Dipodomys merriami (Merriam's kangaroo rat): 138840226
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Entry
138840226 CDS
T11079
Symbol
Atrx
Name
(RefSeq) transcriptional regulator ATRX isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
dmer Dipodomys merriami (Merriam's kangaroo rat)
Pathway
dmer04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
dmer00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
138840226 (Atrx)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dmer03000
]
138840226 (Atrx)
03036 Chromosome and associated proteins [BR:
dmer03036
]
138840226 (Atrx)
Transcription factors [BR:
dmer03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
138840226 (Atrx)
Chromosome and associated proteins [BR:
dmer03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
138840226 (Atrx)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
ATRX_C
ADD_ATRX
Helicase_C
Motif
Other DBs
NCBI-GeneID:
138840226
NCBI-ProteinID:
XP_069896255
LinkDB
All DBs
Position
Unknown
AA seq
2483 aa
AA seq
DB search
MTAEPTSESKLNTLVQKLHDFLAHSSEESEETNSPPRLLTNQNIDKARVSGNNSDMMENN
KEEGTGSSEKFRSSGSSRSKRKPSIVTKYVESDDEKPLDESINEEVPNENSENDITMQSL
PKGTVIVQPEPVLNEDKDDFKGPEFRSRSKMKTENLKKRGEDGLHGIVTCTACGQQVNHF
QKDSIYRHPSLQVLICKNCFKYYMSDDISRDSDGMDEQCRWCAEGGNLICCDFCHNAFCK
KCILRNLGRKELSTIMDENNQWYCYICHPEPLLDLVTACNSVFENLEQLLQQNKKKIKVD
NEKSSKICDHTPKFSPKKISSSCNGEEKKLDDSCSGSITYSYSALIVPKEMIKKAKKLIE
TTANMNSSFIKFLKQSEENSEISSTLKLRQLKAFKSVLADIKKAHIALEEDLNLEIEALD
VVHKEEYTKELKITDAKCETKVQKGEKPCTLEKREFSKSEAKPSRKQVDGEGHTDPSVPT
EEQRASKSTSGEHRKSDGKDEPQYEPANTSEDLDMDIVSVPSSVPEDIFDNLETAMEVQN
SADHHGDGTSRTEQELETSSVKLNMPKDNKGGSKSKTTAAKVTKELYVKLTPVSLSNSPK
KGADSQEVPQDKDGSKGSALNLKSEKCGPGQENSDNEHVEENEVPLVLEESDLRRSPRVK
TTPLRRPTETNLPSSNSDEESNETMKEKQKLLGPLRKKDKRNSSDSAIDNPKPNKLPKSK
PSEIVDQNSDSDEMIAILKQASRMSPSSSSDTDINETHTNHKTLYDLKTQTGKDEKGKRK
RKSSSSGSDFDIKKGKSAKSSIIAKKKRQNQSDSSNYDSELEKEIKSMSKITAVRTTKKR
VPNKKDYDSSEDEKRSKKGMAKQRPKSVKNTPGGSSDDAERKQERKNSCPNEKDKTVDSR
DQLSKKQQPSVSFDGADKSSPGKEESLNSLGDKKGAKTKEKSKHLKAKTCKKAPIGLSDA
AEKVHRKEHSDELSEDDKTQNKKEMEEKEKKTTDSKKTVLKMEQQYESSSDGTEKSLEGE
EVDNFPKDIKPNKDDISDGEKKGRKSKDKMSKKKELSDSVEKLPEKGDSCDSSEDRKTKS
RVSTREKRKCRLPIKAPQKSQECSSSDEKYSLKEDGCDSSDKKLRRIELRERRNLNSKRN
IKGIPSGSSSSDAEESSEDNKKLKKPRTSAKKKTGSIKEKKRNSLGASTKRKQMEITSSS
