Dipodomys merriami (Merriam's kangaroo rat): 138834795
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Entry
138834795 CDS
T11079
Symbol
Pms2
Name
(RefSeq) mismatch repair endonuclease PMS2 isoform X1
KO
K10858
DNA mismatch repair protein PMS2
Organism
dmer Dipodomys merriami (Merriam's kangaroo rat)
Pathway
dmer03430
Mismatch repair
dmer03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
dmer00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
138834795 (Pms2)
03460 Fanconi anemia pathway
138834795 (Pms2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dmer03400
]
138834795 (Pms2)
DNA repair and recombination proteins [BR:
dmer03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
138834795 (Pms2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutL_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
138834795
NCBI-ProteinID:
XP_069889613
LinkDB
All DBs
Position
Unknown
AA seq
917 aa
AA seq
DB search
MTTHARPLILPISEKEAWEPFAVPPGRGRRAMSKPANQLSGEPALVEAAAGRTPVVSRSR
SESMELAAGSSTELAKAIKPIDGKSVHQICSGQVVLSLSTAVKELVENSVDAGATSIDLR
LKDYGADLIEVSDNGCGVEEENFEGLALKHHTSKIQEFADLTQVETFGFRGEALSSLCAL
SDVTISTCHTSSKVGTRLVFDHNGKIIQKNPYPRPKGTTVTLQHLFYTLPVRHKEFQRNI
KKEYAKMVQVLQAYCIISAGIRVSCTNQLGQGKRQPVVCNSGGSSVKENIGSVFGQKQLQ
SLIPFIQLPPSDSVCEEYGLSCSEALHNLFYISGFISRCTHGVGRSATDRQFFFINHRPC
DPAKVSRLVNEVYHMYNRHQYPFVVLNISVDSECVDINVTPDKRQILLQEEKLLLAVLKT
SLIGMFDSDVNKLSVNQQALLSVEGNLIRMRGTEVETPLPDSPPSSSTQEEDKRSVSISR
LREAFSLRHPAETKSPGPRTPELRWNPPVQKKRVPSSASNPASGRSLQGPLEEVVTPKDS
DGRGDRVEVGKDSEYTSTSAAPEEGFSPREVGSSSSDHAESSPEDRFSQGDKDSGENLPE
LDHPPSAGESGKEKDGPCQLLPPQTHLSSSSAKRFKKEIPSKTNTPPKSATTENASAAEV
DVAVTISKKIVLLAFSMSSLATRIKQLNCQRQQREGKPNYRKFRARICPGENEAAEDELR
KEISKSMFADMEVLGQFNLGFIITKLKEDIFLVDQHAADEKYNFEMLQRHTVLQAQRLIA
PQALNLTAVNEAILIENLEIFRKNGFDFVIDEDAPVTERAKLISLPTSKNWTFGPQDIDE
LIFMLSESPGVMCRPSRVRQMFASRACRKSVMIGTALNTSEMKKVIAHMGEMDHPWNCPH
GRPTMRHIANLDVISQN
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atgacgacacatgctcgacctttaatattaccaatcagcgagaaggaagcctgggaacca
tttgctgtcccgcccggaagggggcggagagctatgtcaaaaccagccaatcagctctca
ggagagccagcccttgtggaagcggcggccggaagaactcccgtggtctcccggagtcgc
tcggagtccatggagcttgccgcgggatcgagtacagagctcgcgaaggccatcaaacct
atcgatgggaagtcagttcatcagatttgttctgggcaagtggtcctgagtttaagcact
gctgtaaaggagttggttgaaaatagtgtggatgctggtgccactagtattgatctcagg
cttaaagattatggggcggatctcattgaagtttcagacaacggatgtggggtagaggaa
gaaaactttgaaggcttagctctgaaacatcatacttctaagattcaagagtttgctgac
ctcacccaggttgaaacttttggctttcggggagaagctttgagctcactctgtgcactg
agtgatgtaactatttctacctgccacacatcttcaaaagtggggacccgactggtgttt
gatcacaatgggaaaattatccagaaaaacccctacccacggcccaaggggaccacagtc
actctgcagcatttgttctatacgctccctgtgcgccataaggaattccaaaggaatatt
aaaaaggagtatgccaaaatggtccaggtgttacaggcatactgtatcatttcagcaggt
atccgagtaagttgtaccaatcagcttggacaaggaaaacggcagcctgtggtttgcaat
agtggaggctccagtgtcaaagagaatattggctctgtgttcgggcagaagcagctacaa
agcctcattcctttcattcagctgccccctagtgactctgtctgtgaagagtatggcctt
agctgttccgaggcgctgcataatctgttttacatctccggcttcatctcacgctgcaca
cacggcgttgggaggagtgccactgaccggcaattctttttcatcaatcatcggccttgt
gacccggcaaaggtgtccagacttgtgaatgaggtctaccacatgtataatcgtcatcag
tatccattcgttgttcttaacatttcagttgattcagagtgtgtggatatcaatgtaact
ccagataagaggcaaattttgctgcaagaggagaagcttttactggctgtgttaaagact
tcgctcataggaatgttcgatagtgatgtgaacaaactcagtgtcaaccaacaggcactg
ctgagtgttgaaggtaacttgataaggatgcgtgggacggaagtggaaacacctctgcca
gacagtcctccttcgtctagcactcaggaagaagacaaaaggtctgtgtccatttccagg
ctgagagaggccttttctcttcgtcatcctgcagagaccaaatctccaggcccaaggact
cctgaactgagatggaatcctccagtacagaaaaagagggtaccctctagtgcctccaat
cctgcctctggcagaagcctgcagggccctctggaagaggtggtgactcccaaggactcg
gatggccgtggggacagagtggaagtggggaaggactcggagtacaccagtacatcagct
gccccagaggaagggttcagcccccgggaagtgggcagtagcagtagtgaccatgcagag
agctccccagaagacagattttcacaaggagacaaggactctggtgagaatctacctgaa
ctggaccatcccccttcagctggggagtcagggaaggaaaaagatggcccctgtcaactt
ctgcctcctcagacacatctctcctcctccagtgctaagcgatttaaaaaagaaattccc
tcaaagaccaacactcccccaaagtcagctaccactgagaatgcctcagcagccgaagtg
gatgtggctgtgacaattagtaagaaaatagtgctcctcgccttttctatgagctcttta
gctacacgaataaagcagttgaattgccaaagacaacaaagggaaggcaaaccgaattac
aggaaattcagggcaaggatctgtccaggagaaaacgaagcagcagaagatgaactaaga
aaagagataagtaaatcaatgtttgcagatatggaggtgcttggtcagtttaacttgggg
ttcataataaccaagctgaaagaggacatcttcctggtggaccagcatgcagctgatgag
aagtacaacttcgagatgctgcagcgtcacacagtactccaagcacagaggctcattgca
cctcaggctctcaacttaactgctgtcaatgaagctatcctgatagaaaatctggaaata
ttcagaaagaatggctttgactttgtcattgatgaagatgctccagtcactgaaagagct
aaactgatttccttgccaactagtaagaactggacttttggaccccaagatatagatgag
ctcatcttcatgctgagtgagagcccaggggtcatgtgccggccctcccgagtcaggcag
atgtttgcctcgagagcctgtcggaaatctgtgatgattggaacagctcttaacaccagc
gagatgaagaaggtcatcgcccacatgggcgagatggaccacccctggaactgcccccac
ggaaggccgaccatgaggcacattgccaatctggatgtcatttctcaaaactga
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