Dipodomys merriami (Merriam's kangaroo rat): 138840089
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Entry
138840089 CDS
T11079
Symbol
Cul4b
Name
(RefSeq) cullin-4B isoform X1
KO
K10609
cullin 4
Organism
dmer Dipodomys merriami (Merriam's kangaroo rat)
Pathway
dmer03420
Nucleotide excision repair
dmer04120
Ubiquitin mediated proteolysis
dmer05170
Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:
dmer00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
138840089 (Cul4b)
09124 Replication and repair
03420 Nucleotide excision repair
138840089 (Cul4b)
09160 Human Diseases
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
138840089 (Cul4b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dmer04121
]
138840089 (Cul4b)
03400 DNA repair and recombination proteins [BR:
dmer03400
]
138840089 (Cul4b)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dmer04147
]
138840089 (Cul4b)
Ubiquitin system [BR:
dmer04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Cullin
138840089 (Cul4b)
DNA repair and recombination proteins [BR:
dmer03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
138840089 (Cul4b)
TCR (transcription coupled repair) factors
Cul4-CSA complex
138840089 (Cul4b)
Exosome [BR:
dmer04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
138840089 (Cul4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
SecA_SW
Motif
Other DBs
NCBI-GeneID:
138840089
NCBI-ProteinID:
XP_069895893
LinkDB
All DBs
Position
Unknown
AA seq
934 aa
AA seq
DB search
MIQQSHFGAFTQMFTNKTKATSTTIFIGALFTIGFSSPNPSAAAAAQEVRSATDGNTSTT
PPTSAKKRKLNSSSSSSSTSSSSSTNSSNEREDFDCSSSFSSIPPLQPRDSASPSTSSFC
LGVSVASSSHIPIQKKLRFEDTLEFVGFDAKMAEESSSSSSSSSPTAATSQQQQLKNKSI
LISSMTSVHHANGLAKSSTTVSSFANSKPGSAKKLVIKNFKDKPKLPENYTDETWQKLKE
AVEAIQNSTSIKYNLEELYQAVENLCSYKISANLYKQLRQICEDHIKAQIHQFRDMDSLD
SVLFLKKIDRCWQNHCRQMIMIRSIFLFLDRTYVLQNSMLPSIWDMGLELFRAHIISDQK
VQNKTIDGILLLIERERNGEAIDRSLLRSLLSMLSDLQIYQDSFEQRFLEETNRLYAAEG
QKLMQEREVPEYLHHVNKRLEEEADRLITYLDQTTQKSLIATVEKQLLGEHLTAILQKGL
NNLLDENRIQDLSLLYQLFSRVRGGVQVLLQQWIEYIKAFGSTIVINPEKDKTMVQELLD
FKDKVDHIIDICFLKNEKFINAMKEAFETFINKRPNKPAELIAKYVDSKLRAGNKEATDE
ELEKMLDKIMIIFRFIYGKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAF
TSKLEGMFKDMELSKDIMIQFKQVKYMQNQNVPGNIELTVNILTMGYWPTYVPMEVHLPP
EMVKLQEIFKTFYLGKHSGRKLQWQSTLGHCVLKAEFKEGKKELQVSLFQTLVLLMFNEG
EEFSLEEIKQATGIEDGELRRTLQSLACGKARVLAKNPKGKDIEDGDKFICNDDFKHKLF
RIKINQIQMKETVEEQASTTERVFQDRQYQIDAAIVRIMKMRKTLSHNLLVSEVYNQLKF
PVKPADLKKRIESLIDRDYMERDKENPNQYNYIA
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atgatccagcaatcccactttggggcatttacccaaatgtttacaaacaagactaaagct
accagcacaactatatttattggagcattatttactataggtttttcttcccccaatccc
tcagctgctgctgctgcacaggaggtcagatctgccactgatggtaataccagcactact
ccgcccacctctgccaagaagagaaagttaaacagcagcagcagcagtagcagcaccagc
