Dipodomys merriami (Merriam's kangaroo rat): 138832282
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Entry
138832282 CDS
T11079
Symbol
Itgb5
Name
(RefSeq) integrin beta-5 isoform X1
KO
K06588
integrin beta 5
Organism
dmer Dipodomys merriami (Merriam's kangaroo rat)
Pathway
dmer04145
Phagosome
dmer04148
Efferocytosis
dmer04151
PI3K-Akt signaling pathway
dmer04510
Focal adhesion
dmer04512
ECM-receptor interaction
dmer04810
Regulation of actin cytoskeleton
dmer04820
Cytoskeleton in muscle cells
dmer05165
Human papillomavirus infection
dmer05205
Proteoglycans in cancer
dmer05410
Hypertrophic cardiomyopathy
dmer05412
Arrhythmogenic right ventricular cardiomyopathy
dmer05414
Dilated cardiomyopathy
Brite
KEGG Orthology (KO) [BR:
dmer00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
138832282 (Itgb5)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
138832282 (Itgb5)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
138832282 (Itgb5)
04148 Efferocytosis
138832282 (Itgb5)
09144 Cellular community - eukaryotes
04510 Focal adhesion
138832282 (Itgb5)
09142 Cell motility
04820 Cytoskeleton in muscle cells
138832282 (Itgb5)
04810 Regulation of actin cytoskeleton
138832282 (Itgb5)
09160 Human Diseases
09161 Cancer: overview
05205 Proteoglycans in cancer
138832282 (Itgb5)
09172 Infectious disease: viral
05165 Human papillomavirus infection
138832282 (Itgb5)
09166 Cardiovascular disease
05410 Hypertrophic cardiomyopathy
138832282 (Itgb5)
05412 Arrhythmogenic right ventricular cardiomyopathy
138832282 (Itgb5)
05414 Dilated cardiomyopathy
138832282 (Itgb5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dmer04131
]
138832282 (Itgb5)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
dmer04515
]
138832282 (Itgb5)
Membrane trafficking [BR:
dmer04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
138832282 (Itgb5)
Cell adhesion molecules [BR:
dmer04515
]
Integrins
Integrin beta subunits
138832282 (Itgb5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_beta
Integrin_B_tail
EGF_integrin
PSI_integrin
Integrin_b_cyt
EGF_2
I-EGF_1
vWA_SIBA-E
EGF_TEN
EGF_Teneurin
DUF2975
Motif
Other DBs
NCBI-GeneID:
138832282
NCBI-ProteinID:
XP_069886116
LinkDB
All DBs
Position
Unknown
AA seq
799 aa
AA seq
DB search
MPRGPAPFYACLLGLCALVPRLAGLNICTSGSATSCEECLLIHPKCAWCSKEYFGSPRSV
TSRCDLKANLIRNGCDGEIESPVSSTHIRRSLPLSNKGSSTMGSDVIQMMPQEVALNLRP
GDQTTFQLQVRQVEDYPVDLYYLMDLSLSMKDDLDSIRNLGTKLAEEMRKLTSNFRLGFG
SFVDKDISPFSYTAPRYQTNPCIGYKLFPNCVPSFGFRHLLPLTDRVDSFNEEVRKQRVS
RNRDAPEGGFDAILQAAVCKEKIGWRKDALHLLVFTTDDVPHIALDGKLGGLVQPHDGQC
HLNEANEYTASNQMDYPSLALLGEKLAENNINLIFAVTKNHYMLYKNFTALIPGTTVEIL
HGDSKNIIQLIINAYSSIRSKVELSVWDQPEDLNLFFTATCQDGVSYPGQRKCEGLKIGD
TASFEVSVEARSCPSRHTEHKFALRPVGFRDSLQVAVAYSCTCGCSAGLEPDSIRCSGNG
TYVCGLCECNPSHLGTRCECREGENQSGYQNLCREAEGKPLCSGRGECSCNQCSCFESEF
