Dipodomys merriami (Merriam's kangaroo rat): 138831175
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Entry
138831175 CDS
T11079
Symbol
Utp18
Name
(RefSeq) U3 small nucleolar RNA-associated protein 18 homolog
KO
K14553
U3 small nucleolar RNA-associated protein 18
Organism
dmer Dipodomys merriami (Merriam's kangaroo rat)
Pathway
dmer03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
dmer00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
138831175 (Utp18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dmer03009
]
138831175 (Utp18)
Ribosome biogenesis [BR:
dmer03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
138831175 (Utp18)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40_Prp19
WD40_WDHD1_1st
WD40
WDR55
WD40_CDC20-Fz
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR19_1st
Beta-prop_HPS5
Beta-prop_EML
EIF3I
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
Beta-prop_SPT8
WD40_RFWD3
Beta-prop_CAF1B_HIR1
Cytochrom_D1
Beta-prop_Vps41
NBCH_WD40
WD40_like
WDR90_beta-prop_4th
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
138831175
NCBI-ProteinID:
XP_069884507
LinkDB
All DBs
Position
Unknown
AA seq
558 aa
AA seq
DB search
MPPERRNRTKPDRRAGTRLDRKTQRKPDGRARLDRGGLPRKAGPSSSQRTPPAQSSSATA
LEAAAAAAEAERRLRQRNRQTLEEDIPAEERCLEELVFGDVEEDEGALLRRLRGSQTQHG
GTLDDSEGESEAHDNFPPQKKPVWVDEEDEDEEMVDMKKNRFRKDMMKNVTETKLSKDKL
QKRLKEEFQHAMGGVPAWAETSKQKTSSDDESEEDEDDLLQRTGNFISTSTSLPRGILKM
KNCQHANAERPTTARISSVQFHPCAQVVMVAGLDNSISLFQVDGKTNPKIQSIYLDRFPI
YKACFTANGEEVLATSVHSKVLYVYDMLAGKLVPVHQVRGLKEKVVRRFEISPDGSFLLI
NGIAGYSHLLSMKTKELIGSMKINGRVSACTFSSDSKKIYTSSGDGEVYIWDVNSRRCLN
RFVDEGNLRALSIATSRNGQYIACGSSSGVVNIYNQDSCLQETNPKPIKAIMNLVTGVTS
LTFNPTTEILAIASRKMKEAVRLVHLPSCTVFSNFPVVKKKTISRAQTMDFSPRSGYFAV
GNEKGKALMYRLHHYSDF
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgccgcccgaacggagaaaccgtacgaaaccggaccggagagccggcaccaggcttgac
cggaagactcaaagaaagccagatgggagagccagactggataggggcgggttgccccgg
aaggctggcccttcttcatcccagcggacacctccggcccagtcgagctcggcgaccgcc
ctcgaggcggcggcggcggcggccgaggcagagcgccggctccgccagcggaaccgccag
acgttagaggaggacataccggccgaggagcggtgcctggaggagctggtcttcggcgac
gtggaggaagacgagggcgcgctgctgcggcgtctgcggggctcgcagactcaacatggt
ggaaccttggatgattctgaaggggagagtgaagcacatgataattttcccccccagaag
aaaccagtttgggtggatgaagaagatgaagatgaagaaatggttgacatgaagaaaaat
cgatttcggaaagatatgatgaaaaatgtcacagaaactaaactctcaaaagataagctt
caaaagagactcaaagaagaatttcagcatgctatgggaggagtacctgcatgggcagag
actagtaagcagaaaacatcttcagatgatgaaagtgaagaagatgaagatgatctgttg
cagaggactgggaatttcatatccacatccacttctcttccaagaggaatcttgaagatg
aagaactgccagcatgccaatgctgaacggcctaccactgctcggatttcttcagttcag
ttccacccttgtgctcaggtggtgatggttgctgggttagataattctatttcactcttt
caggttgatggcaaaacaaatcctaaaatccagagtatctatttggataggtttccaatc
tataaggcttgttttactgcaaatggagaagaggttttagccacaagtgttcacagcaaa
gttctttatgtctatgatatgctagctggaaagttagttcctgtgcatcaagtgagaggt
ttgaaagagaaagtagtgagacgttttgaaatctccccagatggatcattcttgcttata
aatggtattgctggatattctcatttactgtcaatgaagaccaaggagctgattggtagc
atgaagattaatggaagagtatcagcatgtactttctcttcagatagtaagaaaatatat
acttcttctggggatggtgaagtttatatttgggatgtgaactctaggaggtgccttaac
agatttgttgatgaaggcaatttacgtgcattaagcattgccacatcaaggaatggacag
tatattgcttgtggttctagttctggagtagtaaacatatacaatcaagattcttgtctc
caagaaactaatccaaagccaataaaagctataatgaacctggttactggtgttacttct
ctgaccttcaatcccactacagaaatcttggcaatagcctcaagaaaaatgaaagaagct
gtcagattggttcatcttccttcttgtacagtattttctaacttcccagttgttaaaaag
aagactatttctcgtgcccaaaccatggatttttctcccagaagtggatattttgctgta
gggaatgagaaaggcaaagccctgatgtataggttgcaccattactcggacttctaa
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