Dipodomys merriami (Merriam's kangaroo rat): 138831933
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Entry
138831933 CDS
T11079
Symbol
Rttn
Name
(RefSeq) rotatin isoform X1
KO
K16484
rotatin
Organism
dmer Dipodomys merriami (Merriam's kangaroo rat)
Brite
KEGG Orthology (KO) [BR:
dmer00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
dmer03037
]
138831933 (Rttn)
Cilium and associated proteins [BR:
dmer03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
138831933 (Rttn)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RTTN_N
Motif
Other DBs
NCBI-GeneID:
138831933
NCBI-ProteinID:
XP_069885074
LinkDB
All DBs
Position
Unknown
AA seq
2230 aa
AA seq
DB search
MALPGLVRKLGHPLAEIRERALRSVLCKLEHGLTCPADLVQERLLFLHLLEWFNFPSVPL
QEEVLSLLSKLVKYPSAVQHLTELGAVEFLSKLRSNVEPNLQAEIDGVLDGLFVLPSEVS
AVSCASYETNHAELLQQPEILTGGYFPQDKSNLQQMDLPPRSVAVNQNAKCLKFSTFPWL
PLTATDRHVLSSNEGSLRSSNHTLIWNTCELLKDVIMQDFPAEIFLQRPKIVQSLLSLLK
LAFGGDGKHRLALQSVSCLQQLCICLRNRLNFHRDPHFFSNKQDTISQNSSLSYCHEARG
THQSQNLSPGSSSPRPSVVGRTGQRPRGDGQDWDAVSSSGSSSHAHVNSRLSGHSPLDLG
HMDLPELDMEDTLELQFQQLSLPQFCVAVLESAAPLLRTGSRQMIIRVLELLTEDITLIG
EAISTEIWDDNSLFAIDMKEKLLMVLESLGDTLCYRKSSAGSEQTEAMQVHHRMTFVSVG
LFVVRLLQILLPVEKASEFLPEPMSAALFLLCLDMPVALEYPNSHDSAVAYLEQLNPENY
SVYKRTAEAVYSIECTCNFLSDIEKEGEKNFLELVELADQALRSFSYHQHFSLIKEIISI
CSKISRSAQASPLLQGESQKVLLRMLAHPVPRVKVEAYHCCLEVVKECLGVHNVTKPVSS
LCSGIHFLLHPKVLYEISAFGIQEPKNEVNAAAKAILLYLLQGRLMMTAPTWNKFIESLC
PVIPVLQGYADPEDPLGNCILLLSKASSEAGEGILPHITRLRSVLRLLLVKKPSVRSLAL
KLIAFHLTSEEGADTKRPLIDARVLARVTNLFIVKKPIELKLDDGRDLVIKLETVEKVYE
IFTSDDVDLVLRRSAAEQLVVIMQDIKMHAVVKKLCLIDKIIGYLNKCVSQDGKATECLV
KPCVTLLRKLLCADPVMRASLSYQSSLLCLLLRVSLIFHEDCTIVTEVGALFCLLLFDEV
STMDMWSVNPSSEPSSPSVFSLPVSVFRRYHLPIHVIGHHVVSPYSIVLPLTADCLALKL
VSDMLRMAWNLSWYHGSDNLLKQINSETKIQKFVDTLLLSPEDILTLKATHTASGLQDCL
QSIVQAAAHRDVRAAVTRMGFYLLNDKLSLKSAAGPCGVTLKSLSWHTVLNRFLQVLPAC
IEDEKLLIDIIHFLNKLIKVQRKNPSVELLNWILELLLRHGPSPLLDLLVPTDTQAGADV
DDIRTAVRQQLQKELMALFSTMLLSVTALTDRKCLELFYVFQTQLSLKLLQCLRVTDAPH
FYGLPSLERTLHGMAHLTTFPGWSSHSPLTKPLEICVKYLSGLLEVITSFYVERGGNAMS
FMGKGVTKSTILCLLHLSHEMMAQAPSSEWMSHWFLPLGTHSEEPSPQQGLAWLIPLWVD
RDPEVRFTSLGLGAALTTLEAGCVALTSSCQNISGGLWGTVLSILLDPLECSVVRREAAF
IFQNLLIIPMPSEVIKDYTWQGPCVHDEDSGMSLTGKPALQALLYHYHFYEHLTQMVKHC
FLGRYIFHSTSSPFAGTSGGNDLNSLDDSFKFWRASSRMSSQDHDPSSLSTSETMVTASV
ETADFHPLVSAVNLPPEASHEQFVDQGPHGAIPSRPLRDSSLSARLSKPVTPSLVTPSLL
SAVCSLLDNLLVVAPRDTADALQQASLPELLCSIVDVPLMEMCIQDLRTPLPASPPVEDT
QAQISFLLEYLSSLFRLLQSCLLVDTNLVTQDKILKPLITNVIGVFTIVIKDISDAELES