GRIYGPFCECDSFSCARNKGVLCSGHGECHCGECKCHAGYIGDNCNCSTDISTCRAKDGQ
ICSDRGHCICGQCQCTEPGAFGETCEKCPTCPDACSTKRDCVECLLLRPGKPDNQSCQHL
CKDEVITWADTIVKDDQEAVLCFYKTAKDCVMMFTYAELPSGKSNLTVLKEPECGSAPNT
VTILLAVVGSILLIGLALLAIWKLLVTIHDRREFAKFQSESSRARYEVALNPLYRKPIST
HTVDFTFNKFNKSYNGTVD
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgggggcccgcacccttctacgcctgcctcctggggctctgcgcgctcgtgccg
cgcctcgcaggactcaacatatgtaccagcggaagtgccacctcttgcgaagaatgtctg
ctaatccatccaaaatgtgcctggtgctccaaagagtactttggcagcccaaggtctgtc
acctcacggtgtgacttgaaggcaaacctcatccgtaacggctgtgatggtgagattgag
agcccggtcagtagcacccatatccggcggagcctgccactcagcaacaaaggctccagc
accatgggctccgacgtcatccagatgatgccacaggaagtcgccctaaaccttcggcct
ggtgaccagactactttccagctccaagtgcgccaggtggaagactaccctgtggatctg
tactacctgatggacctttccctctctatgaaggacgacttggacagcatccgcaacctg
ggcaccaaactcgccgaggagatgaggaagctcacgagcaacttccggttgggttttggg
tcctttgttgacaaggacatctctcctttttcctacacagcaccgaggtaccagacgaat
ccatgcattggttacaagttatttccaaactgcgtcccatcctttgggttccgccatctg
ctacctctcacagacagagtggacagcttcaatgaggaagttcggaaacagagggtgtcc
aggaaccgcgatgcccccgaggggggctttgatgcaatcctccaggccgctgtctgcaag
gagaagattggctggcggaaagatgcattgcaccttctggtgttcacaacagatgatgtg
ccccacatcgcactggatggaaaactaggagggctggtgcagccccacgatggccagtgc
cacttgaatgaggccaatgaatatactgcatccaaccagatggactacccatcccttgcc
cttcttggagagaagttggcagagaataacatcaatctcatctttgctgtgacaaaaaac
cactatatgctctacaagaattttaccgctctgatacctggaaccacagtggagatttta
catggagactccaaaaatatcattcaactgattatcaatgcatacagtagtatccggtct
aaagtggagctgtctgtctgggaccagccagaagaccttaatctcttcttcactgctacc
tgccaagatggtgtatcctacccaggccagaggaagtgtgagggtctgaagattggagac
acagcatcttttgaggtgtcagtggaggcccggagctgccctagcagacacacagagcac
aagttcgccctgcggcccgtggggttccgggacagcctgcaggtggcggtcgcctacagc
tgcacatgcggctgcagtgcggggctggagcccgacagcatcaggtgcagcgggaacggc
acttacgtctgcggcctgtgtgagtgcaaccccagccacctgggcaccaggtgtgagtgc
cgggaaggagagaaccagagcgggtaccagaacctgtgccgggaggctgagggcaagccg
ctgtgtagcgggcgcggggaatgcagctgcaaccagtgctcctgctttgagagcgagttc
gggaggatctacgggcccttctgcgagtgtgacagcttctcctgcgccaggaacaagggc
gtcctctgctcaggccacggcgagtgtcactgtggagagtgcaagtgccatgcaggttac
attggagacaactgtaactgctcaacagacatcagcacatgccgggccaaggacgggcag
atctgcagtgatcgtgggcattgcatctgtgggcagtgccagtgcacggagcctggagcc
tttggggaaacatgtgagaagtgcccaacctgcccggatgcttgcagtacaaagagagat
tgtgtggagtgcctgctgcttcggccggggaaacccgacaaccagtcctgccaacacctg
tgcaaggatgaggtgatcacctgggcggacaccatcgtgaaagatgaccaagaggccgtg
ctgtgcttctacaaaactgcaaaggattgcgtcatgatgttcacctacgccgagctgccc
agtgggaagtccaacctgactgtcctcaaagagccagagtgtggctcagcccccaacacc
gtcaccatcctgctggctgtggtgggcagcatcctgctgatagggcttgctctcctcgcc
atctggaagctgcttgtcaccatccatgaccgcagagagtttgccaagttccagagtgag
agctccagggctcgctacgaagtggccttgaatcccctgtacagaaagcccatctccaca
cacacagtggacttcaccttcaacaagttcaacaaatcctacaatggcacagtggactga
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integrated database retrieval system
