KEGG   Dipodomys merriami (Merriam's kangaroo rat): 138840911
Entry
138840911         CDS       T11079                                 
Name
(RefSeq) ataxin-2-like isoform X1
  KO
K23625  ataxin 2/2L
Organism
dmer  Dipodomys merriami (Merriam's kangaroo rat)
Pathway
dmer05014  Amyotrophic lateral sclerosis
dmer05017  Spinocerebellar ataxia
dmer05022  Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:dmer00001]
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    138840911
   05017 Spinocerebellar ataxia
    138840911
   05022 Pathways of neurodegeneration - multiple diseases
    138840911
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dmer03019]
    138840911
Messenger RNA biogenesis [BR:dmer03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     138840911
SSDB
Motif
Pfam: SM-ATX LsmAD PAM2 LSM
Other DBs
NCBI-GeneID: 138840911
NCBI-ProteinID: XP_069897413
LinkDB
Position
Unknown
AA seq 1307 aa
MHSEAAAPRGPEAAPEPRRRAAACGAPGRRSLPRTARRGGRGGAAAYPSAAPPPRGPGPP
PRGPRSPPSASDCFGSNGHGGGGASLPGSPRLLGFGGPPRPLVVLLLPLAPPAAPPRAAP
LGARASPPRSGVVSARPAPGFPRPACEPVHGPLAMSLKPQQQQQPPPPPQQQQPPPPPPP
PPPPAAASARKPGGGPGLLSSPAAAPAPTSVSSSSAASSSSSSSSSSSSAAVGAGGGRPG
LGRGRNSNKGLPQSSISFDGIYANMRMVHILTSVVGSKCEVQVKNGGIYEGVFKTYSPKC
DLVLDAAHEKSTESSSGPKREEIMESILFKCSDFVVVQFKDMDSSYARRDAFTDSAISAK
VNGEHKEKDLEPWDAGELTASEDLEALENDVSNGWDPNDMFRYNEENYGVVSTYDSSLSS
YTVPLERDNSEEFLKREARANQLAEEIESSAQYKARVALENDDRSEEEKYTAVQRNSSDR
EGHSVSTRENKYIPPGQRNREVMSWGSGRQNSPRMGQPGPGSMPSRSASHTSEFNPSSGA
DQRVVNGGVPWPSPCPSPSSRPPSRYQSGPTSLPPRAATPTRPPSRPPSRPSRPPSHPSA
HGSPAPVSTMPKRMSSEGPPRMSPKAQRHPRNHRVSAGRASIASGLEFVSHNPPSEVAAP
PVARTSPAGGTWSSVVSGVPRLSPKTHRPRSPRQNSVGNPPSGPVLTSPPAGTAPAEAIG
MPVAATSPTPASPAINRAGTPSAEAKDSRLQDQRQNSPAGNKECLKAIEASPSFSKTENK
GISPVVSEHRKQIDDLKKFKNDFRLQPSSTTESMDQLLNKNREGEKPRDLLKDKIEPICK
DSFIENSSSNCTSGSSPSASPSVLSSVEPRRGPEVTSQGVQTSSPACKQEKDDKDEKKDA
AEQVRKSTLNPNAKEFNPRSFSQPKPSTTPTSPRPQAQPSPSMVGPQQPTPVYTQPVCFA
PNMMYPVPVSPGVQPLYPIPMTPMPVNQAKTYRAVPNMPQQRQDQHHQSTMMHPASAAGP
PIVATPPAYSTQYVAYSPQQFPNQPLVQHVPHYQSQHPHVYSPVLQGNARMMAPPAHAQP
GLVSSSATQYGAHEQTHAMYACPKLPYNKETSPSFYFAISTGSLAQQYAHPSATLHPHPP
HPQPSATPTGQQQSQHGGSHPAPSPVQHHQHQAAQALHLASPQQQPAIYHAGLAPTPPAM
TPASNTQSPQNSFPTAQQTVFTIHPSHVQPAYTNPPHMAHVPQAHVQSGMVPSHPTAHAP
MMLMTTPPPGGPQAALAQSALQPIPVSTTAHFPYMTHPSVQAHHQQL
NT seq 3924 nt   +upstreamnt  +downstreamnt
atgcactcggaggccgcagctcctcggggtcccgaggcggcccccgagcctcgccgccgc
gccgccgcctgcggcgctcccgggcggcgctcgctcccgcggacggcgcggcgcggcggc
aggggcggcgcggccgcgtatccctccgccgcccctcccccgcgcggccccggcccccct
ccccgcgggccgcgctcgcctccctccgcctcagactgttttggtagcaacggccacggc
ggcggcggcgcgtccctgcccggctccccgcggctcctcggcttcggcgggcctccccgc
cccttggtcgtcctcctcctgcccctcgcccccccggccgcgccgccccgcgccgccccg
ctcggcgcccgcgcgtccccgccgcgctccggcgtcgtctcggcgcgcccggcccccggc
tttccccgcccggcgtgcgagccggtgcatgggccgctcgccatgtcgctgaagccccag
cagcagcagcagccgccgccgccgccgcagcagcagcagccgccaccgccaccgccgccg
ccgccgccacccgcggccgccagtgcccgcaagcccggcggcggccccggcctcctctcg
tcgcccgccgccgcgccggccccgacctcggtctcgtcgtcctcggccgcctcctcctct
tcctcctcctcctcttcctcctcctccgcggcggtcggcgcaggcggagggcggcccggc
ctgggcagaggtcgaaatagtaacaaaggactgcctcagtcttcgatttcttttgacgga
atctatgcaaatatgcggatggttcatatacttacatcagttgttggatccaaatgtgaa
