Dipodomys merriami (Merriam's kangaroo rat): 138830768
Help
Entry
138830768 CDS
T11079
Symbol
Rpa1
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit
KO
K07466
replication factor A1
Organism
dmer Dipodomys merriami (Merriam's kangaroo rat)
Pathway
dmer03030
DNA replication
dmer03420
Nucleotide excision repair
dmer03430
Mismatch repair
dmer03440
Homologous recombination
dmer03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
dmer00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
138830768 (Rpa1)
03420 Nucleotide excision repair
138830768 (Rpa1)
03430 Mismatch repair
138830768 (Rpa1)
03440 Homologous recombination
138830768 (Rpa1)
03460 Fanconi anemia pathway
138830768 (Rpa1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dmer03000
]
138830768 (Rpa1)
03032 DNA replication proteins [BR:
dmer03032
]
138830768 (Rpa1)
03400 DNA repair and recombination proteins [BR:
dmer03400
]
138830768 (Rpa1)
Transcription factors [BR:
dmer03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
138830768 (Rpa1)
DNA replication proteins [BR:
dmer03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
138830768 (Rpa1)
DNA repair and recombination proteins [BR:
dmer03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
138830768 (Rpa1)
MMR (mismatch excision repair)
138830768 (Rpa1)
DSBR (double strand breaks repair)
HR (homologous recombination)
138830768 (Rpa1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
IBR
Motif
Other DBs
NCBI-GeneID:
138830768
NCBI-ProteinID:
XP_069883577
LinkDB
All DBs
Position
Unknown
AA seq
616 aa
AA seq
DB search
MVGQLSEGAIAAIMQQGNTSIKPILQVINIRAITTGNSPPRYRLLMSDGLNTLSSFMLAT
QLNSLVEQEQLSSNCICQIDRFIVNTLKDGRRVIILMELEVLKSAEAVGLKIGNPVPYNE
GHGQQQVVPSTVSAASPVVSKPQQQNGSSGAGSTVSKTYGTSKTFGKPAGPGLSHPSGGA
QAKVVPIASLTPYQSKWTICARVTNKSQIRTWSNSRGEGKLFSLELVDESGEIRATAFNE
QVDKFFPLIEVNKVYYFSKGTLKIANKQFSAVKNDYEMTFNNETSVVPCEDDHHLPTVQF
DFTGIGDLENKSKDSLVDILGICKNYEDATKITVKSNNREVAKRNIYLMDTSGKVVTATL
WGEDADKFDGSRQPVMAIKGARVSDFGGRSLSVLSSSTIIMNPDIPEAYKLRGWFDSEGQ
ALDGVSISDQRGGGTGGSNTNWKTLYEVKLENLGQGDKADYFSSVATVVYLRKENCMYQA
CPSQDCNKKVIDQQNGLYRCEKCDREFPNFKYRLILSANIADFQENQWVTCFQESAETIL
GQNAAYLGELKEKNEQAFDEVFQNANFRTFTFRVRVKLETYNDESRIKATVMDVKPVDYR
EYGRRLVTLIRKNALL
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atggtcggccaactgagtgaaggggccattgcggccataatgcaacagggaaacacttct
atcaaacccatcctccaagtcattaatatccgtgctattactacaggcaatagtccaccc
cgttaccgactgcttatgagtgatggattgaacaccctgtcctctttcatgttggcaacc
cagttgaactcccttgttgagcaggaacaattgtccagcaactgtatttgccagattgac
agatttatcgtcaacactctgaaagatggaaggagagtaattattttgatggagttagaa
gttttgaagtcggcagaagcagttggattaaagatcggcaatccagtgccctataatgaa
ggacatggacaacaacaagtagtgccttctacggtctccgcagccagcccagtggtcagc
aaaccccagcaacagaatgggagctcaggagcaggttcgactgtatctaagacgtatggt
acctcaaagacatttggaaaacctgctggaccgggcctctcacacccttctgggggagca
caggccaaagtagtgccaatcgccagcctcaccccttaccagtccaagtggaccatttgt
gctcgtgtcaccaataaaagtcagatccgtacttggagcaattcccggggggaagggaag
cttttctctctagaacttgtggatgaaagtggtgaaatcagagctactgctttcaatgag
caagtggacaagttcttccctcttattgaagtgaataaggtgtattatttctcaaaaggc
accctgaagattgctaacaaacagttctcagctgttaaaaatgactatgagatgaccttc
aataatgagacttctgtcgtgccctgcgaagatgatcatcacttgcccacagttcagttt
gatttcacaggcattggtgacctagagaacaagtctaaagattcacttgtagacatacta
gggatctgcaagaactatgaagatgccactaagatcactgtcaagtctaacaacagagaa
gttgctaagaggaacatctatttgatggatacgtcagggaaagtggtgactgctacgctg
tggggggaagatgcagacaagtttgatgggtccagacagccggtaatggccatcaaaggg
gcgagagtctctgattttggtggacggagcctctccgttctgtcttcaagcactatcatt
atgaatcctgacatcccagaggcctataagctgcgtggatggtttgactcagaaggacaa
gccttagatggtgtttccatctctgatcaaaggggtggaggaacaggaggcagcaacacc
aactggaaaacattatatgaggttaaattggagaacctgggccaaggtgacaaggcggac
tatttcagctctgtagccacggtagtatatcttcgcaaagagaactgtatgtaccaagcc
tgcccatctcaggactgcaataagaaagtgattgaccagcagaatggcctgtatcgctgt
gaaaagtgtgaccgggaatttcctaacttcaaataccgcttgatcttgtcggccaatatt
gccgattttcaagagaatcagtgggtgacttgtttccaggagtcagctgaaacgatcctt
ggacagaatgctgcttaccttggggaactcaaagagaagaatgagcaggcatttgacgaa
gttttccagaatgccaacttccgaactttcaccttcagagtcagggtcaaactggagacc
tataatgacgagtctcgaattaaggccactgtgatggacgtgaagcctgtggactacagg
gagtatggccggaggctggtcacactcatcaggaagaatgccctgctgtga
DBGET
integrated database retrieval system
