Dipodomys merriami (Merriam's kangaroo rat): 138835821
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Entry
138835821 CDS
T11079
Symbol
Tnr
Name
(RefSeq) tenascin-R isoform X1
KO
K06252
tenascin
Organism
dmer Dipodomys merriami (Merriam's kangaroo rat)
Pathway
dmer04151
PI3K-Akt signaling pathway
dmer04510
Focal adhesion
dmer04512
ECM-receptor interaction
dmer04518
Integrin signaling
dmer05165
Human papillomavirus infection
dmer05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
dmer00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
138835821 (Tnr)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
138835821 (Tnr)
04518 Integrin signaling
138835821 (Tnr)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
138835821 (Tnr)
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
138835821 (Tnr)
09172 Infectious disease: viral
05165 Human papillomavirus infection
138835821 (Tnr)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
dmer00536
]
138835821 (Tnr)
Glycosaminoglycan binding proteins [BR:
dmer00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
138835821 (Tnr)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
Fibrinogen_C
EGF_TEN
EGF_Tenascin
EGF_Teneurin
FN3_DSCAM-DSCAML_C
Fn3_Dep-1_3rd
EGF_2
Pur_ac_phosph_N
Fn3_VIN3
FN3_Tor_3rd
DUF7949
CBM_4_9
Motif
Other DBs
NCBI-GeneID:
138835821
NCBI-ProteinID:
XP_069890515
LinkDB
All DBs
Position
Unknown
AA seq
1358 aa
AA seq
DB search
MGADGETVVLKNMLIGVNLILLGSMLKPSECQLEVTTERVQRQRVEEEGGVSNYNTTSKE
QPMVFNHVYNINVPLESLCSSGLEASAEQEVSAEDETLAEYTGQTSDHESQVTFTHKINL
PKKACPCASSVQVLQELLSRIEMLEREVSLLRDQCNTNCCPESAATGQLDYIPHCSGHGN
FSLESCGCICDEGWVGKNCSEPYCPLGCSSRGVCVDGQCICDSEYSGDDCSELRCPTDCS
SRGLCVDGECVCEEPYTGEDCRELRCPGDCSGKGRCANGTCLCQEGYAGHDCGQRRCLNA
CSGRGHCQEGLCLCEEGYEGPDCSAVAPPEDLRVAGISDRSIELEWDGPMAVTEYVISYQ
PTARGGLQLQQRVPGDWSGVTITELEPGLTYNISVYAVISNILSLPITAKVATHLSTPQG
LQFKAITETTVEVQWEPFSFSFDGWEISFIPKNNEGGVIAQLPSDVTSFNQTGLKPGEEY
IVNVVALKEQARSPPTSASVSTVIDGPTQILVRDVSDTVAFVEWTPPRARVDFILLKYGL
VGGEGGKTTFRLQPPLSQYSVQALRPGSRYEVSVSAVRGTNESDAATTHFSTEIDAPKNL
RVSSRTATSLELEWDNSEAEVQEYKVVYSTLAGEQYHEVLVPIGLGPTTRTTLTDLVPGT
EYGVGISAIMNSQQSVPATMNARTELDNPRDLMVTASSETSISLIWTKASGPIDHYRITF
TPSSGIASEVTVPKDRTSYTLTDLEPGAEYIISITAERGRQQSLESTVDAFTGFRPISHL
HFSHVTSSSVNITWSDPSPPADRLILNYSPRDEEEEMMEVSLDATKRHTVLMGLQPATEY
IVNLVAVHGTVTSEPIVGSITTGIDPPKDITISNVTKDSLTVSWSPPAASFDYYRVSYRP
TQVGRLDSSVVPNTVSEFTITRLYPATEYEISLNSVRGREESERICTLVHTAMDNPVGLT
ATNITPTEALLQWKAPVGDVENYVIVLTHFAVAGETILVDGVSEEFQLVNLLPRTNYTVT
MYAASGPLTSGTISTNFSTLLDPPTNLTASDITRQSALISWHPPRAEIENYILTYKSTDG
SRKELIVDAEDTWIRLEGLSENTDYTVLLQAAQDTTRSSLTSTAFTTGGRVFSHPQDCAQ
HLMNGDTLSGVYTIFLNGERSQKLQVYCDMTTDGGGWIVFQRRQNGQTDFFRKWADYRAG
FGNLEDEFWLGLDNIHRITSQGRYELRVDMRDGQEAVFAHYDKFSVEDSRNLYKLRIGGY
NGTAGDSLSYHQGRPFSTEDRDNDVAVTNCAMSYKGAWWYKNCHRTNLNGKYGESRHSQG
INWYHWKGHEFSIPFVEMKMRPYNHRVSAGRKRRALQF
NT seq
4077 nt
NT seq
+upstream
nt +downstream
nt
atgggagcagacggggaaacggtggtcctgaagaacatgctcattggtgtcaacctgatc
cttctgggctccatgcttaagccctcagagtgtcagctggaggtgaccacagaaagggtc
cagagacagagagtagaggaagaaggaggcgtttccaattacaacaccaccagcaaagag
cagcccatggtcttcaaccatgtgtacaatattaacgtgcccctggagagcctctgctcc
tcggggctggaggcatccgctgagcaggaggtgagtgccgaagacgagactctggcagag
tacacaggccagacctcagaccacgagagccaggtcaccttcacccacaagatcaacctc
cccaaaaaggcctgcccgtgtgccagctcagtccaggtgctacaggagctgctgagccgg
atcgagatgctggagagggaggtgtcactgctgcgggaccagtgtaacaccaactgctgc
ccggagagtgctgccacaggacaactggactatattcctcactgcagtggtcatggcaac
tttagcttggagtcctgtggctgcatctgcgatgaaggctgggttggcaagaattgctca
gagccctactgcccgctgggctgctccagtcggggggtgtgtgttgatggccagtgcatc
