Dipodomys merriami (Merriam's kangaroo rat): 138833172
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Entry
138833172 CDS
T11079
Symbol
Dmxl1
Name
(RefSeq) dmX-like protein 1 isoform X1
KO
K24155
rabconnectin-3a
Organism
dmer Dipodomys merriami (Merriam's kangaroo rat)
Pathway
dmer04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
dmer00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
138833172 (Dmxl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dmer04131
]
138833172 (Dmxl1)
Membrane trafficking [BR:
dmer04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
138833172 (Dmxl1)
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
138833172 (Dmxl1)
RAVE complex
138833172 (Dmxl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rav1p_C
Beta-prop_THOC3
Beta-prop_WDR5
WD40
Beta-prop_WDR3_1st
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_IFT122_1st
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WDR55
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
WD40_Gbeta
EIF3I
Beta-prop_IFT140_1st
Beta-prop_WDR36-Utp21_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_VPS8
Beta-prop_NOL10_N
Beta-prop_EML
Beta-prop_DCAF4
Beta-prop_RIG_2nd
Beta-prop_WDR19_2nd
Beta-prop_HPS5
MIOS_WD40
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
138833172
NCBI-ProteinID:
XP_069887629
LinkDB
All DBs
Position
Unknown
AA seq
3047 aa
AA seq
DB search
MNLHQVLTGAVNPGDHCFSVGSVGDQRFTAYASGCDIVILGSDFERLQIIPGTKHGNIQV
GCVDCSVQQGKIAASYGNVISIFEPVKLPKQTKNLEFYSQWQKSGQFFLESIAHNITWDP
TGSRLLTGSSCLQLWSNTNLPKQTEDENPDGTDSNFEDWRCIWHCKTASQVHLMKFSPDG
EFFATAGKDDCLLKVWYNVENWRTAVTSPDRSSEKQSQGEIDFSFVYLAHPRAVDGFSWR
KTSKYMPRASVCNVLLTCCKDNVCRLWVETFLPNDCLLYGGDCNRWSEPINLTNNFKRNA
SSKERVHNALEINLRHFRRGRRRSLALVAHTGYLPHQQDAHQVHRNTPLHANALCHFHIA
ASINPATDIPLLPSITSLSLRENQEESGPFVVHWLNNKELHFTLSMEVFLQQLRKSFEQP
SSEASMEDSNQADVKSDEEMDDGADDLKINHEKKELGEDKMVPNSSFAPLPSAAIDHEIE
VLLSEWSKNADMLFSIHPMDGSLLVWHVDWLDEYQPGMFRQVQVSFVSRIPVAFPTGDAN
SLCKSIVMYACTKNVDLAIQQGRQKPSGLTRSTSMLISSGQNKSSNSLKLSIFTPNVMMI
SKHADGSLNQWLVSFAEESAFSTVLSISHKSRYCGHRFHLNDLACHSVLPLLLTTSHHNA
LRTPDVDNQKKPHDSVNIEECSLVHQNKSTADVAFQDPNAVYSELILWRVDPVGPLSFSG
GVSELARINSLHVSAFSNVAWLPTLIPSYCLGAYCDSPSACFVASDGQYLRLYEAVIDAK
KLLCELSNPEISKYVGEVFNIVSQQSTARPGCIIALDPITKLHGRKTQLLHVFQEDFILN
NLEKKSLGKDSIPSDTGSLSNGFSEKFYLVVIECTQDNRSLLRMWNLHLKSIPVSLDERI
