Dipodomys merriami (Merriam's kangaroo rat): 138830591
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Entry
138830591 CDS
T11079
Symbol
Pnn
Name
(RefSeq) pinin
KO
K13114
pinin
Organism
dmer Dipodomys merriami (Merriam's kangaroo rat)
Pathway
dmer03013
Nucleocytoplasmic transport
dmer03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dmer00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
138830591 (Pnn)
03015 mRNA surveillance pathway
138830591 (Pnn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dmer03019
]
138830591 (Pnn)
03041 Spliceosome [BR:
dmer03041
]
138830591 (Pnn)
Messenger RNA biogenesis [BR:
dmer03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
138830591 (Pnn)
Spliceosome [BR:
dmer03041
]
Complex C
Other components
EJC/TREX
138830591 (Pnn)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pinin_SDK_N
Pinin_SDK_memA
Motif
Other DBs
NCBI-GeneID:
138830591
NCBI-ProteinID:
XP_069883108
LinkDB
All DBs
Position
Unknown
AA seq
715 aa
AA seq
DB search
MAVAVRTLQEQLEKAKESLKNVDENIRKLTGRDPNDVRPIQARLLALSGPGGGRGRGSLL
LRRGFSDSGGGPPAKQRDLEGAVSRLGGERRTRRESRQESDPEDDDVKKPALQSSVVATS
KERTRRDLIQDQNMDEKGKQRNRRIFGLLMGTLQKFKQESTVATERQKRRQEIEQKLEVQ
AEEERKQVENERRELFEERRAKQTELRLLEQKVELAQLQEEWNEHNAKIIKYIRTKTKPH
LFYIPGRMCPATQKLIEESQRKMNALFEGRRLEFAEQINKMEARPRRQTMKEKEHQVVRN
EEQKAEQEEGKVAQREEELEETGNQHNDVEIEEAGEEEEKEVGIVHSDAEKEQEEEEQKQ
EMEVKMEEETEARESEKQQDSQPEEVIDVLEMVENVQNVIAEQEVMETNQVESIEPSENE
TSKELEPEMEFEVEPDKECKSLSPPKENVSVVEVEKESEEKEEKESEPQPEPVAQPQSLL
PPQPQSQPQQVHQPQPLSQPETLTLAISQAPPQVIQEQENQLPERKEFPVEPVKLTEVPV
VEPVLTVHSESKSKTKTRSRSRGRVRNKTSKSRSRSSSSSSSSSSSTSSSSGSSSSSGSS
SSRSSSSSSSSTSGSSSRDSSSSTTSSSESRSRSRGRGHNRDRKHRRSMDRKRRDTSGLE
RSHKSSKGSSRDTKGSKDKNSRSDRKRSISESSRSGKRSSRSERDRKSDRKDKRR
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atggcggtcgcagtgagaactttgcaggaacagctagaaaaggccaaagaaagcctaaag
aacgtagatgagaacatccgcaagctcaccgggcgagacccgaatgatgtgagacccatc
caagcccgattgctggccctttctggtcctggtggaggtagaggacgtggtagtttattg
ctgaggcgtggattctcagatagtggaggaggacccccagccaaacagagagaccttgaa
ggggcagtcagtaggctgggcggggagcgtcggacaagaagagaatcgcgccaagagagt
gacccagaggatgatgatgttaagaagccggcactgcagtcttcagttgtagctacctcc
aaagaacgcacacgcagagaccttatccaggatcaaaatatggatgaaaagggaaagcag
aggaatcgacgaatatttggcttgttgatgggtactcttcagaaatttaaacaagaatct
actgttgctactgaaaggcaaaagagacgccaggaaattgaacaaaaacttgaagttcag
gcagaagaagagagaaagcaagttgaaaatgaaaggagagaactgtttgaagagagacgt
gctaaacagacagaactgcggcttttggaacagaaggttgagcttgcgcagctgcaagaa
gaatggaatgaacataatgccaagataattaaatatataagaactaagacaaagccccat
ttgttctatattcctggaagaatgtgtccagctacccaaaaactaatagaagaatcacag
agaaaaatgaatgctttatttgaaggtagacgcctcgaatttgcagaacaaataaataag
atggaggctaggcctagaagacagacaatgaaggaaaaagagcatcaggtggtgcgtaat
gaagaacagaaggcggaacaagaagagggtaaggtggctcagcgagaggaagagttggag
gagacaggtaatcagcacaatgatgtagaaatagaggaggcaggagaagaagaggaaaag
gaagtaggtatagtgcatagtgatgcagagaaagaacaggaggaggaggagcaaaaacag
gaaatggaggttaagatggaggaggaaacagaggcaagggaaagtgagaaacaacaggat
agtcagcctgaggaagttatagatgtgctagagatggttgagaatgtccagaatgtaatt
gctgagcaggaagtgatggaaactaatcaagttgaaagtatagaaccttcagaaaatgaa
actagcaaagaattggagccagagatggaatttgaagttgagccagataaagaatgtaaa
tctctttctcctccaaaagagaatgttagtgttgtagaagtggaaaaagaatcagaggaa
aaagaagaaaaagaatctgaaccccaacctgagcctgtggctcagcctcagtccctcctt
ccaccccagcctcagtctcagccccagcaagtacatcagccccagcctctctctcaacct
gagactttgacattagctatttcacaggcaccacctcaggttattcaggaacaagagaat
caactacctgagaggaaagagtttcctgttgagcctgtaaagctcactgaggtgccagta
gtggaaccagttttaacagtgcactcagaaagcaaaagtaaaaccaaaaccaggagtaga
agtagaggtcgagttagaaataaaacaagcaagagtagaagtcgaagcagtagcagcagt
agttctagtagcagttcaaccagtagcagcagcggaagcagttctagcagtggcagcagt
agtagtcgaagcagttctagtagtagttccagtacaagtggtagtagtagcagagatagt
agcagcagcactactagtagtagtgagagtagaagtcgaagtaggggtcggggacacaat
agagacagaaagcacagaaggagcatggatcggaagcgaagggatacatcaggattagaa
agaagtcacaaatcttcaaaaggtagtagtagagatacaaaaggatcgaaggataagaat
tcccggtctgacagaaagaggtctatatcagagagtagtcgatcgggcaaacgatcttca
agaagtgagagagaccgaaaatcagacaggaaagacaaaaggcgttaa
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