SDIGDDGQNSLGEGSSDEQKIKPVTENLVLSSSHSGFCQSSGDEAISKSVPVTVDDDDDD
NDPENRIAKKMLLEEIKANLSSDEDGSSDDEPEEEKKRNGKQLEVNPGDEDTKNPVNSES
DSDSEESKKPRYRHRLLRHKLTVSDGESGEEKKTKPKEQKEAKIRSRRKVSSEDSEDTDF
QESGVSEAVSESEDEQRPRTRSAKKAELEENQRSYKQKKKRRRIKVQEDSSSENKSHSEE
EGKEEEEDEDEEEEDENDDSKSPGKGRKKIRKILKDDKLRTETQNALKEEEERRKRIAER
EREREKLREVIEIEDASPTKCPITTKLVLDEDEETKEPLVQVHRNMVIKLKPHQVDGVQF
MWDCCCESVKKTKKSPGSGCILAHCMGLGKTLQVVSFLHTVLLCDKLDFSTALVVCPLNT
ALNWMNEFEKWQEGLKDDEKLEVSELATVKRPQERSYMLQRWQEDGGVMIIGYEMYRNLA
QGRNVKSRKLKEIFNKALVDPGPDFVVCDEGHILKNEASAVSKAMNSIRSRRRIILTGTP
LQNNLIEYHCMVNFIKENLLGSIKEFRNRFINPIQNGQCADSTMVDVRVMKKRAHILYEM
LAGCVQRKDYTALTKFLPPKHEYVLAVRMTAIQCKLYQYYLDHLTGVGNNNEGGRGKAGA
KLFQDFQMLSRIWTHPWCLQLDYISKENKGYFDEDSMDEFIASDSDETSMSLSSDEYTKK
KKTKGKKGKKDSSSSGSGSDNDVEVIKVWNSRSRGGGEGNLDDTGNNPSGSLKLDESKAT
SASNPSSPAPDWYKDFVTDADAEILEHSGKMVLLFEILRMAEEIGDKVLVFSQSLISLDL
IEDFLELASREKTEDRDKPLIYKGEGKWLRNIDYYRLDGSTTAQSRKKWAEEFNDETNVR
GRLFIISTKAGSLGINLVAANRVIIFDASWNPSYDIQSIFRVYRFGQTKPVYVYRFLAQG
TMEDKIYDRQVTKQSLSFRVVDQQQVERHFTMNELTELYTFEPDLLDDPNSEKKKKRDTP
MLPKDTILAELLQIHKEHIVGYHEHDSLLDHKEEEELTEEERKAAWAEYEAEKKGLTMRF
NIPTGTNLPPVAFNSQTPYIPFNLGALSAMSNQQLEDLINQGREKVVEATNSVTAVRIQP
LEDIISSVWKENMNLSEAQVQALALSRQASQELDVKRREAIYNDVLTKQQMLISCVQRIL
MNRRLQQQYNQQQQQQMTYQQATLGHLMMPKPPNLIMNPSNYQQIDMRGMYQSVAGGMQP
PPLQRAPPPMRSKNPGPSQGKSM
NT seq
7452 nt
NT seq
+upstream
nt +downstream
nt
atgaccgctgagcccacgagtgaaagcaagttgaatactttggtgcagaagcttcatgac
tttctggcacactcctcagaggaatcagaagaaacaaattctcctcctcgacttttgaca
aatcaaaatatagataaagcccgtgtttctggaaataattctgatatgatggaaaataat
aaggaagagggaactggctcttcagaaaaattcagatcttcaggatcatcaagatcaaaa
aggaaaccttcaattgtaacaaaatatgtagaatcagatgatgaaaaacctctggatgaa
agtataaatgaagaagttcctaatgaaaactcagaaaatgatattactatgcaaagcttg
ccaaaaggtacagtgattgtacaaccagagccagtgctgaatgaagacaaagatgatttt
aaagggcctgaatttagaagcagaagtaaaatgaaaactgaaaatctcaaaaaacgcgga
gaagatgggcttcatgggatcgtgacctgcacagcttgtggacaacaggtcaatcatttt
caaaaagattccatttacagacatccttcgctgcaagtccttatttgtaagaattgcttt
aagtattacatgagtgatgatattagccgtgactcagatggaatggatgaacaatgtaga
tggtgtgctgaaggtgggaacttgatttgttgcgacttttgccataatgccttctgtaag
aaatgcattctgcgcaatcttggtcgaaaggagttatctacaataatggatgaaaacaac
cagtggtattgctacatttgtcaccctgaacctttgttggacttggtcactgcatgcaac
