Dipodomys merriami (Merriam's kangaroo rat): 138835306
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Entry
138835306 CDS
T11079
Name
(RefSeq) 28S rRNA (cytosine(4447)-C(5))-methyltransferase-like
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
dmer Dipodomys merriami (Merriam's kangaroo rat)
Brite
KEGG Orthology (KO) [BR:
dmer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dmer03009
]
138835306
Enzymes [BR:
dmer01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
138835306
Ribosome biogenesis [BR:
dmer03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
138835306
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
Methyltr_RsmF_N
Methyltransf_31
PCMT
Methyltransf_25
FtsJ
FTA4
Methyltransf_15
Motif
Other DBs
NCBI-GeneID:
138835306
NCBI-ProteinID:
XP_069889971
LinkDB
All DBs
Position
Unknown
AA seq
758 aa
AA seq
DB search
MGRKLDPTKEKRGPGRKARKQKGAETELLRFLPAADDESSKRLSSRARKRAAKRRLESVE
IPKTNRSPGAKALPGQLPKGAVGLSGQKGAQALLSTARGRKRPAPAHSSEEEEEEDEEEE
EAEVKQDGLWGSEDSDADMVDDYGADSHSEGEDEKLLPIERAARRQKALEAAVGGQGSEE
DSEEEEAPSPEPREPGEAEGDLQINVDQDEPFVLPPAGDTEQDAQAPDLQRVHKRIQDLV
GVLRDFGAQREEGRSRAEYLSRLQKDLATYYSYGDFLLRKLVELFPLAELIEFLEANEVP
RPITLRTNTLKTRRRDLAQALINRGVNLDPLGKWSKTGLVVYDSSVPIGATPEYLAGHYM
LQGASSLLPVMALAPQEHERVLDMCCAPGGKTSYMAQLMKNTGVILANDASAERLKSVVG
NLHRLGVTNAIVSHYDGRQFPKVVGGFDRVLLDAPCSGTGVISKDPAVKTNKDEKDILRC
AHLQKELLLSAIDSVNAASKTGGYLVYCTCSIMVEENEWVVDYALKKRNVRLVPTGLDFG
QEGFTRFRERRFHPSLRAARRFYPHAHNMDGFFIAKLKKFSNAVPQAPAPAPAGTRAADP
PAEPDRPAPQSRSPPAREARAAAKAQRAPRPKKLNGVPGGAGAGPPPAAPGLQDCSPPAG
RARSGPGPGVTGRPRPPAAKKHGSPADARPPGPGSRAPPRPRGRHRPPGKARAAGNEQHR
TNGVPKARPRPAAPSPSSSRPPPAKRRKPGPGGPRERP
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atggggcgcaagttggaccccacgaaggagaagcgcgggcccggccgcaaggcccggaag
cagaagggcgccgagaccgagctgctgcgcttcctgccggcagctgatgatgaaagttcc
aagagactgtccagtcgggctcggaagagggcagccaagaggaggctggaatctgtggag
atccctaagacaaacaggtctcctggggccaaagccttacctggacagctaccaaaagga
gctgtcgggctctccggtcagaagggagcccaggccttgttgagcactgctcggggcagg
aagcgtccggcacctgcacacagcagcgaggaggaggaagaggaggacgaggaggaggag
gaggctgaggtgaagcaggatggcctgtggggctcggaagacagcgatgctgacatggtg
gatgactacggcgccgactcgcactccgagggcgaggatgagaagttgttgcccattgag
cgagcagcccggaggcagaaggcgctggaggccgcggtgggaggccaggggagcgaggag
gactctgaggaagaggaggcgccgtcccccgagccccgcgaacccggagaggccgagggg
gacctgcagatcaacgtggaccaggacgagcccttcgtgctgccccctgctggcgacacg
gagcaggatgcccaggcccccgacctgcagcgcgtgcacaagcggatccaggacctcgtg
ggggtgctgcgtgatttcggggcgcagcgggaagaaggccgctcccgcgccgagtatctg
agccgcctgcagaaggacctggccacctactactcctacggggacttcctgctgcgcaag
ctcgtggagctcttccccctggccgagctgatcgagttcctagaagccaatgaggtgcct
cggcccatcaccctccgtaccaacaccctgaagacccggcgccgagacctggcacaggct
ctcatcaatcgcggcgtcaacctggaccccctgggcaagtggtccaagaccggcctggtg
gtgtacgactcctcggtgcccattggcgccacccccgagtacctggccgggcactacatg
ctgcagggcgcctccagcctgctccccgtcatggcgctggcgccccaggagcacgagcgg
gtcctcgacatgtgctgcgcccccgggggcaagaccagctacatggcccagctgatgaag
aacacgggcgtcatcctcgccaacgacgccagcgccgagcgcctcaagagcgtggtgggg
aacctgcaccgcctgggggtcaccaacgccatcgtgagccactacgacgggcgccagttc
cccaaggtggtggggggcttcgaccgcgtgctgctggacgcgccctgcagcggcacgggc
gtcatctccaaggaccccgccgtgaagaccaacaaggacgagaaggacatcctgcgctgc
gcgcacctgcagaaggagctgctcctgagcgccatcgactccgtcaacgccgcctccaag
acgggcggctacctggtctactgcacctgctccatcatggtggaggagaacgagtgggtg
gtggactacgccctgaagaagcggaacgtgcgtctggtgcccaccggcctggacttcggc
caggagggcttcacgcgcttccgcgagcgccgcttccacccgagcctgcgcgccgcccgc
cgcttctacccgcatgcgcacaacatggacggcttcttcatcgccaagctcaagaagttc
tccaacgccgtcccccaggccccggccccggcccccgcagggactcgtgcggccgacccc
cctgcggagccggaccgccccgcgccccagagccgcagcccgcccgccagggaggccagg
gcggccgcgaaggcccagcgggcgccgcgccccaagaagctcaacggcgtccccggcggg
gcgggcgccgggccgccccccgcggcccccggcctgcaggactgcagcccgcccgctggc
cgggcccgatccggcccggggcccggggtgaccgggaggccgcggccgccggccgccaag
aaacacgggtcccccgcggacgcccggccgccgggccccggatcccgggccccccccagg
ccccggggccgccaccgccccccgggcaaggcccgagcggccgggaacgagcagcaccgg
acgaacggcgtccccaaagcccggccgcgtcccgccgcgccctcgcccagttccagccgg
cctccgcccgccaagaggaggaagccggggcccggcggcccgcgcgagcggccgtga
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