AFYLMWTHVCGLLTTLLRKAGSVSLPSVTSALAKHWEAVTDMFCRCVGLSIRCPALCSAS
LQLLSVLLMEEEKQRVQSKGRASVCPALTVASLLDEGQEHQKSAERLNEVILQCYEGKSS
KDPLKRPATNALLSLLAASRRAQRHALKADLIDSCMEQMKHINAQLSLDSLRPGKAVLKK
KEDGFTKELGTTMQLLRNCLYQNEECKEAALGAHLVPVVHSLWPWLLMDDSLMQIALQLL
CVYTANFPNGCSSLCWSSYGQYVQAAHRGASSSLMLCVLKLASQVPLESTNVQQMIFMFL
SNLALSHDCKGVIQKSNFLQNFLSLPLPKGGNKHLSSLAVLWLKLLLNISFGEDGQQMIL
RLDGCLDLLTEMSKYRPRSSPHLPLLISHNICFSPASKPKILANEKVITMLAACLESDHQ
DAQRIGAAALWALTYNYQKAKTTLKNPSIKRRVDEAYSLAKRTFSDSEENPLNAYYLKCL
ENLVQLLNSS
NT seq
6693 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgccggggctcgtcaggaaactcggtcacccgctggcggagatccgggagcgc
gcgctccgcagcgtcctctgcaagctggagcacgggctcacctgtcccgccgacctcgtc
caggagaggctgctcttcctccatctgctggagtggttcaacttcccgtccgtccccctg
caagaagaggtcctcagcctgctgagcaaattggtgaagtatccctcagcagtccagcac
ttgactgaacttggtgccgtggagtttctatccaagcttcgttctaatgtggaaccaaac
ctgcaggcagaaattgatggcgttctggatgggctttttgttcttccttcagaagtttct
gcggtgtcttgtgcctcctatgaaaccaaccatgccgaattgctccagcaacctgaaatc
ttaacaggaggatattttccccaagacaaaagtaacctccagcagatggacttgcctcct
cggtctgtggcagtaaatcagaatgcgaagtgtttgaagttttctacgtttccttggcta
cccctgactgccacggacagacatgtcctctcctccaatgaaggctctttgagaagtagt
aatcacactttgatctggaacacctgtgaacttttgaaggacgttatcatgcaagatttt
cccgctgagatttttcttcagaggcccaaaattgttcagagccttttgtccctgttgaag
ctggccttcggaggagatgggaagcaccgcctggcgctgcagtcagtgtcctgcttgcag
cagctgtgcatatgtttaagaaatagacttaactttcaccgagacccgcattttttctct
aataaacaagatacaatttcccagaattcttccttgtcttactgtcatgaagcacgaggt
actcatcagtcccagaacctgtccccaggaagcagtagcccccggccttctgtggttggg
cgcacaggccagcgccccaggggagatggccaggattgggatgcagtgtcctccagcgga
agcagcagtcatgcgcatgtgaactctaggctctctggccattcccctctggatctgggg
cacatggacctgccagagctggacatggaggacacgctggagctacagtttcagcagctc
agccttcctcagttctgtgtggctgttctagagtctgcagctccgctcctaaggacaggt
agtagacaaatgataataagagttctggaattgctcacagaggatataaccttgattggt
gaagcaatttcaactgaaatctgggatgacaatagcctttttgctatagatatgaaagag
aaattgctcatggtgttggagtccctgggagataccctgtgttaccgtaagagcagtgct
ggctcagaacaaacagaggccatgcaggtgcatcacaggatgaccttcgtcagcgttggg
ctgtttgtagttcgcctgttgcaaatacttctcccggtggaaaaggcaagcgagttttta
ccagagcccatgtcagcagcgttatttctcctttgcttggacatgccagtggctttggaa
tatccaaatagtcatgattctgcggtggcctatttggaacagctgaatcctgaaaattac
agtgtttataaacgaactgcggaggctgtgtattccattgaatgtacctgtaacttccta
tctgatattgagaaggagggagagaagaacttcttagaattagtggagctggcagaccaa
gccctgcgcagcttttcctaccatcagcatttctccctaataaaggaaatcatctccatt
tgttcaaagatctccaggtctgcccaggccagtcccctgctccagggagaaagtcagaag