agcgtatttgagaatttagagcagttgttgcaacaaaataagaagaaaataaaagttgac
aatgaaaagagtagtaaaatatgtgatcacacacccaaattttctccaaagaagattagt
tccagttgtaatggagaagaaaagaaattagatgattcatgttctggttctataacctac
agttattcagcactaatagtgcccaaagaaatgattaagaaggcaaaaaaactgattgag
accacagccaacatgaactctagttttattaagtttttgaagcagagtgaagaaaattca
gaaatcagttctactctgaaattacgtcagcttaaggcttttaaatctgtgttggcggat
atcaagaaggctcacattgcattagaagaagatttgaatttggaaattgaagctttggat
gttgtacacaaagaggaatataccaaagagcttaaaatcacagatgctaagtgtgaaaca
aaagtacaaaaaggagaaaaaccctgtactttggaaaagagagagttttccaagtcagaa
gctaagccttcaagaaagcaggtagatggtgagggacacacagatccgagtgttccaaca
gaggagcagagggcaagtaaaagtactagtggtgaacataggaaatccgatgggaaagat
gaacctcagtatgaacctgccaacacgtcagaagacttagacatggacattgtatctgtt
ccttcctcagttccagaagacatttttgataatcttgagactgctatggaagttcaaaat
tcagctgatcatcatggggatggtaccagtagaacggagcaagagctagagacttcatct
gtaaaattaaatatgccaaaagacaacaaaggaggtagtaagtcaaaaactaccgcagct
aaagtaacaaaagaattatatgtgaagctcacccctgtttcactttctaattccccaaag
aagggtgctgatagtcaggaagttccacaagataaagatggctctaaaggttctgcactg
aacctaaaatccgagaaatgtggacctggacaggaaaacagtgataatgagcatgttgaa
gaaaatgaagttcctttagttttagaggaatctgatcttcgaagatcaccccgtgtgaag
accacacccttgaggcgaccaacagaaaccaatcttccatcatccaattcagatgaagaa
agtaatgaaaccatgaaggagaaacaaaaattattaggtccattaagaaaaaaggataag
agaaattcttctgacagtgctattgataatcctaaacctaacaaattaccaaaatcgaag
ccgtcagagatcgtagatcaaaattccgattctgatgaaatgatagcaatcctcaaacag
gcaagcagaatgagtcccagttcttcttcagatactgacattaatgaaactcatacaaat
cataagactctgtatgacttaaaaactcaaacagggaaagatgagaaaggcaaaagaaaa
cggaaaagctcttcttctggctccgattttgatattaaaaaaggcaagtcagctaaaagc
tctataattgctaaaaagaaacgtcaaaaccagtctgactcttcaaattatgactcagaa
ttagagaaagagataaaaagcatgagtaagattacggctgtcagaaccaccaaaaaaaga
gttcccaataaaaaagactatgattcttctgaagatgaaaaacgtagtaaaaagggaatg
gccaaacaaaggccaaaaagtgtgaagaataccccagggggatcatctgatgatgctgaa
aggaaacaagagagaaagaattcctgtcctaatgagaaagacaagactgtggactcaaga
gatcaactttctaagaagcagcagcccagtgtttcctttgatggtgcagacaaatcatct
cctgggaaagaggagagtttaaattctctgggagacaaaaaaggtgctaaaactaaagaa
aagagtaagcatctgaaagctaaaacatgtaaaaaggcacccattggcttatctgatgct
gctgagaaagtccacaggaaagagcacagtgatgaactctctgaagatgataagacacag
aacaaaaaggaaatggaagaaaaagaaaagaaaactacggactcaaagaagacagtattg
aagatggaacagcagtacgagtcatcgtctgatggcactgagaaatcacttgagggcgaa
