Dipodomys merriami (Merriam's kangaroo rat): 138833829
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Entry
138833829 CDS
T11079
Symbol
Cpsf7
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 7 isoform X1
KO
K14398
cleavage and polyadenylation specificity factor subunit 6/7
Organism
dmer Dipodomys merriami (Merriam's kangaroo rat)
Pathway
dmer03015
mRNA surveillance pathway
dmer03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
dmer00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
138833829 (Cpsf7)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
138833829 (Cpsf7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dmer03019
]
138833829 (Cpsf7)
Messenger RNA biogenesis [BR:
dmer03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
138833829 (Cpsf7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RSLD_CPSF6
RRM_1
Motif
Other DBs
NCBI-GeneID:
138833829
NCBI-ProteinID:
XP_069888283
LinkDB
All DBs
Position
Unknown
AA seq
471 aa
AA seq
DB search
MSEGVDLIDIYADEEFNQDSEFNNTDQIDLYDDVLTATSQPSDDRSSSAEPPPPVRQEPS
PKPNNKAPAILYTYSGLRNRRAAVYVGSFSWWTTDQQLIQVIRSIGVYDVVELKFAENRA
NGQSKGYAEVVVASENSVHKLLELLPGKVLNGEKVDVRPATRQNLSQFEAQARKRECVRV
PRGGIPPRAHSRDSSDSADGRATPSENLVPSSARVDKPPSVLPYFNRPPSALPLMGLPPP
PIPPPPPLSSSFGVPPPPPGIHYQHLMPPPPRLPPHLAVPPPGAVPPALHLNPAFFPPPN
ATVGPPPDTYMKASTPYNHHGSRDSGPPPSTVSEAEFEEIMKRNRAISSSAISKAVSGAS
AGDYSDAIETLLTAIAVIKQSRVSNDERCRVLISSLKDCLHGIEAKSYSVGASGSSSRKR
HRSRERSPSRSRESSRRHRDLLHNDDRHDDYFQERNREHERHRDRERDRHH
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaaggagtggacttgattgatatatacgctgacgaggagttcaaccaggactca
gagttcaacaatacagatcagattgacctatatgatgatgtgctgacagccacctcccag
ccgtcagatgacagaagcagcagtgctgagccaccacctcctgttcgccaggagccatct
cccaagcccaacaacaaggcgcctgcaattctgtatacctacagtggtctgaggaataga
cgagcagctgtctatgtaggcagcttctcttggtggaccacagaccagcagctgatccag
gttattcgctctataggagtctatgatgtggtggagttgaaatttgcagagaatcgagca
aatggccaatccaaagggtatgctgaggtggtggtagcctctgaaaactctgtccacaag
ttattggaactcctgccaggaaaagttcttaatggagaaaaagtagatgtgaggccggcc
acccggcagaacctatcacagtttgaggcacaggcccggaaacgtgagtgcgtccgagtc
ccaagagggggcatacctccacgagcccactcccgagattctagtgattctgccgatgga
cgagccacaccctctgagaacctcgtgccctcatccgctcgtgtggataagccccccagc
gtgcttccttacttcaatcgccctccttcagcccttcccctgatgggtctgcctccaccc
ccaattccacccccaccacctctctcctcaagttttggggttcctcctcctcctcctggc
atccactaccagcatctcatgccccctcctcctcgattacctcctcatcttgccgtacct
ccccctggggccgtcccacctgccctgcacctcaatccagccttcttccccccgccaaat
gctacagtggggcctccaccagatacttacatgaaggcctctacaccctataaccaccat
ggcagccgagattcgggccccccgccctccacagtgagtgaagctgaatttgaagagatc
atgaaacgaaacagagcaatttctagcagtgccatttccaaagccgtatctggagcgagt
gcaggggattacagtgacgcaatcgagacactgctcacagccattgcagttattaaacag
tcccgggtctccaatgatgagcgttgccgagtcctcatctcctccttaaaggactgtctt
catggcatcgaggccaagtcctacagtgtgggtgccagtgggagctcttccaggaaaaga
catcggtccagagagaggtcacccagccggtcccgggagagcagcagaagacaccgggat
ctgcttcataatgatgatcggcatgatgattatttccaagaaaggaaccgggagcatgaa
agacaccgggatagagagcgggaccgccaccactga
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