Dipodomys merriami (Merriam's kangaroo rat): 138839836
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Entry
138839836 CDS
T11079
Symbol
Arid2
Name
(RefSeq) AT-rich interactive domain-containing protein 2 isoform X1
KO
K11765
AT-rich interactive domain-containing protein 2
Organism
dmer Dipodomys merriami (Merriam's kangaroo rat)
Pathway
dmer03082
ATP-dependent chromatin remodeling
dmer05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
dmer00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
138839836 (Arid2)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
138839836 (Arid2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dmer03000
]
138839836 (Arid2)
03021 Transcription machinery [BR:
dmer03021
]
138839836 (Arid2)
03036 Chromosome and associated proteins [BR:
dmer03036
]
138839836 (Arid2)
Transcription factors [BR:
dmer03000
]
Eukaryotic type
Helix-turn-helix
ARID
138839836 (Arid2)
Transcription machinery [BR:
dmer03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
138839836 (Arid2)
Chromosome and associated proteins [BR:
dmer03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
138839836 (Arid2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ARID
RFX_DNA_binding
FOXP-CC
TSTD2_N
Motif
Other DBs
NCBI-GeneID:
138839836
NCBI-ProteinID:
XP_069895456
LinkDB
All DBs
Position
Unknown
AA seq
1848 aa
AA seq
DB search
MTEPRRRRRRPRNGLRALAPPDERRKGLAFLDELRQFHHSRGSPFKKIPAVGGKELDLHG
LYTRVTTLGGFAKVSEKNQWGEIVEEFNFPRSCSNAAFALKQYYLRYLEKYEKVHHFGED
DDEVPPGNPKPQLPIGAIPSSYNYQQHSVSDYLRQSYGLSMDFNSPNDYNKLVLSLLSGL
PNEVDFAINVCTLLSNESKHVMQLEKDPKIITLLLANAGVFDDTLGSFSTVFGEEWKEKT
DRDFVKFWKDIVDDTEVRDLISDRNKSHEGTSGEWIWESLFHPPRKLGINDIEGQRVLQI
AVILRNLSFEEGNVKLLAANRTCLRFLLLSAHSHFISLRQLGLDTLGNIAAELLLDPVDF
KTTHLMFHTVTKCLMSRDRFLKMRGMEILGNLCKAEDNGVLICEYVDQDSYREIICHLTL
PDVLLVISTLEVLYMLTEMGDVACTKIAKVEKSIDMLVCLVSMDIQMFGPDALAAVKLVE
HPSSNHQVLSDIRPQAIEQVQTQTHVASAPASRAVVAQHVAPPPGIVEIDSEKFACQWLN
AHFEVNPDCSVSRAEMYSEYLSTCSKLARGGILTSTGFYKCLRTVFPNHSVKRVEDSSNN
GQAHIHVVGVKRRAIPLPIQMYYQQQPISTPVVRVDSVPDLSPTPSPAGLPHGSQTVGNH
FQRAPVPNQSSSLTATQMSFPVQGVHTVAQTVSRIPPNPSVHAHQQQNAPVTVIQNKAPI
PCEVVKATVIQNSIPQTAVPVSIAVGGGPVQNSVVQNHSTGPQPVTVMNSQTLLHHPPVI
PQPSSLHTVVPGQIPSGTPVTVIQQTVPQSHIFGRVQNIPACTSTVSQGQQLITTSPQPV
QPSSQQASAGSQPQDTVIIAPPQYVTTSASNIVSATSVQNFQVATGQMVTIAGVPSPQPS
RVGFQNIAPKPLPSQQVPSTVVQQPIQQPQQPTQQSVVIVSQPAQQGQTYAPAIHQIVLA
NPAALPAGQTVQLTGQPNITPSSSPSPVPATNNQVPTAMPSSSTPQSQGPPPTVSQMLSV
KRQQQQQHSPAPPPQQVQVQVQQPPQVQMQVQPQQTNAGVGQPASGESSLIKQLLLPKRG
PSTPGGKLILPAPQIPPPNNARAPSPQVVYQVANNQAAGFGVQGQPPAQQLLVGQQNVQL
VQSGMPSTGGVQTVPISNLQILPGPLISNSPATIFQGTSGNQVTITVVPNTSFATATVSQ
GNATQLIAPAGITVSGTQAGVGLQVQTLPATQASPAGQSQSSCTIATPPFKGDKIICQKE
EEAKEATGLHVHERKIEVMENPSCRRGATNTSNGDTKESEMQVGSLLNGKKYSDSSLPPS
NSGKTQSETSQCSLISNGPSLELGENGASGKQNLEQMDMQDIKSDLKKPLVNGICDFDKG
DGSHLSKNIPNHKTSNHVGNGEISPTELQGTLDATQQDTAKGDQLERISNGPVLTLAGSP
SLSSIQEASSVAAQQFSGTDLPNGPLASSLNSDVPQQRPSVVVSPHSTTSVIQGHQIIAV
PHSGSRVPHSAPSSDVRSTNGTAECKTAKRPAEENDRETVTGIPNKVGVRIVTISDPNNA
SCSATMVAVPAGADPSTVAKVAIESAVQQKQQHPPPYIQNVVPQNTPLPPSPAVQVQGPP