gaagttgataattttcctaaggatataaaaccaaataaggatgacataagtgatggagaa
aagaaaggtagaaaatcaaaagataaaatgtccaaaaagaaagaattatctgacagtgtc
gagaaattgccagagaaaggagacagttgtgactcttcagaagacagaaagacaaagagt
agagtatctactagagagaagagaaaatgcaggttacccataaaggccccacagaagagt
caagagtgttcatcatctgatgagaaatactccctgaaagaagatggttgtgactcttcg
gataagaagctgagaagaatagaattgcgagagagaagaaatttaaattccaagagaaat
atcaagggaataccaagtggctcatcgtcttctgatgctgaggaaagttctgaagacaat
aaaaagctgaagaagccaagaacttcagctaaaaagaagacaggcagtatcaaggagaaa
aagagaaactccctaggagcaagtactaaaaggaagcaaatggagattacttcctcatct
tcagatataggagatgatggtcagaattctcttggtgaggggagcagtgatgaacagaaa
attaagcctgtgactgagaatttagtcctgtcttcttcccacagtggattttgccaatct
tcaggagatgaagccatatctaaatcagtgcctgtcacagtggatgatgacgatgacgac
aatgaccctgagaatagaattgccaagaagatgcttttagaagaaattaaagccaatctt
tcctctgatgaggatgggtcttcagatgatgaaccagaagaagagaaaaaaagaaatgga
aaacaacttgaagtcaatccaggagatgaagacacaaaaaatccagtcaattctgaatca
gattcagattctgaagaatctaagaagccaagatacagacataggcttttgaggcacaag
ctgactgtgagtgatggagaatctggagaagaaaaaaagacaaagcctaaagagcaaaaa
gaagccaaaattcgaagtagaaggaaggtgagcagtgaagactcagaagatactgatttt
caggaatcaggagttagtgaagcagttagtgaatctgaagatgaacagcggcctagaaca
aggtccgcaaagaaagcagaattggaagaaaatcagaggagttataaacaaaaaaagaaa
aggcgacgcattaaggttcaagaagactcatccagtgaaaacaagagccattctgaggaa
gaaggaaaggaagaagaggaggatgaagatgaggaggaagaggatgaaaatgatgattct
aagtctcctggaaaaggcagaaagaaaatccggaagattcttaaggatgacaaactaaga
acagaaacccaaaatgctcttaaagaagaggaagagagacggaagcgtattgctgagagg
gagcgtgagcgagagaaattgagagaagtcatagaaattgaagatgcttcacccaccaag
tgtccaataacaaccaagttggttttagatgaagatgaagaaaccaaagaacctttagtc
caggttcatagaaacatggttatcaaattgaaaccccaccaagtagatggtgtccagttt
atgtgggattgttgctgtgagtctgtgaagaaaacaaagaagtctccaggttcagggtgc
attcttgcccactgcatgggccttggtaagactttacaggtggtaagttttcttcacaca
gtcctcctgtgtgacaaattggatttcagtacagctttagtggtttgtccacttaatacc
gctttgaattggatgaatgaatttgagaagtggcaggagggattaaaagatgatgaaaag
cttgaggtctctgagttagccactgtgaaacgtcctcaggagagaagttacatgcttcag
aggtggcaagaagatggtggtgtgatgatcatagggtatgagatgtacagaaatcttgct
caaggaaggaatgtaaagagtcggaaactgaaagaaatatttaataaagctctagttgat
ccaggtcctgactttgttgtttgtgatgaaggccatattcttaaaaacgaagcatctgct
gtttccaaagctatgaattctatacgatcaaggagaaggattattttaacaggaactcca
cttcaaaataacctgattgagtatcattgcatggttaactttatcaaggaaaatttgctt