tgtgacagtgaatacagtggtgacgactgctcggagctccggtgtcccacggactgcagt
tcccgggggctctgcgtggacggggagtgtgtttgtgaagagccctacaccggcgaggac
tgcagggagctcaggtgccccggagactgttcgggaaaggggagatgtgctaatggcacc
tgcctgtgccaggagggctatgctggccatgactgtgggcagcggcggtgtctgaatgcc
tgcagcgggcgaggacactgccaggaggggctctgtctctgtgaggagggctatgaaggt
cctgactgctctgcagttgcccctccagaggacttgcgagtggctggtatcagcgacagg
tccattgagctggaatgggacgggccgatggcagtgacggaatatgtgatctcttaccag
ccgacggcccgggggggcctccagctccagcagcgggtgcctggagattggagtggtgtc
accatcacagagctggagccaggtctcacctacaacatcagcgtctacgctgtcattagc
aacatcctcagccttcccatcactgccaaggtggccacccatctctccacgccccaaggg
ctacagttcaaggccatcacagaaaccaccgtggaagtgcagtgggagcccttctcattc
tccttcgatgggtgggagatcagcttcattccaaagaacaatgaaggaggggtgattgct
cagctccccagcgatgttacctcctttaaccagacaggattgaagccaggggaggagtac
attgtcaatgtagtggcactgaaggaacaagcccggagccccccgacctcggccagcgtc
tccactgtcattgatgggcccacgcagatcctggtccgagatgtctccgacactgtggcc
tttgtggagtggaccccacctcgagccagagtcgatttcattctcttgaaatatggcttg
gtgggcggggaaggcgggaagaccacattccggctccagcctcccctgagccagtactcg
gtgcaggccctgcggcccggctcccgctacgaggtgtcggtcagcgccgtgcgagggacc
aacgagagcgatgctgccaccacccacttctccacagagattgatgcccccaagaacttg
agagtcagttcccgaacagcaaccagccttgaacttgagtgggataacagcgaggccgag
gttcaggagtacaaggttgtgtacagcaccttggcgggcgagcaataccatgaggtgctg
gttcctataggcctgggtcctaccaccaggaccactctcacagatctggtacctggcact
gagtatggagttggaatatctgctatcatgaactcacaacaaagtgttccagccaccatg
aatgccaggactgaacttgacaatccaagagatctcatggtaacagcctcctcagagaca
tccatctccctcatctggaccaaggccagcggcccaatcgaccactaccgaattaccttt
actccatcctctgggatcgcctctgaagtcactgtgccaaaggacaggacttcatacaca
ctgacagacctagagccgggagcagagtacatcatttctatcaccgccgagaggggccgg
cagcagagcttggagtcaactgtagatgccttcacaggcttccgccccatctcccacttg
cacttttctcatgtgacttcctccagcgtcaacatcacctggagtgacccgtctcccccg
gcggacagactcattctgaactacagcccccgggatgaggaggaggagatgatggaggtc
tccttggatgctactaagaggcatactgtcctgatgggcctgcagccagccactgagtat
attgtgaacctggtggctgtccacggcacagtgacctctgagcccattgtgggctccatc
accacaggaattgatcctcccaaagacatcacaattagcaatgtgaccaaggactcgcta
actgtctcctggagccctccggctgcatcttttgattactaccgagtatcatatcgaccc
acccaagtgggacggctggacagctcagtggtgcccaacacggtgtcagaattcaccatc
accaggttgtacccagctaccgaatatgagatcagcctcaacagcgtgcgaggcagggaa
gagagtgagcgcatctgcaccctcgtgcacacagccatggacaaccctgtgggtctgact
gctaccaacatcacccctacagaagctctgctgcagtggaaggctccagtgggagacgtg
gagaactacgtcatcgtcctcacacactttgccgttgctggggagaccattttggtggat
ggagtcagtgaggagttccagctggtcaacttgcttcctcgcacaaactatacggtcacc
atgtacgccgccagtgggcccctcaccagtggcaccatcagcaccaacttctccaccctt
ttggaccctcctaccaacctgacggccagtgacatcaccaggcaaagcgcactgatctcc
tggcatcctcccagggccgagattgaaaactacatcttgacgtataaatccaccgatgga
agccgcaaagagctgattgtggatgcagaagacacctggatccgattggagggcctgtca
gagaacacagactacacagtgctcctgcaggcagcccaggacaccacccggagcagcctc
acctccaccgccttcaccacggggggccgagtgttctctcatcctcaagactgtgcccaa
catttgatgaatggagacactctgagtggggtttacaccatcttcctcaatggagagcga
agccagaagttgcaggtgtactgcgacatgaccacggatgggggcggctggattgtattt
caaaggcgacaaaatggccagactgactttttccgcaaatgggccgactaccgtgctggc
tttgggaacctggaagatgagttctggctagggctggacaacatacacaggatcacatcc
cagggccgctacgagctccgtgtggacatgcgggatggacaggaggcggtcttcgcccac
tatgacaagttctctgtggaggacagcagaaacctgtacaaactccgcataggaggctac
aacggcactgcaggagactccctcagctaccaccaggggcgccctttctccacagaggac
agagacaacgacgtcgcagtcaccaactgcgccatgtcctacaaaggcgcttggtggtat
aagaactgccaccggaccaacctcaacgggaagtatggggagtcccggcacagtcaggga
atcaactggtaccactggaaaggccacgagttctccatccccttcgtggaaatgaagatg
cgaccctacaaccaccgtgtctcagcagggaggaaacggcgggccttacagttctga
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integrated database retrieval system
