Dipodomys merriami (Merriam's kangaroo rat): 138838155
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Entry
138838155 CDS
T11079
Symbol
Ube4b
Name
(RefSeq) ubiquitin conjugation factor E4 B
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
dmer Dipodomys merriami (Merriam's kangaroo rat)
Pathway
dmer04120
Ubiquitin mediated proteolysis
dmer04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
dmer00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
138838155 (Ube4b)
04120 Ubiquitin mediated proteolysis
138838155 (Ube4b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dmer04121
]
138838155 (Ube4b)
Enzymes [BR:
dmer01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
138838155 (Ube4b)
Ubiquitin system [BR:
dmer04121
]
Ubiquitin ligases (E3)
U-box type E3
138838155 (Ube4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ufd2P_core
U-box
DUF4568
Motif
Other DBs
NCBI-GeneID:
138838155
NCBI-ProteinID:
XP_069893414
LinkDB
All DBs
Position
Unknown
AA seq
1173 aa
AA seq
DB search
MEELSADEIRRRRLARLAGGQTSQPTTPLTSPQRENPPGPPIAASAPGPSQSLGLNVHNM
TPATSPIGAAGVAHRSQSSEGVSSLSSSPSNSLETQSQSLSRSQSMDIDGVSCEKSMSQV
DVDSGIENMEVDENDRREKRSLSDKEPSSGPEVSEEQALQLVCKIFRVSWKDRDRDVIFL
SSLSAQFKQNPKEVFSDFKDLIGQILMEVLMMSTQTRDENPFASLTATSQPIAAAARSPD
RNLMLNTGSNSGTSPMFCNLGSFSASSLSSLGASGGASNWDSYSDHFTIETCKETDMLNY
LIECFDRVGIEEKKAPKMCSQPAVSQLLSNIRSQCISHTALVLQGSLTQPRSMQQPSFLV
PYMLCRNLPYGFIQELVRTTHQDEEVFKQIFIPILQGLALAAKECSLDSDYFKYPLMALG
ELCETKFGKTHPVCNLVASLPLWLPKSLSPGSGRELQRLSYLGAFFSFSVFAEDDVKVVE
KYFSGPAITLENTRVVSQSLQHYLELGRQELFKILHSVLLNGETREAALGYMAAVVNANI
KKAQMQTDDRLVSTDGFMLNFLWVLQQLSTKIKLETVDPTYIFHPRCRITLPNDETRVNA
TMEDVNDWLSELYGDQPPFSEPKFPTECFFLTLHAHHLSILPSCRRYIRRLRAIRELNRT
VEDLKNNESQWKDSPLATRHREMLKRCKTQLKKLVRCKACADAGLLDESFLRRCLNFYGL
LIQLLLRILDPAYPDITLPLNSDVPKVFAALPEFYVEDVAEFLFFIVQYSPQVLYEPCTQ
DIVMFLVVMLCNQNYIRNPYLVAKLVEVMFMTNPAVQPRTQKFFEMIENHPLSTKLLVPS
LMKFYTDVEHTGATSEFYDKFTIRYHISTIFKSLWQNIAHHGTFMEEFNSGKQFVRYINM
LINDTTFLLDESLESLKRIHEVQEEMKNKEQWDQLPRDQQQARQSQLAQDERVSRSYLAL
ATETVDMFHILTKQVQKPFLRPELGPRLAAMLNFNLQQLCGPKCRDLKVENPEKYGFEPK
KLLDQLTDIYLQLDCARFAKAIADDQRSYSKELFEEVISKMRKAGIKSTIAIEKFKLLAE
KVEEIVAKNARAEIDYSDAPDEFRDPLMDTLMTDPVRLPSGTIMDRSIILRHLLNSPTDP
FNRQTLTESMLEPVPELKEQIQAWMREKQSSDH
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atggaggagctcagcgctgacgagattcggcggaggcgtctggcgcgacttgctggtgga
cagacttcccagccaactaccccacttacctctccccagagggagaaccctcctgggcct
ccaatagcagcatcagctccaggcccttcccagagtcttggtctcaatgtccacaacatg
accccagctacctccccgataggtgcagcaggagtcgcccatcggagccagagcagtgag
ggagttagttctctcagcagctcaccttccaacagccttgagacgcaatctcagtccctc
tcacgttcccagagcatggatatcgatggtgtctcttgtgagaaaagcatgtcccaggtg
gatgtggattcaggaattgaaaatatggaggttgatgaaaacgaccgaagagaaaaaagg
agcctcagcgacaaggagccttcttcaggccctgaagtatccgaagagcaggccttacag
ctggtctgtaagatctttcgtgtctcttggaaggaccgggacagagatgtcatctttctt
tcttctctttctgctcagtttaagcagaacccaaaggaagtgttctctgactttaaggat
ttgattggccagattttaatggaagtgctaatgatgtccactcagactcgagatgaaaat