DMKISEVVWQPEEHYSSSPERIPTPFAQKFQACRANLQSTSKLSLCSEMVYSQELQLPEG
VEIISVKPSAGHLSSSSIYPVCSAPYLLATSCSDEKVRFWRCRVTDGEPATSKNGKIDLT
YIWEEWPLLIEDGLQSNSSISVPGRPVEVSCAHTNRLAVAYKHLASNSRSSQDVVMHVSI
FECESTGGSCWVLEQTIHLDDLSTMLDSGISIDSNLVAYNKQETYLFSKESITTNTKHLV
HLDWMSREDGSHILTVGIGSKLFMYGPLSGKVQEHIGKESLAFPLWESTKVVPLSKFVLL
RSVDLVSSVEGSPPFPVSLSWVRDGILVVGMDCEMHVYSQWQPSSKQEPARTDSYGGSTP
SVLSLVRQSNSSSSGLQPTKKTLTRSMTSLAQKICGKKTALDPSVDMEDSGLFEAAHVLS
PTLPQYHPLQLLELMDLGKVRRAKAILSHLVKCIAGEVVALSEAESNHDRRLRSLTISAS
GSTTRDPQAFNKTESTDYTEIDSVPPLPLYALLAADDDRCYSSLEKSSNESSFNKSNQLS
KESYDELFQTSALMPDIHVLESGEENTKPRVIDLSQYNPTYFGPEHAQVLSGHLLHSSLP
GLSRMEQMSLMALADTIATTSTDIGESRDKSQGGETLDECGLKFLLAVRLHTFLTTSLPA
CRAQLLRQGLSTSHFAWAFHSVAEEELLTMLPAMQKHDPTWSELRAMGVGWWVRNKRILR
TCIEKVAKAAFYRNNDPLDAAIFYLAMKKKAVIWGLYRSQKDTRMTQFFGHNFEEERWRK
AALKNAFSLLGKQRFEHSAAFFLLAGCLRDAVEVCLEKLNDIQLALVIARLYESEFDKST
TYKSILRKKVLGIDSRVSELSSSDISVHCDPFLRSMAYWILEDYSDALETLIKQPVREDD
DQVLVSACNPAVFNFYNYLRTHPVLLRRHFGSSDTFSAQLGLPGQSGLAGTISLSERRLF
FTTASAHLKAGCPMLALEVLSKMPRVIKKIKPFCRASGFLDSSKDSSPVKLDAKEDKSSA
INWSQSLTNGFDSSSEGSSEKQSNSTLSFDWSQPSVVFQDDSLELKWDSDNDEENEDLPI
CMKELKPLQRKVDAKLDEVSSYTDSFSTLDENDILNPSEDIIAVQLKFRACLKILTVELR
TLSTGYEIDGGKLRYQLYHWLEKEVVALQRTCDFCSDVEELPTADGRNRDEFGFSKDADG
LHHQTKAKQLRESFQEKRQWLLKYQSLLRMFLSYCILHGSHGGGLASVRMELILLLQECQ
QETSDPLFPSPLSEQTSVPLLFACTASAKTVVANPLLHLSNLTHDILHAIINLDSPPHPD
SQSNKVYVMHTLAASLSACIYQCLCGSHNYSSFQTNQFTGMVYQTVLLPHRHSLRTGSLE
EAVTPNTAPAQWPGITCLIRLLTSSGEEAQSGLTILLCEILTAVYLSLFIHGLATHSSNE
LFRIVAHPLNEKMWSAVFGGGARVSSKEQTHAKALHVSSLVEEGEKQNKHFRPSKTPCQE
SALLTSSSPPIDPESPAVKEKFIPPELSIWDYFIAKPFLPPSQSRPEYDSEESLESDDDD
NEDDVLASDFHLQEHSNSNSYSWSLMRLAMVQLVLNNLKTFYPSAGHDLAELPVSSPLCH
AVLKTLQCWEQVLLRRLEIHGGPPQNYISSHTSEESLSAGPAILRHKALLEPTNTPFKSK
HHLALSVKRLWQYLVKQEEVQETFIRNIFTKKRCLNESLEDNSETIKNSMMEEPNINKIE
ADLGYPGGKARIIHKESDIITAFAVNKANRNCIAIASSHDVQELDVSGILATQIYTWVDD
DVEMEPKGSEDFLVIHAHDDLTAVQGTTPYTHSNPGTPINMPWLGSTQTGRGASVVCKMI
KKPINNVRRMTSHPTLPYYLTGAQDGSVRMFEWGHSQQITCFRSGGNSRITRMRFNYQGN
KFGIVDADGYLSLYQTNWKCCPVTGSMPKPYLTWQCHNKTANDFVFVSSSSLIATAGLST
DNRNICLWDTLVAPANSLVHAFTCHDSGATVLAYAPKHQLLISGGRKGFTCVFDLRQRQQ
RQLFQSHDSPVKAIAIDPTEEYFVTGSAEGNIKIWSLSTFGLLHTFISEHARQSIFRNIG
TGVMQIETGPANHIFSCGADGTMKMRILPDQFSPFNEVLKNDAKLVL
NT seq
9144 nt
NT seq
+upstream
nt +downstream
nt
atgaacctgcaccaggtgctgacgggcgccgtgaaccccggcgaccactgcttctccgtg
