Dipodomys merriami (Merriam's kangaroo rat): 138836447
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Entry
138836447 CDS
T11079
Symbol
Nup98
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96 isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
dmer Dipodomys merriami (Merriam's kangaroo rat)
Pathway
dmer03013
Nucleocytoplasmic transport
dmer05014
Amyotrophic lateral sclerosis
dmer05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
dmer00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
138836447 (Nup98)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
138836447 (Nup98)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
138836447 (Nup98)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dmer03019
]
138836447 (Nup98)
03036 Chromosome and associated proteins [BR:
dmer03036
]
138836447 (Nup98)
Messenger RNA biogenesis [BR:
dmer03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
138836447 (Nup98)
Chromosome and associated proteins [BR:
dmer03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
138836447 (Nup98)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
138836447
NCBI-ProteinID:
XP_069891232
LinkDB
All DBs
Position
Unknown
AA seq
1816 aa
AA seq
DB search
MFNKSFGTPFGGSTSGFGTTSTFGQNTGFGTTSGGAFGTSAFGSSNNTGSLFGNSQTKPG
GLFGTSSFSQPATSTSTGFGFGTSTGTSNSLFGSSSTGTSLFSSQNNAFAQNKPTGFGNF
GTSTSSGGLFGTTNTTSNPFGSTSGSLFGPSSFTAAPTGTTIKFNPPTGTDTMVKAGVST
NISTKHQCITAMKEYESKSLEELRLEDYRANRKGPQNQVGAGTTAGLFGSSPATSSAAGL
FSSSTTNSGFAYGSNKTAFGTSTTGFGTNPGGLFGQQNQQTTSLFSKPFGQATTTQNTGF
SFGNTSTLGQPSTNTMGLFGVTQASQPGSLFGTATNTSTGTAFGTGTGLFGQTNTGFGAV
SSTLFGNNKLTTFGTSTTSAPSFGTTSGGLFGNKPTLTLGTNTNTSNFGFGTNTSGSSIF
GSKPAPGTLGTGIGTGGFGTALGPGQASLFGNNQPKIGGPLGTGAFGAPGFNTTTATLGF
GAPQAPIALTDPNASAAQQAVLQQHLNSLTYSPFGDSPLFRNPMSDPKKKEERLKPTNPA
AQKALTTPTHYKLTPRPATRVRPKALQTTGTSKSHLFDGLDDDEPSLANGAFMPKKSIKK
LVLKNLNNSNLFSPVNRDSEDLASPSEYPENGERFSFLSKPVDENHQQDGDEDSLVSHFY
TNPIAKPIPQTPENVGNKHNSNSVDDTIVALNMRVALRNGLEGSSEETSFHDESLQDDRE
EIENNSYHMHPAGIVLTKIGYYTIPSMDDLAKITNEKGECIVSDFTIGRKGYGSIYFEGD
VNLTNLNLDDIVHIRRKEVIVYLDDTEKPPVGEGLNRKAEVTLDGVWPTDKTSRCLIKSP
DRLADINYEGRLEAVSRKQGAQFKEYRPETGSWVFKVSHFSKYGLQDSDEEEEEHPSKTS
SKKLKTAPLPPAGQTTPFQMALNGKPASPPQTQSPEVEQLGRVVELDSDMIDITQEPVLD
SVLEEGMPEDQEPVSASTHIASSLGINPHVLQIMKASLLADEEDVDSMDQRFGHLPAKGD
IAQEICSPRLPISASHSSKSRSIVGGLLQSKFASGVFLSPSASVQECRIPRASSMMNISS
PSPWSAPPPLTTVFTVPSPSPEVQLKTVGTRRQLGLVPLEKSVTYGKGKLLMDMALFMGR
SFRVGWGPNWTLANSGEQLNSSHELESHQAADSMEYGFLPNPVAVKSLTESPFKVHLEKL
SLRQRRLDEDLQLYQTPLELKLKRSTVHVDELCPLIVPNAGVEVIHDYANWVKEVSRDVL
EAQIVKPWSLTWTLCEALWGHLKELDNQLDEPIEYIQILERRRAFSRWLSHTAAPQIEEE
VSLTRKDNPIEAVFSYLTGNRISEACSLAQHSGDHRLALLLSQLVGSQSVRELLTMQLAD
WHQLQADCFIQDERLRIFALLAGKPVWQLSEQKQINVCSQLDWKRSLAVHLWYLLPPTAS
ISRALSMYEEAFQNTSEGDRYACSPLPSYLEGSGCLIEEEQDSQRPLQDVCFHLLKLYSD
RHYDLNQLLEPRSITADPLDYRLSWHLWEVLRALNYTHLSEQCEGVLQASYAGQLESEGL
WEWAIFVLLHIENSSMREKAVRELLTRHCQLVETPESWAKETFLTQKLCVPAEWIHEAKA
VRAHMESDKHLEALYLFKAGHWNRCHKLVIRHLASDAIINENYDFLKGFLEDLAPPEHSS