SSSQPSPLSVSSQHAEPMRKPGQNFMCLWQSCKKWFQTPSQVFYHAATEHGGKDVYPGQC
LWEGCEPFQRQRFSFITHLQDKHCSKDALLAGLKQDEPGQAGNQKSSTKPPAVGGAGSTP
RAQKAIVNHPSAALMALRRGSRNLVFRDFTDEKEGPITKHIRLTAALILKNIGKYSECGR
RLLKRHENNLSVLAISNMEASSTLAKCLYELNFTVQSKEQEKDSEMLQ
NT seq
5547 nt
NT seq
+upstream
nt +downstream
nt
atgactgagccccgccgccgccgccgccggccgaggaatgggctccgggctctggcgcct
ccggacgagcggagaaagggactcgctttcctggacgagctgcggcagttccaccacagc
agagggtcgccttttaaaaaaatccctgcggtgggtgggaaggagctggatctccacggg
ctctacaccagagtcactactttaggcggattcgcgaaggtttctgagaagaatcagtgg
ggagaaattgttgaagagttcaactttcccagaagttgttctaacgctgcctttgcttta
aaacagtattacttgcgttatctagaaaagtacgagaaagttcatcattttggggaagat
gatgatgaggtaccacccggcaacccaaagccacagcttcctattggtgcaattccatct
tcctacaattaccagcaacacagtgtgtcagattatctgcgtcaaagctatgggctatca
atggactttaattcgccaaacgactataataaattggtgctttcactgttatctggactc
ccaaatgaagtggactttgcaattaatgtatgcactctcctatcaaatgaaagcaagcac
gtcatgcaacttgaaaaagaccctaaaatcatcactttattacttgctaatgctggggta
tttgatgacactttaggatccttttctactgtatttggagaagaatggaaagagaagact
gatagagattttgttaagttttggaaagacattgttgatgatactgaagtacgtgacctc
atttctgacagaaacaaatctcatgaaggtacatcaggagagtggatttgggaatcttta
tttcatccgcctcgaaagctgggcattaatgatattgaaggacagcgggtacttcagatt
gcagtgattttgcgaaatctttcctttgaggagggaaatgttaagctcttggcagctaat
cgtacctgtcttcgtttcctgttactttctgcacatagtcattttatttctttaaggcaa
ttaggccttgacacattaggaaatattgcagcagagcttttattggaccctgttgatttc
aaaactacacacctgatgtttcatactgtcacaaaatgtctaatgtcaagggatagattt
ttaaaaatgaggggcatggaaattttggggaatctttgcaaggcagaagataatggtgtt
ttaatttgtgaatatgtggatcaagattcatacagagagatcatttgtcatctcacttta
cctgacgtgctgcttgtaatctcaacgctcgaggtgctatacatgctcactgaaatggga
gatgttgcttgcacaaaaattgcaaaagtagaaaagagcatagacatgttagtatgtctg
gtttctatggatattcagatgtttggccctgatgcactagctgcagtaaaactcgtcgaa
catccaagttccaatcatcaagttttatctgacattaggccacaagctatagagcaagtc
caaacccagacccatgtagcatctgccccagcttccagagcagttgtagcacagcatgtt
gctccacctccaggaatagtggaaatagatagtgagaagtttgcttgtcagtggctaaat
gctcactttgaagtaaatccagattgttctgtctctcgagcagaaatgtattctgaatac
ctctcaacttgtagtaaattagctcgtggtggaatcctcacgtcaactggattttacaaa
tgtcttagaacagtctttccaaatcattcagtgaagagagtggaggattccagtaacaat
gggcaggcacatattcacgtggtaggcgtgaaacggagggctatcccacttcccatccag
atgtactatcagcagcagccaatttctactcctgtcgtccgtgttgattcggttcctgat
ttatctccaactccttcacctgcgggactccctcatggatcacaaactgtaggaaatcat
tttcagcgggctccggttcccaaccaatcttcaagtttgacggcgacacaaatgtctttt
ccagtacaaggtgttcatactgtggcgcagactgtttccagaattccaccaaatccttca
gttcatgcacaccagcagcaaaatgctccagtgactgtcattcagaataaagctccaatt
ccttgtgaggttgttaaggcgacagtaatccagaattctataccccagacagcagttcct
gtgagcattgctgtcggaggaggacctgtgcagaattctgtggttcagaatcacagtact
gggccacaacctgttacagttatgaattctcagacattgcttcaccatccacctgtaatt
ccacaaccatcttcattacacacagtggtgccagggcagattccttcaggcactcctgtt
acagtaattcagcaaactgtcccacagagtcatatatttggcagagtacagaacatacca
gcatgtacatctacagtttcacaaggtcaacagttaatcaccacatcaccacaacctgtg
cagccgtcatctcagcaagcatcagctggtagccagccgcaagacactgttatcatagca
cccccacagtacgtaacaacttctgcctccaatattgtctctgcaacttctgtacagaat
