KEGG   Dipodomys merriami (Merriam's kangaroo rat): 138830122
Entry
138830122         CDS       T11079                                 
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog isoform X1
  KO
K15075  DNA repair/transcription protein MET18/MMS19
Organism
dmer  Dipodomys merriami (Merriam's kangaroo rat)
Brite
KEGG Orthology (KO) [BR:dmer00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:dmer03036]
    138830122
   03400 DNA repair and recombination proteins [BR:dmer03400]
    138830122
Chromosome and associated proteins [BR:dmer03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    138830122
DNA repair and recombination proteins [BR:dmer03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     138830122
SSDB
Motif
Pfam: MMS19_C MMS19_N HEAT_2 HEAT TOR1L1_N HEAT_EZ
Other DBs
NCBI-GeneID: 138830122
NCBI-ProteinID: XP_069882630
LinkDB
Position
Unknown
AA seq 1030 aa
MAAAAALEAAAPTGALWGLVQDFVMGQQEGPAGQVAADVKSGSYTVLQVVEALGSSLDNP
EPRTRARGIQLLSQVLLQCHPLLLEKEVVHLILFYENRLKDHHLVIPSVLQGLRALSLYV
SLPSGLAVSVLKAIFQEVHVQSLPQVDRHTVYNIITNFMQTREEELKGLGADFTFGFIQV
MDGEKDPRNLLVAFRIVHDLISRDYSLGPFVEELFEVTSCYFPIDFTPPPNDPHGIQRED
LILSLRAVLASTPRFAEFLLPLLIEKVDSEILSAKLDSLQTLNACCAVYGQKELKDFLPS
LWASIRREVFQTASERVEAEGLAALHSLTACLSRSVLRADAEDLLDSFLSNILQDCRHHL
CEPDMKLVWPSAKLLQAAAGASTRACDHITSNVLPLLLEQFHKHSQSNQRRTILEMILGF
LKVQPKWSYEDKDERPLSSFKDQLCSLVFMALTDPSSQLQLVGIRTLTVLGSQPDLLSSV
DLELAVGHLYRLSFLEQDSQSCRVAALEASGTLATLFPGAFSSHLVPKLAEELHKEESNL
VREDWHTKCSRHLLCLQALSAVSTHPSIVKETLPLLLQHLWQLNKGNVVAGASEVIAICQ
SLDQVAEKCQQDPDCCWYFHDTAVPCLLALAVQASIPEQEPSVIRKVLLEDGVLTAMASV
IGTATTHLSPELAAQSVTRIVPLFLDGNTSFLPENSFSSRFQPFQDGSLGQRRLVALLMA
FVCSLPRNVEIPQLNRLMRELLSLSCCYSCPFSATAAAKCFAGLLNKHPAGQQLDEFLQL
AMDTVEASLNPGPSRSQAFTLLLWVTKALVLRYHPLSSCLTNRLMGLLSDPELGPTAADG
FSLLMSDCTDVLTRAGHAEVRIMFRQRFFTDNVPALVQGFHAAPQDVKPNYLKGLSHVLN
RLPKPVLLPELPTLLSLLLEALSCPDSVVQLSTLSCLQPLLLEAPQVMSLHIDTLVTKFL
NLSSSPSMAVRIAALQCMHALTRLPTPVLLPYKPQVIRALARPLDDKKRLVRKEAVSARG
EWFLLGSPGS
NT seq 3093 nt   +upstreamnt  +downstreamnt
atggctgccgccgccgctctggaggcggcagcacctactggagccctgtggggcctcgta
caagacttcgtcatgggtcagcaggagggtcccgctggccaggtggctgcagatgtcaaa
tccggcagctatacagtgttacaagtggtggaagccctcgggtcctctcttgataatcca
gaacccagaactcgggcacgaggaattcaacttttgtcacaggtgctactccagtgtcac
cccttgctcctggaaaaggaagtggtacacctgatcctgttctatgagaaccggctaaag
gaccatcatcttgtgatcccatctgttctccagggcttgagggcacttagcctgtatgtg
tccctaccctcaggtctggctgtctctgtacttaaagccatcttccaggaggtacatgta
cagtccctgccccaagtggaccgacacacagtctacaatatcatcaccaatttcatgcaa
actcgggaagaagagctaaagggcctaggagctgacttcacatttggcttcatccaggtg
atggatggggagaaggatccccgtaatcttctggttgctttccgcatcgtccatgacctc
