KEGG   Dipodomys merriami (Merriam's kangaroo rat): 138840468
Entry
138840468         CDS       T11079                                 
Symbol
Rbbp7
Name
(RefSeq) histone-binding protein RBBP7
  KO
K11659  histone-binding protein RBBP7
Organism
dmer  Dipodomys merriami (Merriam's kangaroo rat)
Pathway
dmer03082  ATP-dependent chromatin remodeling
dmer03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:dmer00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    138840468 (Rbbp7)
   03083 Polycomb repressive complex
    138840468 (Rbbp7)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:dmer03036]
    138840468 (Rbbp7)
Chromosome and associated proteins [BR:dmer03036]
 Eukaryotic type
  Histone modification proteins
   HDAC complexes
    Sin3A-HDAC complex
     138840468 (Rbbp7)
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     138840468 (Rbbp7)
    PRC2.2
     138840468 (Rbbp7)
  Chromatin remodeling factors
   NuRD complex
    138840468 (Rbbp7)
   NuRF complex
    138840468 (Rbbp7)
SSDB
Motif
Pfam: WD40 WD40_CDC20-Fz CAF1C_H4-bd WD40_Prp19 Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd Beta-prop_EIPR1 Beta-prop_TEP1_2nd WDR55 Beta-prop_EML Beta-prop_EML_2 WD40_WDHD1_1st EIF3I Beta-prop_WDR75_1st WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_RIG_1st WD40_RFWD3 Beta-prop_WDR19_1st WD_LRWD1 ANAPC4_WD40 Beta-prop_DCAF12 WD40_MABP1-WDR62_1st eIF2A Beta-prop_SPT8 Beta-prop_IFT122_1st MIOS_WD40 NBCH_WD40 Beta-prop_DCAF4
Other DBs
NCBI-GeneID: 138840468
NCBI-ProteinID: XP_069896915
LinkDB
Position
Unknown
AA seq 425 aa
MASKEMFEDTVEERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDY
ALHWLVLGTHTSDEQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIKI
NHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGY
GLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHES
LFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALW
DLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAED
GPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEEADVTTSEL
QGQGS
NT seq 1278 nt   +upstreamnt  +downstreamnt
atggcgagtaaagagatgtttgaagatactgtggaggagcgtgtcatcaatgaagaatat
aaaatctggaagaagaatacaccgtttctctatgacctggttatgacccatgctcttcag
tggcccagtcttactgttcagtggcttcctgaagtgactaagccggaaggaaaggattat
gctcttcactggctggtgctgggaactcatacatctgatgagcagaatcatttggtggtt
gctcgagttcatattcccaatgatgatgcacagtttgatgcttcccattgtgacagtgac
aagggtgaatttggcggctttggttctgtgacaggaaaaattgaatgtgagattaagatt
aaccatgaaggagaggtgaaccgtgctcgctacatgccgcagaatcctcacatcattgct
acaaaaacaccatcttctgatgtgttggtttttgactatacaaagcatcctgctaagcca
gacccaagtggagagtgtaatcctgatcttaggctaagaggtcaccaaaaggaaggttat
ggtctttcctggaactctaatctgagtggacatctcctaagtgcatccgatgaccatact
gtctgcctgtgggatattaatgcaggaccaaaggaaggcaaaattgtggatgccaaagca
atctttaccggccactctgctgttgtcgaagatgtggcctggcatctgctgcatgagtca
ctgtttggatctgttgctgatgatcagaaacttatgatatgggacaccagatctaatacc
acctctaagccaagccacttggtggatgcgcacaccgctgaggtcaactgcctctcattc
aatccctacagtgaattcattctagcaactggctctgcggataagaccgtagctttgtgg
gacctgcgtaacttaaagttaaaactccatacctttgaatcgcataaggatgaaattttc
caggtccactggtctccacataatgaaaccattctggcttcaagtggtactgatcgccgc
ctgaatgtatgggatttaagcaaaattggagaagagcaatctgctgaagatgcagaagat
ggacctccagaactcctgttcattcacggagggcacactgccaagatttccgacttcagc
tggaaccccaatgagccttgggtcatttgctcagtgtcagaggataacatcatgcaaata
tggcagatggctgaaaacatttacaatgatgaagaggcagatgtcacaacatcggaactg
cagggacaaggatcttaa

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