Dipodomys merriami (Merriam's kangaroo rat): 138840690
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Entry
138840690 CDS
T11079
Name
(RefSeq) lys-63-specific deubiquitinase BRCC36-like
KO
K11864
BRCA1/BRCA2-containing complex subunit 3 [EC:3.4.19.-]
Organism
dmer Dipodomys merriami (Merriam's kangaroo rat)
Pathway
dmer03440
Homologous recombination
dmer04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
dmer00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
138840690
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
138840690
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
dmer01002
]
138840690
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dmer04121
]
138840690
03036 Chromosome and associated proteins [BR:
dmer03036
]
138840690
03400 DNA repair and recombination proteins [BR:
dmer03400
]
138840690
Peptidases and inhibitors [BR:
dmer01002
]
Metallo peptidases
Family M67
138840690
Ubiquitin system [BR:
dmer04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
138840690
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
138840690
BRISC complex
138840690
Chromosome and associated proteins [BR:
dmer03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
BRISC complex
138840690
DNA repair and recombination proteins [BR:
dmer03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
138840690
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
JAB
BRCC36_C
Prok-JAB
Motif
Other DBs
NCBI-GeneID:
138840690
NCBI-ProteinID:
XP_069897055
LinkDB
All DBs
Position
Unknown
AA seq
285 aa
AA seq
DB search
MAVQAVHLDSDVFLVCVNHALSTDKEEVMGLCIGVLKEEEGSHTRCGGSGEDLGTVAAQA
QAARIVHIRSVIILPRSDKRKDRVEISPEQLSAASAETERLAALTGSPLRVVGWYHSHPH
ITVWPSHVDIRTQAAYQMMDPGFVGIIFSCFVEDKNTNTGQIAYTCFQSARAPRSAEYER
VDVPLHVVPRASIGKACLQSLVELPKILWQEELASYRRMCGRPDQDPVARIRNASAYVDH
VCSQVSAISDPLLQWLENRVEQNQEFLQELTQEKKELMEKLSSLK
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atggcggttcaggcggttcacctcgattccgacgttttcctcgtgtgcgtcaaccacgct
ctgagcaccgataaagaggaggtaatgggcctgtgtattggggtgctgaaggaggaagag
gggagtcacacccgttgtgggggttccggagaggatctgggcaccgtggctgcgcaggcc
caggcggcccggatcgtccatattcgctccgtcatcatcttgccgcggtcggacaagagg
aaggaccgggtggagatctccccggagcagctgtcggcggcctcggcggagacggagagg
ctggcggcgctcaccgggagcccgctgcgggtggtgggctggtaccactcccacccccac
atcaccgtctggccgtcccacgtggacatccgcacccaggccgcctaccagatgatggac
ccaggcttcgtcgggattatcttctcctgcttcgtggaggataaaaacacgaacacgggc
cagatcgcttacacctgcttccaatccgcccgcgccccgaggagcgccgagtatgagagg
gtcgatgtccccctccacgtggtacctcgtgccagcatcgggaaagcgtgcctccagtcg
ctagtggagctgcccaagatcctgtggcaggaagaactggcctcgtacaggaggatgtgc
ggccgccccgatcaggacccggtagccaggatccgcaatgcctcggcgtacgtggatcat
gtgtgcagtcaggtgtccgcgatcagcgaccccctcctccagtggctggagaacagagtg
gagcaaaaccaagagtttctgcaggagttgacccaagagaagaaagagcttatggaaaaa
ctttcttctctaaagtga
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