Dipodomys merriami (Merriam's kangaroo rat): 138835824
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Entry
138835824 CDS
T11079
Symbol
Tnn
Name
(RefSeq) tenascin-N
KO
K06252
tenascin
Organism
dmer Dipodomys merriami (Merriam's kangaroo rat)
Pathway
dmer04151
PI3K-Akt signaling pathway
dmer04510
Focal adhesion
dmer04512
ECM-receptor interaction
dmer05165
Human papillomavirus infection
dmer05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
dmer00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
138835824 (Tnn)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
138835824 (Tnn)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
138835824 (Tnn)
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
138835824 (Tnn)
09172 Infectious disease: viral
05165 Human papillomavirus infection
138835824 (Tnn)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
dmer00536
]
138835824 (Tnn)
Glycosaminoglycan binding proteins [BR:
dmer00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
138835824 (Tnn)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
Fibrinogen_C
Ig_DSCAM-DSCAML_C
DUF4998
EGF_TEN
Pur_ac_phosph_N
EGF_Teneurin
Fn3_Dep-1_2nd
NDNF
EGF_2
EGF_Tenascin
DUF4959
FN3_Tor_3rd
EGF
Motif
Other DBs
NCBI-GeneID:
138835824
NCBI-ProteinID:
XP_069890523
LinkDB
All DBs
Position
Unknown
AA seq
1648 aa
AA seq
DB search
MGVQGTLSFPLGLLLGSVLLVTSAPATPEPQGCSSKDQQVTVSHTYKIDVPKSALIQVEA
DPQSLSDDGTSLMALGEAGEEQNFIFRHNIRLQTPQKDCDLADSVQDLLARVKKLEEEMA
EMREQCSAQRCCLGAADVGRHCSGHGRFLPETCSCQCAPGWEGAACERPACPGACSGHGR
CVDGRCECDEPFAGADCAYPACPQGCSGHGRCVDGRCECDDDFTSEDCSELRCPGDCSGH
GFCDTGECYCEPGFTGLDCAQVVAPQGLQLLKSTEHSLLVSWEPTSDVDHYLLSYYPLGE
EPSLKQIQVPKEQHTYEIPGLMPGTKYIVTLRNVKKDTTSTPQHLLATTDLAVVGTAWVT
EETETSLDVEWENPLTDVDYFKLQYGPLTGQEVAEVNVPKSRDPKSRYDITGLKPGTDYK
ITVFPMRGGLEGKPILLNGRTEIDGPTNVVTNQVTEDSAAVSWKPVRADIDKYVVRYIAP
DGEAKEKAVPKDQSSTVLTGLKPGEAYKVFVWAERGNQGSKKADTKALTELDSPANLVTD
RVTENTASVSWDPVEADIDRYVVSYTSVDGETREVPVDKEKSSTVLTGLRPGVEYKVYVW
AQKGDRESKKANTKAPTDIDSPKNLVTDRVTENTISVSWEPVQASIDRYVVSYTSADGET
KEVPVGKEKTSTILTDLRPGMEYKVHVWAQKGTQESRKANTKAPTDIDSPKNLMTKQVTE
NTATVSWDPVEADIDKYVVRYTSADGETREVPVGKEKTSTVLTGLRPGVEYKVDVWAQKG
ARESRKVNTKAPTDIDSPKNLKTKQVTENTATLSWDPVEADIDRYVVRYTSADGETKEIP
VGKRTSTILTGLRPGVEYKVDVWAQKGARESRKANTKAPTDIDSPKNLVTEQVTENSATV
SWDPVEADIDRYVVRYTSVDGETRELLVGKDQSSTVLTGMRPGVDYIFEVWAQKGTRESK
KATTKAPTDIDGPKNLVTDQMTENTASVSWDPVEADIDRYVVRYTSADGETWEVPVDKEK
SSTVLTGLRPGVEYKFDVWAQKGIQESRKASTKAPTDIDSPKNLVTKQVTENSATVSWDP
VEADIDRYVVRYTSADGETREFLIGKDERSTVLTGLRPGVDYKFDVWAQKGARESRKAST
KAPTDIDSPKNLVTNQVTENTATISWDPVQADIDRYMVRYTSPDGETREIPVRKEKTSTV
LTGLRPGVEYTVHVWAQKGSRQSKKADTKAPTEIDSPKNLVTNRVTETTATISWEPVRAN
IDRYMVRYTSADGETREAPVSKDQSSTVLTGLRPGVEYTVHVWAKKGARESKKADTKALT
