaagtgagcatcgaggtgccc
cctgagcacccattctttgtatatggccagggttggtcctcctgcagccctgggcggact
gcacagctcttctctctgccctgccatcggctacaggtgggagatgtctgcatctctata
agtttacagagcttgaacagtaactcagtttctcaggccagctgcgttcccccaggccag
ctgggtctccctcgagaaaggcctgagaggacagtcctggggcccagagacttatgtgac
agtgaggggaagagccagtccgcaggagaaggctcccatgtggtagagtcctcccagtct
gagcctggtgctcaggcctgctggccagcccccaccttccaaagatacagcatgcaaggg
gaggaggcacgggctgcgctgctccgtccctctttcattccacaggaggtaaagctgtct
attgaagggcgttccaatgcgggaaaatga
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