ggatccattaaggagttcaggaacagattcataaatccaatccaaaatggtcagtgtgca
gattctaccatggtagacgtcagagtgatgaaaaaacgtgctcatattctctatgagatg
ttagctggctgtgttcagaggaaagattatacagcattaacaaaatttttacctccaaaa
catgagtatgtgctggctgtgagaatgacagctattcagtgcaagctttaccaatactac
ttagatcacctaacaggtgtagggaataacaatgaaggtggcagaggaaaggcaggtgca
aaacttttccaagattttcagatgttaagtcgaatctggactcatccttggtgtctgcag
ctggactacattagcaaagaaaataaggggtattttgatgaagatagtatggatgaattc
atagcttcggattctgatgaaacttccatgagtctaagctctgatgagtataccaaaaaa
aagaaaacaaaggggaagaaggggaagaaagacagtagctcaagtggtagtggcagtgac
aatgatgttgaagtgattaaggtctggaattcccggtcgagaggtggtggcgaagggaat
ctggatgacaccggaaacaacccctctggatctttaaagctggatgaaagtaaagctacg
tcagcttctaatccaagcagcccagctccagactggtacaaagattttgtaacagatgct
gatgctgagattttagagcattctgggaaaatggtacttctctttgaaatccttcgaatg
gcagaagaaattggggataaagtacttgtgtttagccagtctctcatatctctggacttg
attgaagatttccttgagttggccagtcgggagaaaacagaagatagagataaacctctt
atttataaaggtgaagggaagtggctccgcaatatagactactaccgtttagatggctct
accactgcacagtcacgcaagaagtgggctgaagagttcaatgatgaaaccaatgtgaga
gggcgattatttatcatatccaccaaagcaggatctcttggaattaatctggtagctgct
aatcgagtaattatattcgatgcttcttggaatccatcctatgatatccagagtatattc
agagtttatcgctttggacaaacaaagcctgtatatgtatataggttcttagctcaggga
accatggaggataagatttatgaccggcaggtaactaagcaatctctgtctttccgagtt
gtggatcagcagcaggttgagcggcattttaccatgaatgagcttactgaactttatact
tttgagcctgacttattagatgaccctaattctgaaaagaagaagaagagggacactccc
atgctgccaaaggataccatacttgcagaacttcttcaaatacataaagaacacattgta
ggatatcatgaacatgactctctgttggaccacaaagaagaggaagagttgactgaagaa
gaaagaaaagcagcttgggctgaatatgaggcagaaaagaagggactgaccatgcgtttc
aacataccaactgggaccaatttaccccctgttgctttcaactctcaaactccttatatt
cctttcaatctgggagccctgtcagcaatgagtaaccaacagctggaggaccttattaat
caaggaagagaaaaagttgtagaagcaaccaacagtgtgacagcagtgaggattcagcct
cttgaagatatcatttcatctgtatggaaggaaaacatgaatctctctgaggcccaagtg
caggcattagccttgagtagacaagccagccaggagcttgatgtgaagcggagggaagcg
atctacaatgacgtattgacaaaacaacagatgttaatcagctgcgtccagcgaatactt
atgaacagaaggcttcagcagcagtacaatcagcagcagcaacaacaaatgacttaccag
caagcgacactgggccacctcatgatgccaaagcccccaaatttaataatgaatccttcc
aattaccagcagattgatatgagaggaatgtatcagtcggtggccggtgggatgcagccc
ccaccacttcagcgtgccccaccccccatgaggagcaaaaacccaggaccttcccaaggg
aaatcaatgtga
DBGET
integrated database retrieval system