EIDPPRNFRPFGVTHSGGVLTWMSPTAQIDGYILTYQLPNGTVKEVRLQRGEQRFELQGL
EQGVTYPASLVAFKGDRRSKSVSTTLSTVDARFPHPSDCTQVQQNSNAASGLYTIYLNGD
ASRPMQVYCDMDTDGGGWIVFQRRNTGQLDFFKRWRSYVEGFGDPMKEFWLGLDKLHNLT
TGTPTRYEVRADLQTSNESAYAVYDFFQVASSKERYKLSVGKYRGTAGDALTYHNGWKFT
TFDRDNDIALSNCALTHHGGWWYKNCHLANPNGKYGETKHSEGVNWEPWKGHEFSIPYVE
LKIRPHGYSRDRFSGRKKRSLGGKMRMF
NT seq
4947 nt
NT seq
+upstream
nt +downstream
nt
atgggtgtccaggggacactcagcttccctttggggctcctgctgggctctgtgctcctg
gtgacctctgccccagccaccccggagcctcagggctgcagcagcaaggatcagcaggtc
accgtgagccacacatacaagatcgatgttcccaagtctgccctgatccaggtggaggcc
gacccgcagtccctcagcgatgatgggacctcactcatggccctgggggaggctggggaa
gaacagaatttcatcttcaggcacaacattcgccttcagacaccacagaaagactgtgac
ttggcagacagtgtccaggacctcctggcccgggtgaagaagctggaggaagagatggca
gagatgagggagcagtgtagtgctcaacgctgctgcctcggggctgcagacgtgggccgc
cactgcagcggccacgggcgcttcctcccggagacgtgcagctgccagtgcgcgccgggc
tgggagggcgcggcctgcgagcggcccgcgtgccccggggcgtgcagcggccacgggcgc
tgcgtggacgggcgctgcgagtgcgacgagcccttcgcgggcgccgactgcgcctacccg
gcctgcccgcagggctgcagcggccacgggcgctgcgtggacgggcgctgcgagtgcgac
gacgacttcacgtcggaggactgcagcgagctgcgctgccccggcgactgcagcggccac
ggcttctgcgacaccggcgagtgctactgcgagccgggcttcacgggcctcgactgcgcc
caggtggtggcacctcagggcctgcagctgctcaagagcaccgagcattccctgctggtg
agctgggagcccaccagtgacgtggaccactatctgctcagctactatcccctgggagag
gagccctccctcaagcagatccaagtgcccaaggagcagcacacctacgagattcccggc
ttgatgcctggcaccaagtacatcgtcaccctgcgcaacgtgaagaaagacacaaccagc
actccacagcatctgctggccaccacagatctcgctgtggtaggcactgcctgggtgaca
gaagagactgagacctccctggacgtggagtgggagaaccccctgacggatgtggactac
ttcaagctgcagtatggccccttgacagggcaggaggtggccgaggtgaatgtgcccaag
agccgcgaccccaagagtcgatatgacatcacgggtctgaagcctgggacagactataag
atcacagtttttcccatgagaggcggtctggaaggcaagccgattctcctgaatggcagg
actgaaattgatggtccaacaaatgtggtcactaatcaagtgacagaagactcagcggca
gtgtcctggaagcccgtgagggctgacatagacaagtacgtggtacgctacattgctcca
gacggggaagccaaggaaaaggcggtacccaaggaccagagcagcaccgtcttgaccggc
ctgaagccaggagaggcgtacaaagtctttgtgtgggctgagaggggcaaccaggggagc
aagaaggcggacaccaaagcgctcacagaacttgacagccctgccaacctggtgaccgac
cgggtgacagagaacaccgccagtgtctcctgggatccagtggaggctgacattgacagg
tatgtggtgagctacacctctgtcgacggcgagaccagggaggttccagtggacaaggag
aagagcagcaccgtcctcacaggcctgaggccaggcgtggagtacaaagtctacgtgtgg
gctcagaaaggggatagagaaagcaagaaggccaataccaaggcccccacagatattgac
agtcccaaaaacttggtgactgaccgggtgacagagaatacgatcagtgtctcctgggag
cctgtgcaggccagcatcgacaggtatgtggtgagctacacctctgctgatggagagaca
aaggaggttccagtggggaaagagaagaccagcaccatcctgacagacctgaggccaggc
atggagtacaaggtccatgtgtgggcccagaaagggacccaggagagcaggaaggccaat
accaaggcccccacagacattgacagccccaaaaacttgatgactaagcaggtgacagag
aacaccgccactgtttcctgggacccagtggaggccgacattgataagtatgtggtgcgt
tacacctctgcggatggagagaccagggaggttccagtggggaaagagaagaccagcacc
gtcctgacaggcctgaggccaggagtggagtacaaggtcgatgtgtgggcccagaagggg
