Dipodomys merriami (Merriam's kangaroo rat): 138836988
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Entry
138836988 CDS
T11079
Symbol
Smc5
Name
(RefSeq) structural maintenance of chromosomes protein 5 isoform X1
KO
K22803
structural maintenance of chromosomes protein 5
Organism
dmer Dipodomys merriami (Merriam's kangaroo rat)
Brite
KEGG Orthology (KO) [BR:
dmer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dmer03400
]
138836988 (Smc5)
DNA repair and recombination proteins [BR:
dmer03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
138836988 (Smc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_15
AAA_13
AAA_21
Med9
AAA_29
SMC_hinge
AAA_25
CCDC39
NIT
Motif
Other DBs
NCBI-GeneID:
138836988
NCBI-ProteinID:
XP_069891814
LinkDB
All DBs
Position
Unknown
AA seq
1102 aa
AA seq
DB search
MATPSRKTTAPSPLASKRPLSTDLSSEIPSKRKNSTPPLSLLPSSGSFVEGSIVRIAMEN
FLTYDVCEVSPGPHLNMIIGANGTGKSSIVCAICLGLAGKPAFMGRADKVGFFVKRGCSK
GMVEIELFRTSGNLIITREIDVTKNQSFWFINKRSTTQKVVEEQVAALNIQVGNLCQFLP
QDKVGEFAKLSKIELLEATEKSIGPPEMHRYHCELKNFREKEKQLETSCKEKTEYLEKMV
QRNERYKQDVERFYERKRHLDLIEMLEAKRPWVEYENVRQEYEGVKLARDQVKEEVRKLK
EGQIPITNRIQEIERERHNMEALIKGKATNIKETSQKCKQKQELIEKKDKNIEDLQQELI
VKQNAEHDLQRRISNARKMIEDLQNELKTAENCENLQPQIDAITNDLRRIQDEKGLCEGE
IIDKRRERETLEKEKQNVDGHITRFDNLMHQKEDKLRQRFRDTYDAVLWLRNNRDKFRQR
VCEPIMLTINMKDNKNAKYVENHIPSNDLRAFVFESQEDMEIFLREVRDNKKLRVNAVMA
PRISYADKAPSRSLNELRQYGFFSYLRELFDAPDPVMSYLCCQYHIHEVPVGTERTRERI
ERVIKETRLRQIYTAEEKYVVKTSFYSNKVISSNTSLKVAQFLTVTVDLEQRRHLEEQLK
EINRKLQAVDSGLIALRDTNKHLEHKDNELRQKKKELLDRKTKKRQLEQKLSSKLESIKL
MEQDSCNLEEEERKTSTKIKELNVQKAKLVTELTNLVKICTSLHMQKVDLILQNTTMISE
KNKLESDYVAASSKLRVTEQQFVELDENRLRLLQKCKELMKRARQVCNLRAEQIVPQEYQ
TQVPTIPNGHNSSLPMAFQDLPNTLDEIDALLTEERSRASCFTGLNPTVVEEYAKREKEI
EQLTEELKKKRAELDTYRESISQVKERWLNPLKELVEKINEKFSNFFSSMQCAGEVDLHT
ENEEDYDKYGIRIRVKFRSSTQLHELTPHHQSGGERSVSTMLYLMALQELNRCPFRVVDE
INQGMDPINERRVFEMVVNTACKENTSQYFFITPKLLQNLPYSEKMTVLFVYNGPHMLEP
NRWNLKAFQRRRRRITFTQPSQ
NT seq
3309 nt
NT seq
+upstream
nt +downstream
nt
atggcgactcccagccggaagacgacagcccccagccccctggcttccaagaggccgctc
tcgacagacctttcttcggagatcccgagcaagaggaagaactcgaccccgccgttgtcg
ctgctgccgtcatccgggtctttcgtggagggctccatcgtccgcatcgccatggagaac
ttcctaacatatgatgtctgtgaagtatctcctggaccccacttgaatatgattattgga
gctaatggaacaggaaagtcaagcattgtatgtgccatttgtcttgggttagcaggcaaa
cctgctttcatgggacgcgcagataaggttggattttttgtgaagagaggatgttccaaa
ggcatggttgaaattgaattgttcaggacttctggaaatcttataatcacccgagagatt
gatgtgacaaaaaatcagtccttttggtttatcaacaaaagatctacaactcagaaagta
gtagaagagcaagttgcagccttaaatattcaagtgggcaacctttgccagtttctacct
caggacaaagttggagaatttgctaaactcagcaaaattgaactccttgaagctactgag
aagtcaattggtcctccagaaatgcacaggtatcactgtgaactcaaaaacttcagggag
aaggaaaaacaactggagacctcatgcaaagagaaaactgaatacctagagaaaatggtt