gtgctgctccggatgttggcccacccagtgccacgcgtgaaagtggaagcataccactgc
tgcctggaggttgtgaaggaatgcttaggtgtccataatgtcactaaacccgtgtcttcg
ctttgtagtggaattcattttctacttcatcccaaagttctgtatgaaatctctgcattt
ggtattcaagaacccaaaaatgaggtgaatgcagcggccaaggccattctcttgtatctg
cttcagggtcgattgatgatgacagcaccgacctggaacaagttcatcgagtctctctgt
cctgtcattccagttctgcagggctatgctgacccagaagatcccttgggtaactgcatc
ctccttctaagcaaagcaagttctgaggcgggagaagggatcctcccccacatcaccagg
ctgaggtccgtgctgcgacttctattggtgaaaaagccatcggttcgctcactagcactg
aagctgatagcctttcatctcacaagtgaagaaggggctgatacaaagcgccccttaata
gatgccagagttcttgccagagttactaatttatttattgtgaaaaaacctattgaactc
aaattagatgatggaagagacctggtcattaagttggagactgttgaaaaggtatatgaa
atcttcacctccgatgatgttgacctggttttgagacggtcagctgcagagcagctcgta
gtaatcatgcaagatattaaaatgcatgctgtggtgaaaaagttatgcttaattgacaaa
ataatcggctatttgaataaatgtgtgagtcaagatggcaaggctacagagtgcttggtg
aagccgtgtgtcaccctcctgaggaagcttctctgtgctgatcctgtcatgcgtgcatct
ctgtcgtaccagtcttcactcttgtgcctgttactcagagtttccttgatatttcatgaa
gactgtaccatagtgactgaagttggagcattgttttgtcttctgttatttgatgaagta
tcaaccatggatatgtggtctgttaatccttccagtgaaccttcttcaccatccgtcttc
agtttgcccgtttcagtttttaggaggtatcatctgccaatacatgtaattggccaccat
gttgtgagtccttactcaatagttttgccattaactgctgattgcttggccttgaagctg
gtgtccgacatgctgagaatggcttggaacctgtcctggtaccatgggagtgataatcta
ctgaaacaaataaactctgaaactaaaatccaaaagtttgtagatacactactgctgtcc
ccagaggacatcctcacactgaaggccacacacacggctagtgggctgcaggactgcctt
cagtccattgttcaggctgcggcccacagggatgtgagggctgctgtcaccaggatgggt
ttttatcttctgaatgacaaactgtctttaaagagcgccgctggcccatgtggagttacc
ttgaagtccttgtcctggcacacagtgctaaacaggtttttacaagtgcttcctgcttgc
atagaagatgagaaactgctaatagatatcatacattttctaaataagttaataaaagta
caaagaaaaaatccatcagtagaacttctaaattggattctagaattactccttagacat
ggtccaagcccactcttagacctgctggttccgacagacacccaggctggagcggacgtg
gacgacatccggacggcagtcaggcagcagcttcagaaggaactgatggctcttttcagt
accatgctgcttagtgtcacggccctcactgacaggaaatgcttggaacttttttatgtt
ttccaaacacagctgtccctgaaattgctccagtgtctgagagtaacagatgctcctcat
ttctatggcttgccttcccttgagcggacattacatggaatggctcacctcaccacattt
cctggctggagctcccattctcctctcacaaagcctcttgaaatttgtgtgaagtacttg
tcaggtctccttgaggttattacttctttttatgtggagcgtgggggaaatgctatgtcc
ttcatggggaaaggagtcacaaagagcaccattctttgcttgctccacttgtcccatgag
atgatggcccaggctccaagctcggaatggatgtcacattggtttttgcctttgggcact
cacagcgaagaaccctctcctcagcaaggcctggcctggttaattccgttatgggttgat
cgggacccagaggtgagattcacctcactgggattaggagcagcactgaccactcttgag
gctggctgtgtggccttgacgagcagttgtcagaacatttctggtgggctctggggcact
gtgctgagcattcttctggacccactggaatgcagtgtggtgcgccgggaggctgcattt