LIQDWETSGLVYLDYIQVIEMLHHIQQVDCSGYELEKLHTKVTSLCNRIEQIQCHNAKDR
LAQSDMAKRIANLLRVVLSLQHVPDATSESTPDPQRVPLRLLAPHIGRLPMPEDYALDEL
RSLTQSYLRELTVGSQ
NT seq
5451 nt
NT seq
+upstream
nt +downstream
nt
atgtttaataagtcatttggaaccccctttgggggtagtacaagtggctttggtacaaca
tcaacatttggacaaaacactggctttggcaccactagcggaggggcatttggaacatct
gcatttggttctagcaacaatactggaagcttatttggaaattcacagaccaaaccagga
ggattatttggtaccagttcatttagccagccagctacctccacaagcactggttttggg
tttggtacatcaacaggaacatcaaatagcttgtttggatcttcaagtacagggaccagt
ctcttctcatcccaaaacaatgcctttgcacaaaataaaccaactggctttgggaatttt
ggaacaagtacaagcagtgggggactcttcggaacaacaaataccacctctaatcctttt
ggtagtacctcaggctccctttttgggccaagtagttttacagcagcacctactgggact
accattaaatttaatcctccaactggtacagatactatggttaaagctggagttagcacc
aacatcagtaccaagcaccagtgtattactgctatgaaagaatatgaaagcaaatcacta
gaggaacttcgtttagaggattatcgggctaacaggaaaggtccgcagaatcaggtggga
gcagggaccacagctggcttatttggatcttcaccagccacctccagtgcagccggactc
ttcagctcctccaccactaactcaggctttgcatatggttcgaacaaaactgcctttgga
actagtacaactggatttggaacaaatccaggtggtctctttggccagcagaatcaacag
actaccagcctcttcagcaaaccatttggccaggccacaactacccagaacactggcttt
tcctttggtaacaccagcacccttggacagccaagtactaataccatgggtttatttgga
gtaacccaagcctcacagcctggaagtctttttgggacagctacaaacaccagcactggg
actgcttttggaacaggaacaggtctctttgggcagaccaatactgggtttggtgcagtt
agttcgaccctgtttggcaataacaagcttactacatttggaaccagtacaaccagtgct
ccttcatttggtacaaccagtggcgggctctttggtaacaaaccaaccctgactttagga
accaatacaaacacttccaattttggttttggcacaaataccagtgggagtagtattttt
ggaagtaaaccagcacctgggactctgggaactggtattggtacaggaggatttggaaca
gctcttggtcctggacaggcatctttgtttgggaacaaccaacctaagattggagggcct
cttggtacaggagcctttggagcccctggatttaatactacaacagccactttgggcttt
ggtgccccccaggctccaatagctttgacagatccaaatgcttctgctgctcagcaggct
gttctccagcagcatctcaatagtctaacatattcaccttttggagactctcctctcttc
cggaatcccatgtcagaccccaagaagaaagaagagagattaaagccaacaaatccagca
gcccagaaggctcttactacacctacacattataaactgacacctcgacctgctaccaga
gtccgaccaaaggctctgcaaacaacaggcacatccaaatcccatctgtttgatgggctt
gatgatgatgaaccatcccttgcgaatggagcattcatgcccaagaagagcattaagaaa
ttagttttgaagaaccttaacaacagcaatctcttttctcctgttaatcgtgattcagaa
gatctagcttcaccatctgaatatccagaaaatggagagagatttagtttcctgagcaaa
cctgttgatgaaaaccatcagcaggatggagatgaagattctcttgtatcccatttttat
actaaccctattgccaaaccaattcctcaaactccagagaatgttggcaataaacacaac
agcaacagtgtggatgataccattgttgcactgaacatgcgagttgctttgcgaaatggt
ctagaaggaagtagtgaagaaacttccttccatgatgagtcactgcaagatgaccgagag
gaaatagaaaataattcttatcatatgcatccagcaggcattgttctcactaagattggt
tactatactattccatctatggatgaccttgctaaaattaccaatgaaaaaggagaatgc
atcgtctctgacttcactattggtcgtaaaggttatggctcaatctatttcgaaggagat
gtgaatttaacaaatctaaatttggatgacattgtgcatatccggaggaaagaagttatt
gtctacttagatgataccgaaaaaccacctgtgggtgaagggctgaatagaaaggctgaa
gttacattggatggagtttggccaacagataaaacatcacgttgtttaataaagagtcca
gatagacttgctgacatcaactatgagggaagattggaagcagtttcaaggaaacaggga
gcccaattcaaggagtaccggcctgaaactggttcttgggtgtttaaggtctcccatttt
tccaaatatggccttcaggattctgatgaagaggaggaagaacacccatccaaaactagt