atctctagggactacagcctaggaccctttgtagaagagttgtttgaagtgacatcttgt
tattttcctattgattttacccctccacctaatgatccccacggcatccagagagaagat
ctcattctgagtcttcgagctgtgctggcctctacaccacgatttgctgagttcctgctg
ccccttctgattgagaaagtagattctgagattcttagtgccaaactggattctctgcag
actctgaatgcttgctgtgctgtatatggacagaaagagctgaaggacttccttcccagc
ctttgggcttctatacgcagagaggtgttccagacggcaagtgagcgggtggaggcagag
ggcctggcagccctgcattctttgactgcctgtttgtctcgctctgtgctgagagctgat
gctgaggacctccttgactccttccttagcaacattctacaggactgcaggcaccatttg
tgtgagccagacatgaaactggtatggccaagtgccaagctgttgcaggcagctgcaggt
gcatctacccgagcctgtgatcacattaccagcaatgtactgcccttactactggaacag
ttccacaagcacagtcagagcaaccagcggcggacaatccttgagatgatcctcggtttc
ctgaaggtacagccaaaatggagttatgaagacaaagatgaaaggcctctgagtagcttc
aaggaccagttgtgttcactggtattcatggctctaacagaccccagcagccagctgcaa
cttgttggcatcaggacacttacagtcttggggtcacagccagatctcctatcatctgtg
gatttggagctggcagtgggtcatctgtacagactgagcttcctagagcaggattcccag
agttgcagggtggcagcactagaggcatcaggaaccctggctactctcttccctggggcc
ttcagcagccaccttgtacccaagcttgctgaggagctgcacaaagaggaatcaaattta
gttagagaggattggcacaccaaatgttcccggcatctgctctgtctgcaagctttgtca
gctgtttccacacaccccagcatcgtcaaggagacgctgcctctgctgctgcagcatctc
tggcagttgaacaaaggaaatgtggttgcaggagccagtgaagttattgctatctgtcag
agtctcgatcaggtggcagaaaaatgccaacaggaccctgattgctgctggtatttccat
gacacggctgtaccttgcctgcttgccttggctgtacaggcttccataccagagcaggaa
ccctcagttataagaaaggtgctgctggaagatggggtcttgactgccatggcatctgtc
attggcactgccaccactcacttgagccctgagttagctgctcagagtgttacccgcatt
gtgcccctcttcttagatggcaacacctcctttctgcctgaaaacagcttctcaagcaga
ttccagccattccaggatggctccttggggcagaggcggctggttgcactgcttatggct
tttgtctgctccttgcctcgaaatgtggaaatccctcaactgaacagactcatgcgggag
cttttgtcactgagctgctgctacagttgcccattctccgctacagctgctgccaagtgt
tttgcaggactcctcaacaagcaccctgcagggcagcagctagatgaattcctccagctg
gctatggacacagtggaggccagcctgaacccggggccctctcgtagccaggccttcaca
ctgctgctctgggtaaccaaggctctagtactcagataccatcctctcagctcctgcctt
acaaatagactcatgggcctcttgagtgatccagaactaggccctacagctgctgatggc
ttctctctgctcatgtctgactgcactgatgtgctaactcgtgctggccatgcagaagta
cgaatcatgttccgccagcggttcttcacagataatgtgcctgctctggtccaaggcttc
catgctgctccccaagatgtgaagccaaactacctgaagggtctgtctcatgtacttaat
aggctgcccaagcctgtgctcttgccagaactgcccacgctcctttccttgctactggag
gccctgtcctgccctgactctgtggtccagctctctaccctcagctgccttcagcctctt
ctactggaagcaccccaagtaatgagtcttcatattgacaccttggtcaccaagtttctg
aacctcagctccagcccttccatggctgtccggattgctgcacttcagtgtatgcatgct
ctcactcgcttgcctacccctgtgttgctgccatacaaaccacaggtgatccgggcctta
gccaggccgctagatgacaagaagagactggtgcgcaaagaagctgtgtcagccagggga
gaatggtttctgttggggagccctggcagctga

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