Dipodomys merriami (Merriam's kangaroo rat): 138835819
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Entry
138835819 CDS
T11079
Symbol
Cop1
Name
(RefSeq) E3 ubiquitin-protein ligase COP1 isoform X1
KO
K10143
E3 ubiquitin-protein ligase RFWD2 [EC:
2.3.2.27
]
Organism
dmer Dipodomys merriami (Merriam's kangaroo rat)
Pathway
dmer04115
p53 signaling pathway
dmer04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
dmer00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
138835819 (Cop1)
09140 Cellular Processes
09143 Cell growth and death
04115 p53 signaling pathway
138835819 (Cop1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dmer04121
]
138835819 (Cop1)
Enzymes [BR:
dmer01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
138835819 (Cop1)
Ubiquitin system [BR:
dmer04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
138835819 (Cop1)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
138835819 (Cop1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
zf-C3HC4_2
Beta-prop_EIPR1
WDR55
Beta-prop_RIG_2nd
EIF3I
Beta-prop_WDR19_1st
Beta-prop_TEP1_C
zf-C3HC4
zf-RING_2
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
zf-RING_UBOX
Beta-prop_EML
zf-C3HC4_3
Beta-prop_DCAF4
zf-RING_5
zf-C3HC4_4
Beta-prop_WDR90_POC16_2nd
RING_XB3-XBAT31
WD40_RFWD3
Beta-prop_WDR35_TULP_N
Beta-prop_Vps41
WD40_like
Beta-prop_IFT140_1st
Beta-prop_DCAF12
Beta-prop_IFT122_1st
zf-rbx1
zf-RING_10
zf_C2H2_10
zf-RING_11
Sina_RING
EAD4
zf-Nse
Motif
Other DBs
NCBI-GeneID:
138835819
NCBI-ProteinID:
XP_069890513
LinkDB
All DBs
Position
Unknown
AA seq
739 aa
AA seq
DB search
MSGSRPTGSGSAGTSPGSSAASSVTSASSSLSSSPSPPSVAASAAALVSGGGAQAAGSGG
LGGPGRPVLVAAAVSGSGGGSGGGAVSAGLSRLSCGARPGAGVGGSGSGLGGGGGGSGRK
RPPLAPLCNGLINSYEDKSNDFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPK
CNYVVDNIDHLYPNFLVNELILKQKQRFEEKRFKLDHSVSSTNGHRWQIFQDLLGTDQDN
LDLANVNLMLELLVQKKKQLEAESHAAQLQILMEFLKVARRNKKEQLEQIQKELSVLEED
IKRVEEMSGLYSPVSEDSTVPQFEAPSPSHSSIIDSTEYSQPPGFSGSSQTKKQPWYNST
LASRRKRLTAHFEDLEQCYFSTRMSRISDDSRTASQLDEFQECLSKFTRYNSVRPLATLS
YASDLYNGSSIVSSIEFDRDCDYFAIAGVTKKIKVYEYGTVIQDAVDIHYPENEMTCNSK
ISCISWSSYHKNLLASSDYEGTVILWDGFTGQRSKVYQEHEKRCWSVDFNLMDPKLLASG
SDDAKVKLWSTNLDNSVASIEAKANVCCVKFSPSSRYHLAFGCADHCVHYYDLRNTKQPI
MVFKGHRKAVSYAKFVSGEEIVSASTDSQLKLWNVGKPYCLRSFKGHINEKNFVGLASNG
DYIACGSENNSLYLYYKGLSKTLLTFKFDTVKSVLDKDRKEDDTNEFVSAVCWRALPDGE
SNVLIAANSQGTIKVLELV
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgtccggtagtcgaccgaccgggtcgggctccgccgggacgagccccggctcctcggcg
gcctcctcggtgacttccgcctcctcgtccttatcctcgtccccgtcgcccccttccgtg
gcggcctcggcggcggcgctggtgtccggcggaggcgcccaggccgcgggctcgggcggc
ctcgggggtccggggcggcctgtgctggtggcggccgccgtgtcgggcagcggcggcggc
agcggcggcggggcggtgtccgcgggcctgtcgcggctcagctgcggggccaggcccggc
gccggcgtaggaggcagcggctccggcctcggcggcggcggcggcggcagcggccggaag
cgacctccgctcgccccgctctgcaatgggctcatcaactcctacgaggacaaaagcaac
gacttcgtctgccccatctgctttgatatgattgaggaagcatacatgacaaaatgtggc
cacagcttttgctacaagtgtattcatcaaagtttggaggacaataatagatgtcccaag
tgtaactatgttgtggacaatattgaccatctctatcctaatttcttggtgaatgagctc
attctcaaacaaaagcaaagatttgaggaaaagaggttcaaattggaccactcagtgagt
agcaccaatggtcacaggtggcagatatttcaagatttgttaggaactgaccaagataac
cttgatttggctaatgtcaaccttatgttggagttacttgtgcaaaagaagaaacaactg
gaagcagaatcacatgcagcccaactacagatccttatggaattcctcaaggttgcgaga
agaaataagaaagagcaactggaacagatccagaaggaactaagtgttttggaagaagat
attaaaagagtggaagaaatgagtggcttatactctcctgtcagtgaagatagcacagtg
cctcaatttgaagccccttctccatcacacagtagtataattgattctacagaatacagc
caacctccaggtttcagtggcagttctcagacaaagaaacagccttggtataacagcaca
ttagcctcaagacgaaaacggctcactgctcattttgaagacttagagcagtgttatttt
tctacaaggatgtctcgtatatcagatgacagtcgaactgcaagccagttggatgaattt
caggaatgcctgtctaagtttacaagatataattcagtacgacctttggccacattgtca
tatgctagtgatctctataatggttccagcatagtttctagtattgaatttgatcgggat
tgtgactattttgcaattgctggggttacaaaaaagattaaagtctatgagtacggcaca
gtcatccaggatgcagtggatattcattaccctgagaatgaaatgacctgcaattccaaa
atcagctgtatcagttggagcagttatcataaaaacctgttagccagcagtgattatgaa
ggtactgttatcctatgggatggattcacaggacagagatcaaaagtgtatcaggaacat
gagaagaggtgttggagtgttgactttaatttgatggatcctaaacttttggcttcaggt
tctgatgatgcaaaagtgaagctatggtctaccaacctagacaattcagtggcaagcatt
gaagcaaaggctaatgtgtgctgtgtgaaattcagtccctcctccagatatcatctggct
tttggttgtgcagatcactgtgtccactactatgatcttcgtaacactaaacagccaatc
atggtattcaagggacaccgaaaagcagtctcttatgcaaagtttgtgagtggcgaggaa
attgtctctgcctcaacagacagccagctaaaactgtggaatgtagggaaaccatactgt
ctacgttccttcaagggacatatcaatgaaaaaaattttgtaggccttgcttccaatgga
gattatatagcttgtggaagtgagaacaactctctctatctgtactataaaggactttct
aagactttgctaacttttaagtttgatacagttaaaagtgttctggataaagacagaaaa
gaagatgatacaaatgaatttgttagtgctgtgtgctggagggcactaccagatggggag
tccaatgtgctgattgctgctaacagtcagggtacaattaaggtgctagaattggtatga
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integrated database retrieval system
