Dipodomys merriami (Merriam's kangaroo rat): 138836804
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Entry
138836804 CDS
T11079
Symbol
Tmc1
Name
(RefSeq) transmembrane channel-like protein 1
KO
K21988
transmembrane channel-like protein
Organism
dmer Dipodomys merriami (Merriam's kangaroo rat)
Pathway
dmer04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
dmer00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
138836804 (Tmc1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dmer02000
]
138836804 (Tmc1)
03037 Cilium and associated proteins [BR:
dmer03037
]
138836804 (Tmc1)
Transporters [BR:
dmer02000
]
Other transporters
Pores ion channels [TC:
1
]
138836804 (Tmc1)
Cilium and associated proteins [BR:
dmer03037
]
Other cilia and associated proteins
Stereociliary proteins
138836804 (Tmc1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TMC
PUB_ORF2p
Toddler
Motif
Other DBs
NCBI-GeneID:
138836804
NCBI-ProteinID:
XP_069891536
LinkDB
All DBs
Position
Unknown
AA seq
813 aa
AA seq
DB search
MEGKMELEVMDMEGKTVEDTGTSNCFLNRTVISQEIIARMDKWDCIKLKTFCTSENAQHE
VKIQVEEKEEDTEESSSEEEGDKLPRRESLRPKRKRKRDVINEDDPEPEPEDEETRKARE
KERRRRLRRGAEEEEEIDQEELERLKAELDEKRQMIANVKCKPWKMEKKIEVLKEAKKFV
SENEGALGKGKGKQWFAFKMMMAKKWAKFLRDFENFKAACVPWENKIKAVESQFGSSVAS
YFLFLRWMYGVNMVLFILTFTLIMLPEYLWGLPYGSLPRKTVPRAEEASAANFGVLYDFN
GLAQYSILFYGYYDNKRTIGWLNFRLPLSYFLVGIMCIGYSFLVVLKAMTKNIGDDGGGD
DNTFNFSWKVFCSWDYLIGNPETADNKFNSITMNFKEAITEERAAQVEENVHLIRFLRFL
ANFFVFLTLGASGYLIFWAVKRSQEFAQQDPDTLGWWEKNEMNMVMSLLGMFCPTLFDLF
AELEDYHPLIALKWLLGRIFALLLGNLYVFILALMDEINNKIEEEKHVKANITLWEANMI
KAYNASLSGNTTGPPFYVHPADVPRGPCWETMVGQEFVRLTVSDVLTTYVTILIGDFLRA
CFVRFCNYCWCWDLEYGYPSYTEFDISGNVLALIFNQGMIWMGSFFAPSLPGINILRLHT
SMYFQCWAVMCCNVPEARVFKASRSNNFYLGMLLLILFLSTMPVLYMIVSLPPSFDCGPF
SGKNRMFEVIGETLENDFPSWMAKILRQLSNPGLVIAIILVMVLAIYYLNATAKGQKAAN
LDLKKKMKLQALENKMRNKKMAAARAAAAAGGQ
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atggagggcaaaatggagttagaggtaatggacatggagggaaaaacagtagaagataca
ggcacaagtaattgttttctgaacaggactgtgatttcccaggaaataatagcaagaatg
gataaatgggactgtatcaaactgaaaactttctgcacatcagagaatgcccaacatgaa
gtgaaaatccaagtggaggaaaaagaagaggatactgaggaaagctcaagtgaagaagag
ggagacaaactacctaggagagagagcttaagaccaaagaggaaacggaagagagatgtt
atcaatgaagatgacccagaacctgaaccagaggatgaagaaacaaggaaggcaagagaa
aaagaaagaaggaggagattgagaagaggagcagaggaagaagaagaaattgaccaggaa
gaattggaaagattgaaggcagagttagatgagaagagacaaatgattgctaatgtcaaa
tgcaaaccttggaaaatggagaagaaaattgaagttctcaaggaagcaaaaaaattcgtg
agcgagaatgaaggggctcttgggaaaggaaaaggaaagcagtggtttgcatttaagatg
atgatggccaagaaatgggcaaaattcctccgtgattttgagaacttcaaagctgcttgt
gtcccatgggaaaacaaaatcaaggcagttgaaagtcagtttggttcatcggtggcttca
tacttcctcttcctgagatggatgtatggcgtaaatatggttctctttatcctgacattt
accctgatcatgcttcctgagtacctctggggtttaccatatggcagcttacccaggaaa
accgtcccaagagccgaagaagcttctgcagccaattttggcgtgctgtatgacttcaat
ggtttggcacaatattccatcctcttttatggctactatgacaataaacgaacgatcgga
tggctgaacttcagacttcccctgtcttatttcctggtggggatcatgtgcatcggatac
agctttctggttgtcctcaaagcgatgaccaaaaacattggtgacgacggaggtggcgat
gacaatactttcaacttcagctggaaggtcttctgcagctgggactacctcataggcaac
cccgaaacagctgacaacaaattcaattccatcacgatgaactttaaggaagctatcaca
gaagaaagagccgcccaagtagaagaaaacgtccatctgatcagattcctgagatttctg
gctaacttctttgtgtttctgacactcggtgccagtggctacctcatcttttgggccgtg
aaacgatcccaggaatttgcacagcaagatcctgacaccctggggtggtgggagaaaaat
gaaatgaacatggttatgtctctcctgggaatgttctgtccaacgctgtttgacttattt
gctgaactggaagattatcatcctctcattgctctgaaatggcttctgggacgcattttc
gctcttcttttaggcaacttgtatgtttttattcttgctctgatggatgagattaacaac
aagattgaagaagagaagcatgtgaaggccaatatcacactgtgggaggccaacatgatc
aaggcctacaacgcatccctctcagggaataccaccgggcctcccttttacgtgcatcct
gcagatgtaccacgaggaccctgctgggaaacaatggtgggacaggaattcgtgcggctg
actgtttctgatgttctcaccacttacgtcacaatcctcattggtgatttcctcagggcg
tgttttgtaaggttttgcaattattgctggtgctgggatttggaatatggatatccttca
tacacagaatttgatatcagtggcaacgtcctcgctttgatcttcaatcaaggcatgata
tggatgggctccttcttcgctcctagcctccctggcatcaatattctccggctccacacg
tccatgtacttccagtgttgggcagtgatgtgttgcaacgttcctgaagccagggtcttc
aaagcgtccagatcaaataatttctacctgggcatgttgctgctcatcctcttcctgtcc
accatgcctgtcctgtacatgatcgtgtctctcccgccatcttttgattgtggtcctttc
agtggcaaaaacagaatgtttgaagtcattggtgagactctagagaatgacttcccaagc
tggatggcaaaaattttgagacagctttccaaccctggactagtcatcgctatcattctg
gtgatggtcttggccatctattatctcaatgcaactgccaagggccaaaaggcagcaaat
ctggacctgaagaagaagatgaaactgcaagctttggagaacaagatgagaaacaagaag
atggcagccgcaagagcagctgcagctgctggtgggcagtaa
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