tttcaggtagctacagggcaaatggttactattgctggtgttcccagtccacaaccatca
agagtaggattccagaacattgcaccaaaacccctcccttcccaacaagttccatccaca
gtggtacagcagcccattcaacagccacagcagccaacccaacaaagtgtagtgatcgtg
agtcagccagctcaacaaggtcagacatacgcaccagccattcaccaaatagttcttgct
aacccagcagccctgcccgctggccagacagttcagttaactggacaaccaaacataact
ccctcttcttccccgtcgcctgtcccagctacgaataaccaagttcctactgccatgcca
tcttcatccactcctcagtcgcagggcccacctcctactgtcagtcaaatgctatctgtg
aaaagacagcagcagcagcagcattcaccagcaccaccaccgcagcaggtccaggtccaa
gttcagcagccaccacaagtacaaatgcaagtgcagcctcagcaaacaaatgctggagtt
ggtcagcctgcttctggtgagtcgagtttgatcaaacagctgctgcttccaaagcgtggc
ccttccaccccgggtggtaagctgattctcccagctccacagattccaccccctaataat
gcaagagctcccagccctcaggtggtgtatcaggtggccaacaaccaagcagctggtttt
ggagtgcagggacaacctccagctcagcagctattggttggacagcaaaacgtgcagttg
gtccaaagtggaatgccatccacagggggagtgcagactgtgcccatttcgaacttacaa
atattgccaggcccactgatctccaatagcccagcaaccattttccaagggacttctggc
aaccaggtaaccataacagttgtgccaaatacaagttttgcaactgcaactgtgagtcag
ggaaatgcaactcagctcattgctccagcaggtattaccgtgagcggaacccaggcagga
gttggacttcaggtgcaaacgcttccagccactcaagcgtctccagctggacaatcacaa
tcatcgtgtaccattgctactcccccattcaaaggtgataaaataatttgccaaaaggag
gaggaggcaaaggaagcaacaggtttacacgttcacgaacgtaaaatcgaagtcatggag
aacccgtcatgccgacgaggagccacaaacaccagcaatggggacacaaaagaaagtgaa
atgcaggtgggaagccttttaaatgggaaaaagtacagtgactcaagtctacctccttca
aactcagggaaaactcaaagtgagaccagtcagtgctcactaatcagtaatgggccatca
ttagaactaggtgagaacggagcatctggaaaacagaatttggaacaaatggacatgcag
gatatcaaaagtgatttgaaaaaaccccttgttaatggaatctgtgattttgataaagga
gatggttctcatttaagcaaaaacattccaaatcacaaaacttccaatcatgtaggaaat
ggtgagatctctccaacggagttacaaggaactttagatgccactcagcaagatactgcc
aaaggtgatcaactagaaagaatttctaatggacctgtattgactttggctggttcacca
tctctgagcagtatacaggaagcttcaagtgtggccgcacagcaatttagtggtactgat
ttgcctaatggacctctagcttcaagtttgaattcagatgtgcctcagcaacgcccaagt
gtagttgtttcaccacattctacaacctctgttatacaggggcatcaaatcatagcagtt
ccccactcaggatcaagagtgccccattcggccccatcgtctgatgtgcggtctacaaat
ggcacagcagaatgcaaaactgcaaagaggccagcagaggagaacgatagggaaacagtc
acaggaattccaaataaagtaggagtgagaattgttacaatcagtgaccccaacaacgcc
agctgtagtgctaccatggttgctgtgccagcaggagcagatccaagcactgtagctaaa
gtagcaatagaaagtgctgttcagcaaaagcagcagcatccaccaccgtacatacagaat
gtggtcccacagaacactcctctgccaccttcaccagctgtgcaagtgcagggcccgcct
agcagttcccagccgtctccactcagtgtgtccagtcaacatgcagagccaatgagaaaa
cccggccagaacttcatgtgtctgtggcagtcttgtaaaaagtggtttcagacaccttca
caggttttctaccatgcagctactgaacacggaggaaaagacgtgtacccagggcagtgt
ctttgggaaggctgtgagccttttcagcggcagcggttttcttttattacacacttacag
gataaacactgttcaaaggatgccctgcttgcgggattaaaacaagatgaaccaggacaa
gcaggaaatcagaaatcttctaccaagccaccggctgtagggggcgcaggctccaccccg
agggcacagaaggccattgtgaaccatcccagcgctgccctcatggctctcaggagagga
tcgaggaacctcgtctttcgggatttcacagatgaaaaagagggaccaataactaaacac
atccgactaacagctgccttaatactaaaaaatattggtaaatactcagaatgtggtcgc
agattgttaaagagacacgaaaacaacttatcagtgctagccattagtaacatggaagcc
tcctccacccttgccaaatgcctttatgaacttaattttacagttcagagtaaagaacaa
gaaaaagactcggaaatgctgcagtga
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