gccagggagagcaggaaagtcaacacaaaggctcccacagacattgacagccccaaaaac
ttgaagactaagcaagtgacagagaacactgccaccctgtcctgggacccagtcgaggct
gacattgataggtatgtggtgcgctacacctctgcggatggagagaccaaggagattcca
gtggggaagaggaccagcaccatcctgacaggcctgaggccgggagtggagtacaaggtc
gatgtgtgggcccagaagggggccagggagagcaggaaggccaacacaaaggctcccaca
gacattgacagcccgaaaaacttggtcactgaacaggtgacagagaactctgccaccgtc
tcctgggacccggtagaggctgacattgacagatatgtggtgcgctacacctctgttgat
ggagagaccagggaacttctggttgggaaggatcaaagcagcaccgtcttgacaggcatg
agaccaggtgtggactacatatttgaagtgtgggcccagaaagggacccgggagagcaag
aaagccaccaccaaggcccccacagacattgatggcccgaaaaatctggtgactgatcaa
atgacagagaacaccgccagtgtctcctgggatccggtggaggctgacattgacaggtat
gtggtgcgctacacctctgctgatggagagacctgggaggttccagtggacaaggagaag
agcagcaccgtcctcacaggcctgaggccaggcgtggagtacaaattcgatgtgtgggcc
cagaaagggatccaagagagcaggaaggccagcaccaaggcccccacagacattgacagc
cccaaaaacctggtgactaagcaggtgacggagaacagtgccactgtctcctgggaccct
gtggaggccgacattgataggtatgtggtgcgctacacctctgcggatggagagaccagg
gaatttctgattgggaaggatgaaaggagcaccgtcctgacaggcctgaggccaggagtg
gactacaagtttgatgtgtgggcccagaagggggccagagagagcaggaaggccagcacc
aaggcccctacagacattgacagccccaaaaacctggtgaccaaccaagtgacagagaac
acagccaccatctcctgggacccagtacaggcagacatcgacaggtacatggtgcgctac
acctctcccgatggagagaccagggagattccagtgaggaaggagaagaccagcactgtc
ctgaccggcctgaggccaggcgtggagtacacggtccatgtgtgggcccagaaagggtcc
cgacagagcaagaaggccgacacaaaggctcccacagaaattgacagccccaaaaatctg
gtgactaaccgagtgacagagacaacagccaccatctcctgggagccagtacgcgccaac
attgacagatacatggtgcgctacacctctgctgatggagagaccagggaggctccggtg
tcaaaggatcagagcagcaccgtcctcacaggcctgaggccaggcgtggagtacacggtc
catgtgtgggccaagaaaggagcccgggagagcaagaaggctgacactaaggccctgaca
gaaatcgaccctcctagaaactttcgtccgtttggtgtcacacactctggcggggtgctg
acctggatgtcccccactgctcagatcgatggctacattctcacctaccagcttccaaat
gggacagtgaaggaggtgaggctccaaaggggcgagcagaggtttgagttgcaaggcctg
gagcagggcgtcacctaccctgcctctttggttgcctttaagggcgatcgccggagcaag
agtgtgtccaccaccctctccacagttgatgcccgtttcccacatccctcggactgcacc
caggtacagcagaacagcaacgctgccagcggcctctacaccatctacctcaatggcgac
gccagccggcccatgcaggtgtactgtgacatggatacggatggaggcggctggattgtc
ttccagagacggaacaccggacagctggatttcttcaagcgttggcggagctatgtggaa
ggctttggggatcccatgaaagagttctggcttggccttgacaagctgcacaatctcacc
actggcactcctacccggtatgaggtgagggcagatttacagacttccaatgaatctgcc
tacgctgtatatgatttcttccaagtggcctccagcaaggaacgatataagctgtcagtg
gggaaatacagaggcacagcaggggatgctctcacttaccacaatggatggaagttcaca
acttttgacagggacaacgatattgccctcagcaactgtgccctgacacatcacggtggc
tggtggtataagaactgccacttggccaaccccaatggcaaatacggggagaccaagcat
agcgagggggtgaactgggagccgtggaaaggacatgaattctccatcccttatgtggaa
ctgaaaatccgccctcatggctacagccgagatcgtttctctggcagaaagaagaggtca
ctgggaggaaagatgagaatgttctga
DBGET
integrated database retrieval system