agcagtagcagcactaatagtagtaacgagagagaagactttgattgctcctcttccttc
tcatccattcctcccttacaacccagggattcagcatccccttcaacctcctccttctgc
ctaggtgtttcagtggcttcttctagccacataccaatacagaagaagctacgttttgaa
gacaccctggagtttgtagggtttgatgcgaagatggctgaggaatcctcctcctcctcc
tcctcatcttcaccaactgctgctacatctcagcagcagcaacttaaaaataagagtata
ttaatttcttctatgacttcggtgcatcatgcaaacggcctagccaaatcttctaccacc
gtctctagttttgctaacagcaagcctggctctgctaagaagttagtgatcaagaacttt
aaagataagcctaaattaccagaaaactacacagatgaaacatggcagaaactgaaagaa
gcggtagaagctattcagaatagtacttcgattaagtacaatttagaagaactttaccag
gctgtagaaaatctttgttcttacaagatttctgcaaatttgtataaacagctgaggcag
atttgtgaagatcacatcaaagcgcagattcatcagttcagagatatggattcattggat
agtgttctttttctaaagaagattgacagatgctggcaaaaccactgtaggcaaatgata
atgattagaagcatttttttgtttctggatagaacttatgttcttcagaattcaatgcta
ccttccatttgggacatgggactagaattatttagggctcatattataagtgatcaaaaa
gtccagaataagacaattgatggcattcttctcttgattgagagggagaggaatggtgaa
gcaattgatagaagtttactccgaagccttttaagcatgctttctgatttgcaaatttat
caagattcttttgaacagcgatttttggaagaaactaacaggctctatgcagctgaaggc
caaaagttaatgcaagaaagagaggttcctgaatatcttcatcatgttaacaaacgtcta
gaagaagaagcagacagacttattacttacttagatcagaccacccagaaatcattaatt
gctactgttgaaaagcaacttctaggtgaacacttaacagcaattcttcagaaaggttta
aataaccttcttgatgaaaaccgaattcaagatttatctctcctatatcagctctttagc
cgagttcgaggtggagttcaggttctcttgcaacagtggattgaatacatcaaggccttt
gggagtactattgttattaatcctgaaaaagataaaaccatggttcaagaattgctggat
tttaaagataaagttgaccatataattgatatctgctttctgaagaatgaaaaatttatc
aatgccatgaaagaggcatttgaaacattcattaacaaaagaccaaataaacctgctgaa
cttatagctaagtatgtggactcaaagcttcgtgcaggaaacaaggaagctacagatgaa
gaacttgagaaaatgttggataaaatcatgatcatatttagatttatctatggcaaggat
gtttttgaggccttctataagaaagatttagccaaacgcctgttagttgggaagagtgca
tctgtagatgctgaaaaatcaatgctgtccaaacttaagcatgaatgtggagctgctttc
accagcaaacttgaaggaatgtttaaagacatggaactttctaaagacatcatgattcag
ttcaaacaggtaaaatatatgcagaatcagaatgttcctgggaatattgaattaactgtg
aatatcctgacaatgggttattggccaacatatgtgcctatggaagtccatttgccacca
gagatggtaaaactacaggaaattttcaagacattttacctaggtaaacacagtggcagg
aaactccagtggcaatcaacacttggacactgtgtgctaaaagcagaatttaaagagggt
aaaaaagaactccaagtgtctctttttcaaacactggtgctgctaatgttcaatgagggg
gaggagttcagtttagaagagatcaagcaggctactggaatagaggatggagagttaagg
agaacactgcaatcattagcttgtggcaaagctagagtcttggcaaaaaatccaaagggc
aaagacattgaagatggtgacaagttcatttgtaatgatgatttcaaacacaaacttttc
aggataaagatcaatcaaatccagatgaaagaaacggttgaagaacaagcaagtactaca
gaaagagtatttcaagatagacaatatcaaattgatgctgcaattgttcgaattatgaag
atgagaaagacacttagccataatcttcttgtttcagaagtatataaccagttaaaattt
ccagtaaagcctgctgatctaaagaagagaatagaatctttaattgatcgggactacatg
gaaagagataaagaaaatccaaatcagtacaactatattgcttag
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integrated database retrieval system