ggcagcgtcggcgaccagcgcttcacggcttatgcttctggatgtgacattgtaattctg
ggaagtgattttgaaagattacagattatcccaggaacgaaacacggaaatatccaagtg
gggtgtgttgactgttcagtgcagcaaggcaagattgcagcatcctatggaaatgttatc
tctatctttgaaccagttaagctgccaaaacaaacgaaaaatttggaattttatagtcag
tggcagaaaagtggtcagttttttctggaatcaatagcacacaatataacttgggatccc
acaggcagtcgtctgttaactggttccagctgtttgcaactctggtccaatactaactta
ccaaaacaaactgaagatgaaaatccagatggaacagatagtaactttgaggattggagg
tgcatttggcattgcaaaactgcttcacaagttcatttgatgaaattctcaccagatgga
gaattttttgccactgctgggaaggatgactgtctcttaaaagtttggtataatgtagaa
aactggcggacagctgttacctctccagatagaagttcagaaaaacaatcccaaggagaa
attgacttttcttttgtatatctggctcatcctcgagcagtagatggattttcctggcgt
aaaacaagcaaatacatgcctagggcttctgtatgtaatgtactattgacctgctgcaaa
gataatgtgtgtcgactttgggtagaaacatttttaccaaatgattgtttgttgtacgga
ggagactgcaaccgttggtctgaaccgattaatttaacaaataatttcaaaagaaatgct
tccagtaaagaaagagttcacaatgctctagaaataaacctgaggcattttcggagaggt
cggaggaggtcacttgcacttgtggcgcatactggctatctgcctcaccagcaggatgca
caccaggtccacaggaacactccactgcacgccaatgcactctgccactttcatattgcg
gccagcatcaacccagccacagacattccacttcttccatctataacatctctgagttta
agggaaaatcaagaagagagtggaccttttgtagtacactggttaaacaataaagagctg
cattttactttgtctatggaagtcttcttacagcaacttagaaaaagttttgaacagcca
tcttctgaggccagtatggaagactccaatcaggcagatgtaaaatctgatgaagaaatg
gatgatggtgctgatgatctgaaaataaatcatgaaaagaaggaactgggagaagataaa
atggtaccaaactcaagttttgcaccattaccatcagctgccattgatcatgagattgaa
gtacttctgtctgaatggagcaaaaatgcagacatgcttttcagtatccatcccatggat
ggttctttactagtttggcacgtagattggctggatgaataccagcctggaatgtttcgc
caagtacaggtgtcctttgtttcgagaattcctgtagctttccctacaggtgatgcaaac
tctctctgtaaaagcatagtaatgtatgcttgtaccaagaatgttgacttggctattcag
caagggcgacaaaagccctctggcctcactcgatctacatcaatgcttatctcttctggt
caaaataaatcatctaatagcttaaaattaagtatttttacccctaatgttatgatgatt
tcaaagcatgctgatggctctctgaatcagtggctagtaagttttgctgaggaatctgct
ttttctacagttcttagtatttctcacaaatccagatactgtggtcatcgttttcatctt
aatgacttagcttgccactcagtattgccattattactgacaacatcgcaccataatgca
ttaaggacaccagatgttgataaccaaaagaaacctcatgatagtgtaaatattgaagaa
tgttctctggtacaccaaaataaaagcactgctgatgtggcatttcaggatcccaatgca
gtttatagtgagcttattctttggagggttgatccagttgggccattgtccttttcggga
ggagtgtctgagcttgcccggatcaattctcttcatgtttctgccttttccaatgtggca
tggcttcctactcttatacccagttactgtctcggtgcatactgtgactctcctagtgct
tgctttgtggctagtgatggacagtatctgaggttatatgaagcagtcattgatgccaag
