Dipodomys merriami (Merriam's kangaroo rat): 138840915
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Entry
138840915 CDS
T11079
Name
(RefSeq) homeobox protein cut-like 2 isoform X1
KO
K09313
homeobox protein cut-like
Organism
dmer Dipodomys merriami (Merriam's kangaroo rat)
Brite
KEGG Orthology (KO) [BR:
dmer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dmer03000
]
138840915
Transcription factors [BR:
dmer03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain CUT
138840915
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CUT
Homeodomain
Homeobox_KN
DUF4407
Golgin_A5
Motif
Other DBs
NCBI-GeneID:
138840915
NCBI-ProteinID:
XP_069897431
LinkDB
All DBs
Position
Unknown
AA seq
1393 aa
AA seq
DB search
MNSTVHPAFSQGTLMKAGAAWVPPKLLISCSSWTKVVALSKRSQEAEAAFLSVYKQLIEA
PDPVSRFEVGRSLDNRPQPPSWDPSGQARQDPPAPWKRHPERRGPKEQRDGLCLPGPILT
EGSCVPGAPGKAHLTDALLHRNEAEKQKGLQDVQLTLAARLGEAEEKIKVLHSALKATQT
ELLELRRKYDEEAASKADEVGLIMTNLEKANQRAEAAQREVESLREQLASVNSSIRLACC
SPQGPSGDKVSFALCSGPRLEAALASKDREILRLLRDAQHLRHSLRELEEASANQIADLE
RQLAAKTEAIEKLEGKLRAQSDYEEIKTELSILKAMKLASSSCSLPQGLAKAEDSMLIAR
ETFFPAPKFLLDKPVLLASPEEDPSEDDSIKCSLGTEAPYPPLPPPQELPPPPGPEDPLS
PSPGQPLLGPDGARTFSLSPFPGLASGDPLLPKPVPSPAAFKGEAGGLLVFPTAFYSAKP
PPAPATPVPGPEPAGAPEPADGAGPAAEEEQLDTADIAFQVKEQLLKHNIGQRVFGHYVL
GLSQGSVSEILARPKPWRKLTVKGKEPFLKMKHFLSNEQNVLALRTVQVRQRGSITPRIR
TPETGSDDAIKSILEQAKKEIESQKGGEPGAAAAGPAAAAAAAGSTSEAAIRGILERARR
EMQAQQRALLELEGARRPAASPPEPEPGPEPPAPAVKLEEGGPAPRPALSPAAFVQSIIR
RVKSEIGDAACCLEPPWAPGRAPASPAPSSASSASGPPGARGARAGDHDEPDDEAEDETR
PELKAEAAEAPGGARAPFPPFAPRALRPTVPPLTPEQYELYMYREVDTPGLTRRVKEKLA
KNGICQRVFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFIRMQLWLSDQLGQAGAQP
PSAAQASPLELRSSPSPPPSPTGPEKSSPEPLSLSLESSKENQQPEARPGTTPTGKTYSG
QAVGGIQEIVAMSPELDTYSITKRVKEVLTDNNLGQRLFGESILGLTQGSVSDLLSRPKP
WHKLSLKGREPFVRMQLWLSDPHNVDKLRDMKKLEKKAYLKRRYGLISPGSDRESPATRS
ECPSPCPPPLELSLLQVKKPRVVLAPEEREALRQAYQLEPYPSQQTIELLSFQLKLKTNT
VINWFHNYRSRMRRETLVEGAQDEPELDPGARPPRHGPPDPTPRSPTSEAEEQKPELSEL
RACRAGAAPLPAPDGARVRVKQERTEEEGGCEPQDLGEPDPARTAPKEEHADPPGSEELP
KGALGPLLPAGLPPDCPWQHPCHEGQAGPRPPALESESSRGSLEEPPTPPSTASSPGLGA
ASVSPVSPVPSSSGPLPSPPSAPPASAPSASPTASAKVNPNLQRRHEKMANLNSIIYRLE
KAANRDEALEWEF
NT seq
4182 nt
NT seq
+upstream
nt +downstream
nt
atgaactccaccgtacacccagccttctcccaaggaaccctgatgaaggcgggcgcggca
tgggtcccgcccaaactcctgatttcttgctccagttggaccaaggtggtggctctcagt
aagaggagtcaggaggcggaggcggcttttctgagtgtttacaagcagttaattgaagcg