cagagaaacgaaagatacaaacaagatgtggaaaggttctatgaacgtaagcgacattta
gatttaattgagatgcttgaggcaaaaagaccatgggtggaatatgaaaatgttcgtcag
gaatatgaaggagtaaaactagcccgtgatcaagtgaaggaagaagtcagaaaacttaaa
gaagggcagattcctatcacaaatcgaattcaagaaatcgaaagggaacgtcataatatg
gaggctctaatcaaaggaaaggcaacaaacattaaggagacatcacaaaaatgcaaacaa
aagcaagaacttattgaaaagaaagataaaaatattgaagatcttcaacaggagttaata
gtaaaacaaaatgcagagcatgatctacagaggagaataagcaatgccagaaaaatgata
gaggatttgcaaaatgaattaaagactgctgaaaattgtgagaatcttcagcctcaaatt
gatgccattacaaatgatttgagacgaattcaggatgaaaagggattatgtgaaggcgag
attattgataaacgaagagagagagagactctagagaaggagaaacagaatgtggatggc
catattacacgttttgataatcttatgcatcaaaaggaagataaactgagacagagattc
cgggatacatatgatgctgttctgtggctgagaaataatagagataaatttagacaaaga
gtctgtgagcccataatgcttacgatcaatatgaaagataataaaaacgccaaatatgtt
gaaaatcacattccgtctaatgacttgagagcctttgtttttgaaagtcaagaggatatg
gagattttcctcagagaggttcgtgacaataaaaaattaagagtaaatgctgttatggct
cccaggatttcatatgcagacaaagcaccttccagatctctgaatgaactaagacaatat
ggatttttctcttacttacgagaattatttgatgcacctgaccctgtaatgagttatctt
tgttgtcagtatcatattcatgaagttcctgtcgggactgaaaggaccagagaaagaatt
gagcgggtaataaaagaaactcgtttaagacaaatttacacagcagaagaaaagtatgtg
gtgaaaacgtctttttattcaaacaaagttatttctagtaacacatcccttaaagttgcc
cagttcctcacagttactgtagatctagagcaaagaagacacttggaagaacaactaaag
gaaattaatagaaaattgcaagcagtggactcaggattgattgctttgcgtgatacaaac
aaacatctagaacacaaagacaatgaacttagacaaaagaagaaggaacttcttgacaga
aaaaccaagaagaggcaactggaacaaaaacttagttccaagctagaaagcataaaactg
atggaacaggactcttgcaacctggaagaagaggaacgaaaaacaagtaccaaaatcaaa
gagttaaatgttcagaaagcaaaacttgttactgaattaacaaacctagtaaagatttgt
acttctttgcatatgcaaaaggtagatttaatccttcagaatacgacaatgatttctgag
aagaacaaattagagtcagattatgtagctgcatcttcaaaactacgtgtcacagagcaa
cagtttgttgagttggatgaaaacagactaagattattacagaaatgcaaagaacttatg
aagcgagcgaggcaagtatgtaacctgcgtgcagagcagattgttcctcaagaatatcag
acacaagtgcccaccattccaaatggacacaactcctcactccccatggccttccaagat
cttccaaacaccttggatgaaatcgatgctctgttaacagaagaaagatcaagagcttcc
tgcttcacaggactaaatcctacagtggttgaagaatatgcaaaaagagaaaaagaaata
gagcagttaactgaggaactaaagaaaaaaagagctgaactagatacatatagggaaagc
atttcacaggtaaaagaaagatggcttaatcccttaaaggagctagtagaaaaaattaat
gaaaaattcagcaacttttttagttccatgcagtgtgctggtgaagttgatctccataca
gaaaatgaggaagactatgataaatacggaattcgaatcagagtcaaatttcgaagtagt
actcaactgcatgaattgactcctcatcatcaaagtggaggcgaaagaagtgtttccacc
atgttatacttgatggcacttcaggagcttaataggtgtccattcagagtagttgatgaa
atcaatcagggtatggacccaatcaatgaacggagagtgtttgaaatggttgtaaacacg
gcctgtaaagaaaacacatctcagtacttctttattacaccaaagctcctgcagaatctt
ccttactctgaaaaaatgacagtgttgtttgtctacaatggtcctcatatgctggaacca
aacaggtggaatttaaaggccttccaaaggcggagacgccgtatcacattcactcaacct
tctcaatga
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