aaacttctgtgtgagctctccaacccagaaatttctaaatatgttggtgaagtgtttaac
attgtcagtcagcagtcaacagccaggccaggatgcattattgcattagatcccattacc
aaacttcatggccgaaaaacccagcttcttcatgtgtttcaagaagacttcattttgaat
aacttggagaagaaaagtctggggaaagatagcattccatctgatacaggcagcttatct
aatggattttctgaaaaattctacctggttgtgatagagtgtactcaggacaaccgttca
ctgttacgcatgtggaatttacatttaaaatcaattcctgtctcgttggatgaaagaata
gatatgaaaatttctgaagtagtttggcaaccagaagaacattattcttcttctccggag
aggatcccaactccatttgcacagaagtttcaggcttgcagagccaatctccagagcacc
agcaagttgtctctgtgttctgaaatggtgtacagccaggagttgcagttgcctgaagga
gttgagatcataagtgtgaagccatcagcaggacatctgagttcttcttctatatatcct
gtatgcagtgccccttacttattggccacttcgtgctcggatgagaaagtaaggttttgg
agatgccgagtaacagatggagaacctgctacctcaaagaatggaaaaatagatcttacg
tacatttgggaagaatggccattgcttattgaagatggacttcagagcaatagtagtata
tctgtaccgggtaggcctgtagaagttagctgtgcacatacaaaccgtttagcagtggca
tataagcatcttgcatctaatagtagatcttctcaggacgttgtgatgcacgtgagtatt
tttgaatgtgagtctactggaggctcatgttgggtccttgaacagacaattcatttagat
gatttaagcacaatgttggattctggcattagcatagatagcaatttagtggcctataat
aagcaagagacctatttattcagtaaagaaagtatcacaacaaacacaaaacatttagtt
cacttggactggatgtctagagaagatggttctcatatcctgactgttggaattggatca
aaactttttatgtatggacctctgtctggcaaggtacaagaacatattggtaaggagagc
ctagcatttcctctgtgggagagtactaaagttgtgcctctttctaaatttgtcctctta
cgaagtgtggacttggtttcttctgtggagggctcccccccttttcctgtttctttgtcg
tgggtccgggatggcatcctggtggtaggaatggattgtgaaatgcatgtatattcccag
tggcagccatcttctaaacaagaacctgccaggacagattcgtacggtgggagcactcct
tctgtactcagcttagtcagacagagcaactcatcaagttctgggctacagcctacaaag
aaaactctgactcgatccatgactagtcttgctcagaaaatctgtgggaagaagactgcc
ctggatccttcagtggatatggaagattcaggactctttgaagcagctcatgtactttcc
ccaaccttgcctcagtaccatcccttgcagcttttggaactcatggaccttggcaaggtt
cggagagcaaaggccatcttgtcacatctggtcaagtgcattgctggggaggttgtggct
ctgagtgaagctgagtccaatcatgatcgccgtctaaggtctctcaccatcagtgctagt
ggaagcactaccagagacccccaggcgttcaacaagactgaaagtacggattacacagaa
atagattctgttcctccacttcctttatatgccttgcttgcagcagatgatgatcgatgt
tactcatctttggagaaatccagtaatgagagttccttcaataaatcaaaccagttgtcc
aaagaaagttatgatgagctttttcagacttccgctctaatgcctgatattcatgtgtta
gaatcaggggaagaaaatacaaagcccagagtcattgacctttcgcagtacaatccgact
tactttggacctgagcatgctcaggttctttctggccacttactgcattccagtctacca
ggactcagccggatggagcagatgtctctgatggccttggctgacacaattgcaacaaca
agcactgatattggagaaagcagagacaaaagccaaggtggagaaacgcttgatgaatgt