ccatttgccagtctgacagccacgtcacagcccattgcagctgcagcgcggtcaccagat
agaaatctcatgctgaacactggctccaattcgggaacaagccccatgttctgcaacttg
ggatccttcagtgccagctcattatctagtttgggagcctctggtggagcaagtaattgg
gattcctacagtgaccatttcaccattgaaacctgcaaggagacagatatgctgaactac
ctcatcgaatgctttgaccgagttggaatagaagaaaaaaaagcaccaaagatgtgcagc
cagccagcagtcagccagctcctgagcaacatccgctcacaatgcatatcgcacaccgca
ttagtactccaaggttccctaacacagcctagatccatgcagcagccgtccttccttgtg
ccctacatgctgtgcaggaatctcccatacggcttcattcaagaactggtgaggaccact
catcaggatgaagaagtgttcaagcagatctttattcccattttacaaggcctggctctt
gctgccaaagagtgctcacttgatagtgactactttaaatacccccttatggcattaggt
gaactctgtgaaactaagtttggaaagacacaccctgtgtgtaatttggttgcctctttg
cccttgtggttgccgaagtccttaagccctggctccgggagggagctgcagagactgtct
tacctgggggccttctttagcttctcagtctttgcagaagatgatgttaaagtggtggaa
aaatatttctcaggtcctgccattaccctggaaaacacccgtgtggtcagccaatcacta
cagcattacttggagttgggaaggcaagagcttttcaagattctgcatagtgttctgttg
aatggtgaaacccgtgaagctgccctgggttacatggcagctgttgtcaatgccaatata
aagaaagcacagatgcagacagatgatagattggtatctacagatggatttatgctcaat
ttcctttgggtactacagcagctaagtacaaaaatcaagttagaaacagttgatcccaca
tatatattccacccaagatgtcggattacactccccaatgatgagacgcgagtgaatgca
acaatggaggatgtgaacgactggctgagtgaactttatggagaccagcctccattttct
gagccaaaattccccacagaatgcttctttctcaccctacatgcccaccacctctctatt
ctgcccagttgtcgtcgctacatccgcagactccgcgccatccgggagcttaataggact
gtggaagatttgaaaaataatgaaagccagtggaaagattctcccctggcaactagacat
cgtgaaatgttgaaacgctgtaaaactcagctgaagaaactggtacggtgcaaggcctgt
gctgacgctggcttacttgacgagagcttcctgagaagatgtctgaatttttatggcctt
ctcattcagctgctgctccgcatcctggaccctgcataccccgacataacactgccttta
aattcagatgtccccaaggtatttgcagcgttgcctgagttttatgtagaagatgttgct
gaatttttattttttattgttcaatactctcctcaggtgctttatgagccctgtactcag
gatattgtgatgttcctcgttgtgatgttgtgcaaccagaactacatccggaatccatac
ctagtggccaaactggtagaagttatgtttatgaccaaccctgctgtccagccacgaacc
cagaaattttttgagatgattgagaaccatcctctctctaccaaattactggtaccttct
ctgatgaagttctatacagatgtggagcacactggagctaccagcgagttctatgacaag
ttcacaatccgctatcacattagtaccatttttaaaagcctttggcaaaacatcgctcac
catggcacctttatggaggagttcaattctgggaagcagttcgtgcgctacataaacatg
ttgataaacgatacgacgtttttgctcgatgaaagtctggagtcgctgaagaggatccat
gaagtgcaagaagagatgaagaacaaagagcagtgggaccagctgcctcgggatcagcag
caggcccggcagtctcagcttgctcaggatgagcgcgtttcacgctcttacctcgcgttg
gcaacagaaaccgtagatatgttccacatcctcacgaagcaggtccagaagccattcctc
agaccagaacttggaccccgattggctgcgatgctgaactttaatctacagcagctctgt
ggccccaagtgtcgtgacttgaaggtggagaacccagagaagtatggctttgaacccaag
aagctgttggaccaactgacagatatttacctgcagctggactgtgctcggtttgcgaag
gccattgccgacgaccagagatcctacagcaaggaactgtttgaagaagtaatttccaag
atgcggaaggcagggattaaatccacaatagcaatagagaagtttaagcttcttgccgag
aaagtagaggagatagtggccaagaacgcccgggcagaaatcgactacagtgatgctccg
gatgagttcagagaccctctgatggacaccctgatgactgaccccgtgcggctgccctct
ggcaccatcatggaccgctccatcatcctgcggcacctgctgaactctcccactgacccc
ttcaaccgccagacactgacagagagcatgctggaaccagtgccagaactgaaagaacag
atccaggcatggatgagagagaagcagagcagcgatcactaa
DBGET
integrated database retrieval system
