Dipodomys merriami (Merriam's kangaroo rat): 138830590
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Entry
138830590 CDS
T11079
Symbol
Rnf43
Name
(RefSeq) E3 ubiquitin-protein ligase RNF43
KO
K15694
E3 ubiquitin-protein ligase RNF43 [EC:
2.3.2.27
]
Organism
dmer Dipodomys merriami (Merriam's kangaroo rat)
Pathway
dmer04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
dmer00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
138830590 (Rnf43)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dmer04121
]
138830590 (Rnf43)
Enzymes [BR:
dmer01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
138830590 (Rnf43)
Ubiquitin system [BR:
dmer04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
138830590 (Rnf43)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ZNRF_3_ecto
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-RING_5
zf-ANAPC11
DUF4381
zf-C3H2C3
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
138830590
NCBI-ProteinID:
XP_069883103
LinkDB
All DBs
Position
Unknown
AA seq
789 aa
AA seq
DB search
MSGGHQLQLAALWPWLLMATLQAGFGHTGLVLAAAVESERSAEQKAIIRVIPLKMDPTGK
LNLTLEGVFAGVAEVTPAEGKLMQSHPLYLCNASDDDNLEPGFISIVKLESPRRAPRPCL
SLASKARMAGERGASAVLFDITEDRAAAEQLQQPLGLTWPVVLIWGNDAEKLMEFVYKNR
KAHVRIELKEPPAWPDYDVWILLTVVGTIFVIILASVLRIRCRPHHSRPDPLQQRTAWAI
SQLATRRYRASCRRARAEQTDSVSSCSSAPMCAICLEEFSEGQELRVISCLHEFHRTCVD
PWLHQHRTCPLCMFNIIEGDSFSQALGPSQSYQEPGRRLHLIRQHPGHAYYHLPPAYLLG
PPRNSAARPPRPRPFLPSQEPSMGARHQRLSRAPHVQAPCEQPHLAVTQHPYAQGWGLSR
LQCPSQHPTACPVPLRRARPHDSSGSGESYCTERSGYLADGPASDSSSGPCHGSSSDSVV
NCTDISLQGIHGSSSTFRSSLSSDFDPLVYCGHEGDLPGKGRHPTVASRPRSLDSVVPTG
ETQVSSHIHYHRHRHHHYKKRFQWHGRKPGPETGVPQSRPVSRTQTQPEPPLSDQRISRP
DLATPSSQLPNLPRLRALTEPAPGAAGATEATEPGRPGNLQPSTLCNLQKSSLPARHPQR
KRQGGPSEPRPASRPQDLTMHPVCQISPPYSPSLAYPWPPEAHPLIFRPPGMDRKLLSEA
PDSGYPSSQPVWLCLTSRRPLGPERPGEGPSEWSFGTPEGRPCPYPHCQVLPAQPGSEEE
LEELCEQAV
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atgagtggtggccaccagctgcagctggctgccctctggccctggctgctgatggctacc
ctgcaggcaggctttggacacacaggactagtattggcagcagctgtggagtctgaacga
tcagcagagcagaaggctattatcagggtgatccccttgaaaatggaccccacaggaaaa
ctgaatctcacgctggaaggtgtgtttgctggtgttgcagaagtaactccagcagaagga
aaattaatgcagtcccatcccttgtacctgtgcaatgccagtgatgacgacaacctggag
cctggattcatcagcatcgtcaagctggagagtcctcgacgggcccctcggccctgcctg
tcactggccagcaaggcccggatggcgggtgagcgaggagccagtgctgtcctctttgac
atcactgaggatcgagctgctgctgagcagctgcagcagcccctggggctgacctggcca
gtggtgctgatctggggtaatgatgctgagaagctgatggagttcgtgtacaagaaccgc
aaggcccatgtgaggattgaactgaaggagcctcctgcctggccagattatgatgtgtgg
atactcctgacagtggtgggcaccatctttgtgatcatcctggcttcagtgctccggatc
aggtgccgccctcaccatagcaggccggaccctcttcagcagcgcacggcctgggccatc
agccagctggccaccaggaggtaccgggccagctgcaggcgggctcgggctgagcagact
gattcagtcagtagctgcagctccgcccccatgtgtgccatctgcctggaggaattctct
gaggggcaggaactacgggtcatttcctgcctccatgagttccatcgtacctgtgtggac
ccctggctacatcagcatcggacctgtcccctctgcatgttcaacatcatagagggagat
tcattctcccaggccttgggaccatctcaatcttatcaggaaccaggcaggagactccat
ctcattcgccagcatccgggccatgcttactaccacctccctcctgcctacctgttgggc
cctccccggaattcagcggccaggcccccacgacctagacccttcttaccatcccaggaa
ccaagcatgggcgctcgacatcaacgcctctccagggctccgcatgtccaggctccctgc
gagcagccgcatctggcagtgacccagcacccttatgcacagggctggggcctgagccga
ctgcagtgcccttctcagcaccccacagcctgccccgtgcccctgcgcagggccaggcct
catgacagcagtgggtctggagagagctactgcacagaacgcagtggctacctggctgat
gggccagccagtgactccagctccgggccctgccatggttcctccagtgactcagtggtc
aactgcacggacatcagcctacagggcatccatggcagcagctccaccttccgcagctcc
ctgagcagcgactttgaccccttggtatactgtggccatgaaggggatctgccaggcaag
gggaggcacccaactgtggcctctagaccccgttctctggactcagtggtgcccacagga
gaaactcaggtttccagccatatccactatcaccggcaccggcatcaccactacaaaaag
aggttccagtggcatggcaggaagcctggaccagaaactggggtcccccagtctaggcct
gtttctcggacacagacacagcctgagccacctttgtctgatcaacgaatcagcagaccc
gacctagcaaccccatcaagccagctccccaacctgccacggctcagagcccttacagag
ccagcccctggagccgctggagccaccgaagccaccgaacctggcagacctggcaacctg
caacccagcaccctttgcaacttgcagaaatctagcctccccgcacgacatccacagagg
aaacggcaagggggtccctcagagcccaggccagcctctcggccccaggatttgactatg
cacccagtttgtcagatctccccaccttacagccccagcttggcatacccttggccccca
gaagcccacccactaatcttcagacctccaggcatggataggaagctgctatcagaagcc
ccagactccggctacccaagctcacagccagtgtggttatgtctgacttcacgccggccc
ctaggaccagaaaggccaggggaagggccttctgaatggagttttggtactcccgagggc
aggccgtgcccttacccacactgccaggtgctaccagcccaacctggctcggaggaggag
ctcgaggagctgtgtgaacaggctgtgtga
DBGET
integrated database retrieval system