gggttaaagtttcttctggctgttcggctccataccttccttacaacttcccttccagcc
tgtcgagcccaactccttcgccaaggcctgtctaccagtcattttgcttgggcatttcac
tcggtagcagaagaagaactgctgaccatgttgcctgcaatgcagaagcatgaccccacc
tggtctgaattaagagccatgggtgtggggtggtgggtccggaataagcgaatcttacgc
acatgcatagaaaaagtagccaaagcagccttttatagaaataatgatcctttagatgct
gccattttttaccttgcaatgaaaaagaaagctgttatctggggattgtacagatctcaa
aaggacactagaatgacacaattttttggacacaattttgaggaagagaggtggcgtaaa
gcagctctgaagaatgcattttctttgctaggcaaacaaagatttgaacattctgcagca
ttttttcttttggctggttgtctgagagatgcagttgaggtatgtcttgagaaactgaat
gacattcagttagctcttgtaatagcaagactatatgagtctgaatttgataaatctaca
acatacaaatcaattttacggaaaaaagttttgggcattgattctcgtgtcagtgaactc
agttcatcggacataagtgtgcattgtgatcctttccttcggagtatggcatactggatt
ttggaagattacagtgatgctctggaaacattaataaagcaaccagtgagagaagatgat
gatcaagtcttggtgtcagcctgtaatcctgcagtttttaatttttataattacctaagg
acacaccctgttttgctgagacgtcattttggatcatctgatacgttttccgcacagctg
ggtttaccaggacagagtggattggcaggaaccattagtttgagtgaaagaaggttattc
tttactactgctagtgctcatctaaaagctggctgtcctatgttggccttggaagtatta
tcaaagatgcccagagtcatcaagaaaataaaacctttttgtagagcatctggttttctg
gatagtagtaaagattcttctccagtgaaactggatgcaaaagaagataaatcttctgca
attaactggtcccagtcactgacaaatggttttgactcttcttcagagggctcttcggag
aagcaatccaactccactctttcttttgattggagccagccaagtgttgtatttcaggat
gattctttagagttaaaatgggacagtgataatgatgaagaaaatgaggatctccctatt
tgcatgaaagaactgaaaccattacagagaaaagtagatgcaaaattagatgaagtaagc
agttatacagactcttttagcaccctagatgaaaatgacattttaaatccatctgaagat
ataattgctgttcagttaaaatttagagcatgtttaaagattctcacagtagaacttcgt
actttatctactggctatgaaatagatggtggaaaattacgttaccaattataccactgg
cttgagaaagaggtggtagctcttcagaggacatgtgacttttgctcagatgtggaagag
ctgcccaccgcagatggcagaaatagagatgaatttggattcagcaaggacgctgatggt
ctgcaccaccaaacaaaagcgaaacaactgagagagagttttcaggaaaagagacagtgg
ctcttgaaatatcagtcactcctgagaatgtttcttagttactgtatacttcacggctcc
catggtgggggtcttgcatctgtaagaatggaattgattttgcttttacaagaatgtcag
caggaaacatcagacccactgtttcctagccctctgtcagagcaaacctcagtgcctctc
ctctttgcttgtacagccagtgccaaaacagtagttgccaatccattattgcaccttagt
aatctgacacacgatattctacatgccattataaacttggattcaccacctcatccggat
agccaaagcaataaagtatatgtaatgcatactttagcagcctcactttctgcttgtatt
tatcagtgcctttgtggtagtcataactacagttcatttcagacaaatcagtttactgga
atggtctatcaaacagtactgcttccccatcgacattctttgagaacaggaagcttagaa
gaagcagtcactcccaacacagcaccagctcaatggccaggaataacttgtctaattcgc
