Dipodomys merriami (Merriam's kangaroo rat): 138836917
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Entry
138836917 CDS
T11079
Symbol
Rabgef1
Name
(RefSeq) rab5 GDP/GTP exchange factor isoform X1
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
dmer Dipodomys merriami (Merriam's kangaroo rat)
Pathway
dmer04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
dmer00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
138836917 (Rabgef1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dmer04131
]
138836917 (Rabgef1)
Membrane trafficking [BR:
dmer04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
138836917 (Rabgef1)
Protein recycling
Other Rab GTPase associated proteins
138836917 (Rabgef1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS9
DUF5601
zf-A20
CID_GANP
Motif
Other DBs
NCBI-GeneID:
138836917
NCBI-ProteinID:
XP_069891712
LinkDB
All DBs
Position
Unknown
AA seq
492 aa
AA seq
DB search
MSLKSERRGIHVDQSELLCKKGCGYYGNPAWQGFCSKCWREEYHKARQKQIQEDWELAER
LQREEEEAFASSQSSQGAQSLTFSKFEEKKTNEKTRKVTTVKKFFSASSRVGSKKAEIQE
AKAPSPSINRQTSIETDRVSKEFIEFLKTFHKTGQEIYKQTKLFLEGMYCKRELSIEEQS
ECTQDFYQTVAERMQTRGKVPPERVEKIMDQIEKYIMTRLYKHVFCPETTDDEKKDLAIQ
KRIRALHWVTPQMLCVPVNEEIPEVSDMVVKAITDIIEMDSKRVPRDKLACITRCSKHIF
NAIKITKNEPASADDFLPTLIYIVLKGNPPRLQSNIQYITRFCNPSRLMTGEDGYYFTNL
CCAVAFIEKLDARSLNLSQEDFDRYMCGQSSPRKQEAESWSSDSCWGVEQMYKNLDLLSQ
LNERQERLMSEAKKLEKDLIDWTDGIAKEVQDIVEKYPLEIKPPSQPLAAIDSENVENDK
LPPPLQPQVYAG
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgagcctcaagtctgaacgccgaggaatacatgtggatcagtcagagctcctctgcaag
aaaggatgtggctactacggcaaccctgcctggcagggcttctgctccaagtgttggagg
gaggagtaccacaaagccaggcagaagcagattcaggaggactgggaactggcagaacga
cttcagcgggaagaagaagaggcctttgccagcagtcagagcagccaaggagcccaatct
ctcacattttccaaatttgaagaaaagaaaaccaatgaaaagacccgcaaggttacaaca
gtgaagaaattcttcagtgcttcctccagggttggatccaagaaagcagaaatccaggaa
gcgaaagctcccagtccttctataaatcggcaaaccagcattgaaactgatagagtctct
aaggagttcatagaatttctcaagaccttccacaagacaggacaagaaatctacaaacag
accaagctgtttttggaaggaatgtattgtaaaagggaattgagcattgaggagcagtca
gagtgtacgcaggacttttaccagactgtggctgaacggatgcagactcgtggaaaagtg
cctccagaaagggttgagaagataatggaccagattgagaagtacatcatgacacgcctg
tacaaacatgtgttctgcccagagaccactgatgacgagaagaaagaccttgccattcaa
aagaggattagggccctgcactgggttactcctcagatgctctgtgtccctgttaatgaa
gaaattccagaagtgtctgatatggtggtgaaggcaattacagatatcattgaaatggac
tcgaagcgggtacctcgagataagctggcctgtatcaccaggtgtagcaagcacatattc
aacgccatcaagatcactaagaatgagccggcatcggccgatgacttcctgcccaccctc
atctacattgtgctgaagggtaacccgccgcgcctgcagtccaacatccagtacatcacg
agattctgcaatcccagccgcctgatgactggcgaggatggctactatttcaccaacctg
tgttgtgctgtggctttcattgagaagttagacgcccggtcactgaatctaagtcaggag
gactttgaccgatacatgtgtggccagagttcaccccggaaacaggaggccgagagctgg
tcttctgactcttgctggggtgtggagcagatgtacaagaacttggacctcctgtctcag
ttgaatgagcgtcaggaaaggctcatgagtgaggccaagaagctggaaaaagacttaata
gattggacggatgggattgcaaaagaggtacaagacattgtggagaaatacccacttgaa
attaagcctccgagtcagcccttagcagccattgactctgaaaatgtggagaatgacaaa
ctacctccacccctgcaacctcaagtgtatgcaggttga
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