atttttcagaatctccttataattccaatgccttcagaagttataaaggattatacttgg
cagggcccctgtgtccatgatgaggactctggcatgtcactcacaggaaaacctgccctt
caagctcttttgtatcactaccacttttatgagcatttgacacagatggtgaaacattgt
ttcctaggacgatatattttccattccacatcttctccttttgctgggacttcggggggc
aatgacttaaatagtttagatgactctttcaagttttggagagcctcgtccagaatgtcc
agtcaggatcatgatccaagttctctctccacctcagaaacaatggtgacagcttcagtg
gaaactgctgactttcacccacttgtgtcagcagtaaatcttccgcctgaagcttcgcat
gagcagtttgtggatcaaggtccacatggagccataccatcacgacctctccgtgactca
tccctgtccgcccgactgtccaagccggttaccccatctcttgttaccccatctcttctc
tcagcagtctgcagcctcttggacaacctcttggtagttgctccaagagacactgcagat
gccttgcaacaagccagtctcccagagcttctctgtagcattgtggatgtcccactcatg
gagatgtgcatccaggacctcaggaccccactacctgcctctcctccagttgaagacact
caggcacagatttcctttctcctggaatatctgtcctcattgttcaggcttctgcagtcc
tgtttactggtagatactaaccttgtgacacaggacaaaattctgaagccactaatcact
aatgtcattggagttttcaccatagtcatcaaagatatatcagatgcagagttggagtcg
gcgttttatctcatgtggacacatgtgtgtggtcttctgaccacactcctgaggaaagcc
gggtctgtctccctcccatctgtcacttccgctctggccaagcactgggaagcagtgact
gatatgttctgcagatgtgtgggcttgtcgatcaggtgccctgccctgtgttctgccagc
ctgcagctcctgtctgttctcttgatggaggaagaaaaacagcgtgtgcagagtaagggc
agagcaagtgtatgccctgctctgacggtggcttccctgctggatgaagggcaggaacac
cagaaatctgcagaaagactcaatgaggtcattcttcagtgctatgaaggaaaatcctcc
aaagatcccctgaaaagacctgcaacaaatgccctgctgtcactcctggctgccagcaga
agagcccagaggcatgccctgaaagctgatctcatagacagctgcatggagcagatgaag
cacattaatgctcaactgagcctagattctctgaggcctgggaaagccgtactgaagaaa
aaggaggacggtttcaccaaagagctcggcactaccatgcagcttctaagaaactgcctg
tatcaaaatgaagaatgtaaagaagcagctctcggcgctcatcttgtccctgttgtgcac
tctctctggccttggcttttgatggacgattcactgatgcaaattgccttgcagcttctt
tgtgtctacaccgcaaattttcccaatggttgcagttctctttgttggtcaagttacggg
cagtatgtccaagctgcacacagaggagccagcagcagcctgatgctgtgtgtcctgaag
ttggcctcgcaggttcctctggagagcacaaacgtccagcagatgatcttcatgtttctt
tcaaacctggctttgtctcacgactgtaagggagtaatccaaaagagtaacttcttacag
aactttctatctctaccattgccaaaaggaggaaataaacatctcagtagcctggctgtt
ctctggttgaagttactcctgaatatatcgtttggagaagatgggcagcaaatgattctg
aggctggatggctgtttagaccttctcacagagatgagcaagtacaggccgaggagcagc
ccgcatctgccccttcttatctctcataacatttgcttcagcccggcgagtaagcccaag
atcctggcgaatgaaaaagtcattactatgcttgcagcctgtctagaaagtgatcatcaa
gatgctcagaggattggagcagctgcactttgggctctgacttacaattaccagaaggca
aaaacaactttgaaaaatccatccataaaaagaagagtggatgaagcatattccttagca
aaaagaactttctcagactcagaggaaaacccactaaatgcctactatttaaaatgtctt
gaaaacctcgtgcagctgctgaactcttcctga
DBGET
integrated database retrieval system