gtacaagtgaagaatggaggtatatatgaaggagtttttaaaacatacagtcccaagtgt
gatttggtacttgatgctgcacatgagaaaagtacagaatccagttcggggccaaaacgt
gaagaaataatggagagtattttgttcaaatgttcagacttcgttgtggtacagtttaaa
gatatggactccagttatgcaagaagagatgctttcactgactctgctatcagtgctaaa
gtgaatggtgagcacaaggagaaggatctggagccctgggatgccggggaactcacagcc
agtgaggacctcgaggctttggaaaatgatgtttctaatgggtgggaccccaatgatatg
tttcgatacaatgaagaaaattatggtgtggtgtctacgtatgacagcagtttatcttca
tacacggtaccgttagaaagggataattcagaagaatttttaaaacgggaagcaagggca
aatcagttagcagaagaaattgagtccagtgctcagtacaaagctcgggtggctctggaa
aacgatgacaggagcgaggaagaaaaatacacggccgttcagagaaactccagtgaccgg
gaggggcacagtgtgagcaccagggaaaataaatatattcctcctggacaaagaaataga
gaagtcatgtcgtggggaagtgggagacagaattcaccacgcatgggccagccggggccg
ggctccatgccttccagatctgcgtctcacacttcagagttcaacccgagttctggtgca
gaccaaagagtagttaatggaggtgtcccctggccatcgccttgcccatctccttcctct
cgcccaccttctcgctaccagtcaggtcccacctctcttccacctcgggcagccacccct
acacggccgccctccaggcccccctcgcggccatccagacccccgtctcacccctctgct
catggttctccagctcctgtctctactatgcctaaacgcatgtcttcagaagggcctccc
aggatgtctccgaaggcccagcgacaccctcgcaaccacagagtttctgctgggcgggcc
tccatagccagcggcctagaatttgtatcccacaacccgccaagtgaagtagcagctcct
ccggtggccaggaccagtccagccgggggaacgtggtcatcagtggtcagtggtgttccg
agattatctccaaaaactcacagacccaggtctccccgacagaacagtgttggaaaccct
cccagcgggcctgtgctcacttctcctccagctggtaccgccccggccgaagcaattggc
atgcctgttgctgctacgtctcctacgcctgccagccccgccatcaatagagccgggacc
ccatccgctgaggctaaagattccagactccaagatcagaggcagaattctccagcagga
aataaagaatgcctgaaagccattgaagcatcgcctagcttctcaaaaactgaaaataaa
ggtatatcaccagttgtttctgaacacaggaaacaaatagatgatttaaagaagttcaag
aatgattttaggttacagccaagttccacaacggagtcaatggatcaactactaaataaa
aatagagagggagaaaagccaagggatttgctcaaagacaaaattgaacccatttgtaag
gactctttcattgaaaatagcagcagcaactgtaccagcggcagcagccccagcgcctcc
ccgtccgtcctcagcagtgtagagccccggaggggaccggaggtcacctcccaaggcgtg
cagacttccagtccagcgtgcaagcaagagaaagatgataaggacgagaagaaagatgca
gctgagcaagttaggaaatctacattgaatcccaatgcaaaggagttcaaccctcgatcc
ttctctcagccaaagccttccaccaccccaacttcacctcggcctcaagcacaaccgagc
ccctcaatggtgggtcctcagcagcccacaccagtctatacgcagcctgtttgttttgca
ccaaacatgatgtatccagtccctgtgagtccgggtgtgcaacctttatacccaataccc
atgacgcccatgccagtgaatcaagccaagacctatagagcagtaccaaacatgccccaa
cagcgacaggaccagcatcatcagagcaccatgatgcacccggcctcggcggcaggcccg
cccatcgtggccaccccaccagcctactccactcagtacgtggcctacagcccgcagcag
tttccaaatcagcccctcgttcagcacgtgccacactaccagtctcagcaccctcatgtc
tacagtcctgtactacagggtaacgctaggatgatggcaccgccagcacacgcgcagccg
ggtttagtgtcgtcttcagcaactcagtacggggctcatgagcagacgcatgctatgtat
gcatgtcccaaattaccgtacaacaaggagacaagcccttctttctactttgccatttcc
acaggttcccttgctcagcagtacgcgcaccccagcgctaccctgcacccccatcctcca
caccctcagccttcagccacccccacgggacagcagcagagccagcacggcggaagtcac
cccgcacccagtcctgttcagcatcatcagcaccaggccgcccaggctctccacctggcc
agcccacagcaacaaccagctatttaccacgcggggctggcgcccaccccacccgccatg
acgccagcctccaacacacagtcgccacagaacagtttccccacagcacaacagacggtg
ttcaccatccatccttctcacgtccagccggcatacaccaacccaccacacatggcccac
gtacctcaggcccatgtacagtcaggaatggttccttctcatccaactgcccatgcgcca
atgatgctaatgacgacaccgccacctggcggcccccaggccgccctcgctcaaagtgca
ctacagcccattccagtctcgacaacagcgcatttcccctatatgacgcacccttcagtg
caagcccaccaccagcagctgtaa

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