KEGG   Dipodomys merriami (Merriam's kangaroo rat): 138838186
Entry
138838186         CDS       T11079                                 
Symbol
Plod1
Name
(RefSeq) procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 isoform X1
  KO
K00473  procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 [EC:1.14.11.4]
Organism
dmer  Dipodomys merriami (Merriam's kangaroo rat)
Pathway
dmer00310  Lysine degradation
dmer01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:dmer00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00310 Lysine degradation
    138838186 (Plod1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:dmer04147]
    138838186 (Plod1)
Enzymes [BR:dmer01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.4  procollagen-lysine 5-dioxygenase
     138838186 (Plod1)
Exosome [BR:dmer04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   138838186 (Plod1)
SSDB
Motif
Pfam: 2OG-FeII_Oxy Anp1 2OG-FeII_Oxy_3
Other DBs
NCBI-GeneID: 138838186
NCBI-ProteinID: XP_069893491
LinkDB
Position
Unknown
AA seq 742 aa
MRAPLLLAPLGWLLLVHAKDGAKPEDQPRRETAAAHDETQTDNLLVLTVATKETEGFRRF
KRSAQFFNYKIQALGLGEDWNVEKTSAGGGQKVRLLKKALEKLADKKDLVILFTDSYDVV
FASGPRELLKKFRQAKSQVVFSAEELIYPDRRLEVKYPVAPDGKRFLGSGGFIGYAPNLS
KMVAEWDGQDSDSDQLFYTKIFLDPEKREQINITLDHRCRIFQNLDGALDEVVLKFEMGH
VRARNLAYDTLPVLIHGNGPTKLQLNYLGNYIPRFWTFETGCTVCEEGLRSLRGIGDEAL
PVVLVGVFIEQPTPFLSLFFQRLLRLHYPRKQMRLFIHNHEKHHRAQVEQFLAEHGGEYQ
SVKLVGPEVRMANADARNMGADLCRQDLTCTYYFSVDADVALTEADSLRLLIEQNKNVIA
PLLTRHGRLWSNFWGALSADGYYARSEDYVDIVQGRRVGVWNVPYISNIYLIKGSALRAE
LQHSDLFHHSKLDADMAFCANIRQQEVFMFLTNRHPFGHLLSLDNYQTTHLHNDLWEVFS
NPEDWKEKYIHENYTKALEGKLVETPCPDVYWFPIFTEAACDELVEEMEHYGQWSLGDNK
DNRIQGGYENVPTIDIHMNQINFEREWHKFLMEYIAPLTEKLYPGYYTRAQFDLAFVVRY
KPDEQPSLMPHHDASTFTINIALNRVGEDYEGGGCRFLRYNCSIRAPRKGWALMHPGRLT
HYHEGLPTTRGTRYIAVSFVDP
NT seq 2229 nt   +upstreamnt  +downstreamnt
atgagggctccgctgctcctggccccgctgggctggctgctcctggtccacgccaaggac
ggcgccaagcccgaggaccaacccaggagagaaaccgcagctgcccatgatgaaacccag
acagataaccttttagttctcaccgtggctaccaaggagacggaggggtttcgtcgcttc
aagcgctctgcccagttctttaactacaagatccaggcactgggcttgggggaggactgg
aatgtggagaaaacgtcagcaggtggtgggcagaaggttcggctgctgaagaaagctctg
gagaaacttgcagacaagaaggacctggtcattctcttcacagacagctatgatgtggtc
tttgcttcggggcctcgcgagctcctgaaaaagttccggcaggccaagagccaggtggtg
ttctctgctgaggaactcatctacccagatcgtaggctggaggtcaagtacccggtggcc
cctgatggcaagaggttcctgggctctggaggcttcattggttatgcccctaacctcagc
aaaatggtggctgaatgggatggccaggacagtgacagtgaccagctcttctataccaag
atcttcttggacccagagaagagggagcagatcaatatcacactggaccatcgctgccgg
atcttccagaacctggacggggccttggatgaagtggtactcaagtttgaaatgggccac
gtgagagcacggaacctggcctacgacactctcccagtcctgatccatggcaacgggccc
accaagctacagctgaactacctgggcaactacatcccacgcttctggaccttcgagaca
ggctgcaccgtgtgtgaggagggtctgcgcagcctcaggggcattggggatgaagccctg
cccgtggtcctggtcggtgtgttcattgagcagcccacgccgttcctgtccctgtttttc
cagcggctcctgcgactccactaccctcggaaacagatgcggcttttcattcacaaccat
gagaagcaccacagggcccaggtggagcagttcctggcagagcatgggggcgagtaccag
tctgtgaaactggtgggtcccgaggtgcggatggcaaacgcggacgccaggaacatgggc
gcagacctctgccgccaggacctgacctgcacctactacttcagcgtggatgccgacgtg
gccctgacagaggcagacagcctgaggctgctgattgagcagaacaagaatgtcatcgcc
ccactcttaacccgccatgggagactctggtccaacttctggggggcattgagtgcggac
ggctactatgcccgctctgaggactacgtggacatcgtgcagggccgaagagtcggggta
tggaatgtgccctacatctccaacatctacctgatcaagggcagtgccctgcgggccgag
ctgcagcacagcgacctgttccaccatagcaagctggatgccgacatggccttctgtgcc
aacatccggcagcaggaagtgttcatgttcctgaccaaccggcatcccttcggccacctc
ctctccctggataactaccagaccacccatctgcacaacgatctttgggaggtgttcagc
aaccctgaggactggaaagaaaagtacatccatgagaattacaccaaagccctggagggg
aagctggtggagacgccctgcccagatgtctactggttccccatcttcacggaggcagcc
tgtgatgagctggtagaagagatggagcactatggccagtggtccctgggcgacaacaag
gacaaccggatccagggtggctatgaaaatgtgcctaccatcgacatccacatgaatcag
atcaacttcgagcgggagtggcacaagttcctgatggagtacattgctcccctgacggag
aagctctacccagggtactacaccagggcccagtttgacttggccttcgttgtccgatac
aagccggatgaacagccctccctgatgccacaccatgatgcctccaccttcaccatcaat
atcgccctgaacagggtcggggaggactatgagggtggtggctgtcgcttcctgcgttac
aactgctccatccgagccccacggaaaggctgggccctcatgcacccaggacggctcact
cactaccacgagggactccccaccacccggggtacccgctacatcgccgtgtcctttgtg
gatccctaa

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