Dipodomys merriami (Merriam's kangaroo rat): 138838803
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Entry
138838803 CDS
T11079
Symbol
Zc3h12c
Name
(RefSeq) probable ribonuclease ZC3H12C isoform X1
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
dmer Dipodomys merriami (Merriam's kangaroo rat)
Brite
KEGG Orthology (KO) [BR:
dmer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dmer03019
]
138838803 (Zc3h12c)
Messenger RNA biogenesis [BR:
dmer03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
138838803 (Zc3h12c)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_Zc3h12a
Regnase_1_C
UBA_6
UBA_N4BP1_C
zf-CCCH_2
zf-CCCH_4
Motif
Other DBs
NCBI-GeneID:
138838803
NCBI-ProteinID:
XP_069894244
LinkDB
All DBs
Position
Unknown
AA seq
884 aa
AA seq
DB search
MSLYFPAKEYGVLCLQEFRNNSKVESSPCNSFMGLKDLLGHDLGHLYVESTDPSSSAAAP
WPMVEKTAMDGIHAGEEERGRSEEHASSGDSEGSTHSDHEPEQQKTISVEPCVLTKAHRQ
LCRSPCLEPHLLKRSEILQDFKPEDAQTPSKEVKKPPDVVREYQTKLEFALKLGYSEEQV
QLVLNKLGTDALINDILGELVKLGNKSETDQTVSPMNSVMREVSSLESQRSESPMQEIVA
DDGENLRPIVIDGSNVAMSHGNKEVFSCRGIKLAVDWFLDRGHKDITVFVPAWRKEQSRP
DAVITDQEILRKLEKEKILVFTPSRRVQGRRVVCYDDRFIVKLAFESDGIIVSNDNYRDL
ANEKPEWKKFIDERLLMYSFVNDKFMPPDDPLGRHGPSLDNFLRKKPIAPEHKKQPCPYG
KKCTYGHKCKYYHPERGSQPQRSVADELRAMSRNTAAKTATEGGLVKSNSVPCSTKTDST
SDVKRGAPKRQSDPSIRTQVYQDLEEKLPTKNKLETRSVPSLVSIPAPSTTKPQSTTSLS
NGLPSGVHFPPQDQRPQGQYPPMMMATKNHGTPMPYEQYPKCDSPVDMGYYSMLNAYSNL
SISGPRSPERRFSLDTDYRVSSVASDCSSEGSMSCGSSDSYAGYNDRSYVSSPDPQLEES
LKCQHMHPHSRLNSQPFVQNFHDPLTRVQSYSHEEPKFHHKPPLPHLAMHLQHPAVGARS
SCPGDYPSPPSSTHSKAPHLGRSLVATRIDSISDSRLYDSSPSRQRKPYSRQEGLGGWDR
PSYGMDAYGYRQTYSLPDNSTPPCYEQFTFQSLPEQPEPTWRVPYCGMPPDAPRYQDNRE
KIYINLCNIFPPDLVRLVMKRNPHMTDAQQLAAAILVEKSQLGY
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
atgtctttgtatttccctgctaaggaatacggggtgctctgccttcaggaattcagaaac
aacagcaaagtcgagtcgagtccatgtaacagcttcatgggtctgaaggatctcctgggg
catgaccttggccatctctatgtggaaagcactgacccaagttcaagtgcagcagcccct
tggccaatggtagaaaagacggcgatggatggcatccatgctggggaggaggagaggggg
cgatccgaagagcacgcgagctctggggactctgagggaagcacgcattctgatcatgag
cctgagcagcagaagaccatttccgtagagccgtgcgtactcaccaaggctcacaggcag
ttgtgccggtccccgtgcttagagccacacctcctcaaacgcagtgagattttgcaagac
ttcaaaccggaggatgcccagactccatccaaggaagtgaagaaacccccagatgtcgtt
cgagaataccaaacgaaactggagtttgcactgaagttaggttattccgaagaacaggtt
caacttgtgctcaacaaacttggtaccgatgctttaatcaatgatattttgggagaactc
gtcaagcttggaaataaaagcgagacagatcagaccgtgagtccaatgaatagtgtcatg
cgggaagtgtcatctctagagtcccagaggtccgagtcacccatgcaggagattgtggcg
gatgatggtgaaaatctgaggcccatcgttattgatggcagcaatgtagcaatgagccat
ggaaacaaagaagtcttttcctgccgaggaataaaactggcagtggattggtttttggac
agaggccacaaagatatcactgtttttgttcctgcctggaggaaagagcagtcgcgccct
gatgctgtcatcacagatcaggaaatcttgcgcaaattagagaaggagaagatcctggtg
ttcacgccatcacggcgcgtccaagggaggcgcgtggtttgctacgatgacaggttcatc
gtgaagctggcgtttgagtcagacggcatcattgtatccaatgacaactacagggatttg
gccaatgagaaaccagaatggaagaagttcatagatgagcggttattgatgtattccttc
gtcaatgacaagttcatgcctccggatgatcctctgggcagacatggcccaagcctggac
aacttcctgagaaagaaacccattgctcctgaacacaaaaagcagccttgtccttatgga
aagaagtgtacctatgggcacaagtgcaaatattaccatccggaaaggggcagtcagcct
cagcggtcagtagctgatgaacttcgtgccatgtctagaaacacagcagccaaaactgcc
accgaaggagggctggtgaaaagcaacagcgtcccttgtagcacaaagacggacagcact
tccgacgtgaagcgaggggctccaaagaggcaatccgatccaagcataaggactcaagtc
taccaagacctagaagaaaagcttcccaccaaaaacaagttggaaaccaggtccgtacct
tccttagttagcattccggctccttctactacaaaaccccaaagcactacatctttaagc
aatggccttccatctggagtgcatttcccacctcaggatcaaagaccacagggacaatat
cctccaatgatgatggcaaccaaaaatcatggaacgccaatgccttatgaacagtacccc
aaatgtgactcgcccgttgacatggggtattattccatgttgaatgcgtattcaaatctg
agtatctcaggcccacgaagtcctgaaaggcgtttctcgttagacacagattaccgagtc
agttctgtggcttctgactgcagcagtgaagggagcatgagctgtgggagcagtgactct
tatgcggggtacaatgaccgctcctacgtcagctctcccgacccgcagctggaagagagt
ttgaagtgtcaacacatgcaccctcacagccgccttaattcccagcccttcgtgcagaat
ttccacgaccccttaaccagagtgcagagttacagtcatgaagaaccaaagttccatcac
aagcctcctcttccacatctggcaatgcatctgcagcacccagctgtgggcgcccggtcc
agctgtcccggggattacccctcgccaccaagttccacccactccaaggcgccgcaccta
gggaggtctttggtggccacaagaatagacagcatttctgattctcgactctatgacagc
tctccttccagacaaagaaagccttactcccgccaggaggggctgggaggctgggatagg
ccgagttatgggatggatgcctatgggtatcggcagacttactccttacctgataactcc
acaccgccctgctatgaacagttcaccttccagagcctacctgagcagccagagcccacc
tggcgagtcccatactgtggaatgccaccagacgctcccaggtaccaggacaaccgagag
aagatttatatcaacttgtgcaacatcttcccacccgaccttgtgagacttgtcatgaaa
aggaatcctcacatgacagatgcccagcagctggctgcagctattttagtggagaaatcc
cagctgggttattga
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