cttttgacctcttctggtgaggaagcccagtcaggacttacgatcttgctctgtgaaatt
ctcacggcagtctaccttagtctcttcatccatggcctggccacacattccagcaatgaa
ctctttcggattgtggcccatcctctaaatgaaaaaatgtggtctgcagtatttggtggc
ggggcccgtgtgtccagcaaagaacagactcatgcaaaagctttacatgtgtcctccctg
gtggaagaaggagaaaaacaaaacaaacattttaggccatccaaaacaccttgccaagaa
tctgctcttctgacctcatcctcaccacccatagacccagagtcaccggccgttaaagag
aagttcatccccccagagctcagtatctgggactatttcatagccaagccttttctaccc
ccttcccaaagtagaccagaatatgactcagaggagagtctggaaagtgatgatgatgat
aacgaagatgatgtgttagcttcagattttcaccttcaagagcattctaactcaaattca
tatagttggtctttgatgcggttggctatggtacaattggtgctcaacaatttgaagact
ttctatccctctgcaggtcatgatcttgcagagcttccagtcagttcacctctttgtcac
gcagttctgaaaactcttcagtgttgggaacaggttcttctccgacgtcttgaaattcat
ggtggaccacctcaaaactatatctcgagtcatacgtctgaagagagtttgtctgcaggc
cctgcaattctccgccataaagctttactggaacctacaaatactcctttcaaatccaaa
catcatctagcactgtctgtgaaaaggctttggcagtatttggtgaagcaggaagaagtt
caagaaacgtttatcagaaatatattcacaaagaaacgatgtctgaatgagtcattagag
gacaacagtgaaaccatcaaaaattctatgatggaggagccaaacatcaataagatagaa
gcagacttgggatatcctggaggtaaagcaagaattatccataaggaatctgatatcatt
actgcctttgctgttaataaagcaaatagaaattgcatagctatcgcctctagccatgat
gttcaagaactggatgtttctggaattctggctacacagatatatacttgggtagatgat
gatgtagaaatggaacccaaagggtcagaagatttcttggtcatccatgctcatgatgac
ttaacagctgttcaaggtacaactccatatacacatagcaatcctggcaccccaatcaac
atgccatggcttggtagtacccagactggcagaggagcatcggtggtatgtaagatgatt
aagaaacccattaataatgtcagaagaatgacttctcacccaactcttccttactacctg
acaggagctcaggatggcagtgtcagaatgtttgaatggggacattctcagcagataact
tgctttcggtctggtggcaattcaagaattacaagaatgagattcaactaccaaggaaac
aagtttggaatagtggatgctgatggatatttaagtttgtatcaaacaaactggaaatgt
tgtccggttactgggagcatgcctaagccatacctgacctggcagtgtcataacaagacg
gccaatgactttgtcttcgttagctcttcctctctgatagctacagctggcctctccacc
gacaacagaaacatatgtttgtgggatactcttgtagcacctgccaatagcttagttcat
gcttttacctgccatgatagtggagccactgttttagcatatgctcccaaacatcaacta
ctgatatccggtggcagaaaaggcttcacgtgtgtatttgaccttcgacaacgccagcaa
cggcaactctttcagagtcatgattctcctgttaaagctattgctattgatccaactgaa
gagtactttgttacagggtcggcagaaggcaatataaagatctggagtctttctaccttt
ggtcttctccacacttttatcagtgaacatgctcggcagtccatttttaggaatattggg
actggtgtgatgcagattgagacgggaccagcaaatcacattttctcttgtggagctgat
gggacaatgaagatgaggatactgccagaccagtttagtccctttaatgaggtgttaaaa
aatgatgcaaaacttgtgctgtag
DBGET
integrated database retrieval system