tcaaagaagttgaagactgcccctttgcctcctgcaggccagactacccctttccagatg
gctcttaatggcaaacctgcatctccacctcagactcagagcccagaggtggaacagtta
gggagggttgtggagctggacagtgacatgatagatattacccaggagccagttttggat
tccgtgttagaagaaggcatgcctgaggatcaagaacctgtgtctgcttcaacacatatt
gcatcttcactgggaattaatccacatgtcttacagattatgaaagcatcattgcttgct
gatgaagaagatgtagactccatggatcaacgctttggtcatcttcctgccaaaggagat
attgctcaagaaatctgttctccccgactccccatttcagcatcccattcatcaaaatcc
cgttcaatagttggtgggttactacaatcaaaatttgcaagtggcgtttttctttcacca
agtgcctctgtgcaagaatgtcgaattcccagagcatcatctatgatgaatatctcatcc
ccttctccttggtctgcccctccacccctgaccacagtgtttacagtgcccagtccaagt
cctgaggttcagctcaagacagtgggaacacgcagacaactaggcctagtccctcttgaa
aagtctgtcacgtatggcaagggaaaactcttgatggacatggccctattcatgggacgc
tcatttcgagttggttggggccctaactggactcttgctaatagtggagaacagctgaat
agctctcatgaactggaaagtcatcaggctgccgattctatggaatatggattcttgccc
aatcccgtagctgttaaatccctgacggaatccccattcaaagttcatttagaaaaactc
agtttgagacaaaggagactggatgaagatctgcaattatatcagacacctctggagctc
aaattaaaacgaagcacggtccatgtggatgaactgtgtcctctcattgtccccaatgca
ggagttgaggtcattcatgattatgctaactgggttaaggaagtatccagagatgtattg
gaagcacaaattgtgaagccctggagcctcacatggacattatgtgaagccctatggggt
cacctgaaggaacttgacaaccagctagatgagcccattgaatacattcagattctggaa
cgaagaagagctttttctcgctggctatcccatactgctgcacctcagattgaagaagaa
gtttccttaacccgaaaagacaaccctatagaggctgtcttcagctacctcacaggcaac
aggatcagtgaggcctgctctcttgcacagcattcaggggatcatcgccttgccctcctt
ttatctcagttggtgggtagccagtcagtccgggagctactcaccatgcagctggctgat
tggcatcagctccaggctgactgtttcatccaggatgagagattgcgcatctttgccctc
ttggctggaaaaccggtatggcagctctcagagcagaagcaaatcaatgtgtgctctcag
ctggattggaaacgttcccttgctgtacatctttggtatttgcttccaccaacagcctct
atttccagagcactcagcatgtatgaagaagcatttcagaatacttctgagggtgacagg
tatgcctgttccccgcttccttcatacctagagggttctggctgtttgatagaggaggag
caagactcgcagagaccacttcaagatgtttgttttcaccttctaaaactctacagtgac
agacattatgatctcaatcagctgctggagcctcgaagcataactgcagatcctttggac
tatcgcctaagctggcacttgtgggaagtgctgcgggctcttaattatacccatctctca
gagcagtgtgagggtgtgctgcaggccagttatgctggccaactggaaagtgagggtctc
tgggagtgggccatctttgttctcctgcacattgaaaactcaagcatgcgcgagaaggct
gttcgagagctgcttacccggcactgccagctggtggagacccctgaatcttgggctaag
gagacattccttacccagaaactttgtgtacctgctgagtggattcatgaggccaaagct
gtgcgagcccacatggaatctgataagcatttagaggctctctatttgtttaaagctggt
cactggaaccgctgccacaaacttgtcatccgacacttagcttctgatgccatcattaat
gagaactatgactttctgaagggttttttggaagacctggcacctccagaacacagtagc
ctaattcaggactgggaaacatctgggctcgtttacctggactatattcaagtcattgaa
atgctccatcatattcagcaggtggattgctcaggttatgaactagagaagttacatacc
aaagtgacatcactgtgcaaccgcatagaacagatccagtgtcacaatgccaaggatcgt
ctagctcaatcagacatggccaagcgtatagccaatttgctgcgggtggtactgagcctt
cagcatgtccctgatgcaacttcagaatcaacaccagaccctcagcgagtccctttacgc
ctactggctccacacattggccggctgcccatgcctgaggactatgccttggatgaactg
cgcagtctcacacagtcctatctacgagaactgactgttgggagccagtga
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integrated database retrieval system