ccagaccctgtgtccaggtttgaggtggggcgcagcctggacaacagaccgcagcccccc
agctgggaccccagcggccaggcccggcaagacccccccgccccgtggaagaggcacccg
gagcgccgcgggcccaaagagcagagggacgggctgtgtctcccgggacccatcctgact
gagggcagctgtgtccccggagcccccgggaaagcccacctgacagacgccttgctgcac
cggaatgaagcagagaaacagaagggccttcaggacgtccagctcaccctggcagccaga
ctgggggaggccgaggagaaaatcaaggtgttacattcagcgctgaaggctacgcagacg
gagctgctagagctgcgccgaaagtacgatgaggaggcggcctccaaggcggatgaagtc
ggcctgattatgacaaacctggagaaggccaaccagagagccgaggccgcccagcgggag
gtggagagtctccgggaacagctggcctccgtcaacagctccatccgcctggcctgctgc
tccccgcaggggcccagtggggacaaggtgagcttcgccctgtgctcgggacctcggctg
gaggctgcgctggcctccaaggaccgcgagatcctgcggctgctgcgggacgcgcagcac
ctgcggcactccctgcgagagctggaggaggcctcggccaaccagatcgccgacctggag
cgccagctggcggccaagacagaagccatcgagaaactggaaggaaagctccgcgcccag
tctgattatgaagaaattaagacggagctgagcatcctcaaagccatgaaactggcctcc
agctcctgcagccttccacagggcctggccaaggctgaggactccatgctcatagccagg
gagaccttcttccccgcacccaagttcctgctagacaagccggtgctcctggccagccct
gaggaggatccctctgaagacgactccatcaagtgctcgctgggcacggaggccccgtac
cccccgctccccccgccacaggagctgccccctccaccaggccccgaggaccccctgtca
cccagccccgggcagcccctgctgggccccgatggcgcgcggactttctcgctgtctccc
ttccccggcctggcgtcaggggacccgctgctgcccaagcccgtcccctccccggccgcc
ttcaagggggaggccggcggcctgctggtgttccccacagccttctacagcgccaagccc
cccccggcccccgccaccccggtgcccgggccggagcccgctggagcccccgagccggcc
gatggagccgggcctgcggcggaggaggagcagctggacacggcggacatcgccttccag
gtgaaggagcagctgctcaagcacaacatcgggcagcgcgtgttcggccattacgtgctg
ggcctgtcccagggctcggtgagcgagatcctggccaggcccaagccctggcgcaagctc
acagtgaagggcaaggagcccttcctcaagatgaagcacttcctgtccaacgagcagaac
gtgctggccctcaggaccgtccaggtgcggcagcgaggcagcatcactccaagaatccgc
acgccggagacaggctcagacgatgccatcaagagcattctggagcaggccaagaaggag
attgagtctcagaaagggggcgagccgggcgcggcggcggcgggccccgcggcggcggcg
gcggcggcgggcagcacgtccgaggcggccatccgcggcatcctggagcgcgcgcggcgg
gagatgcaggcgcagcagcgggcgctgctggagctggagggcgcgcggcggcccgcggcg
tcgccgccggagccggagccggggcccgagccgcccgcgcccgccgtgaagctggaggag
ggcggccccgcgccgcggcccgcgctgtcgcccgccgccttcgtgcagagcatcatccgc
cgggtcaagtccgagatcggcgacgccgcctgctgcctggagccgccctgggcgccgggc
cgcgcgcctgcctcgcctgcgccctcctccgcctcgtcagcctcggggccgcccggggcc
cgcggggcccgcgccggcgaccacgacgaacccgacgacgaggccgaggacgagacgcgg
cccgagctcaaggccgaggccgccgaggcgccgggcggcgcgcgcgccccgttcccgccc
ttcgcgccgcgcgcgctgcgccccacggtgccgccgctgacgcccgagcagtacgagctg
tacatgtaccgcgaggtggacacgcccggcctcacgcgcagggtcaaggagaagctggcc
aagaacggcatctgccagcgggtcttcggggagaaggtgctgggcctgtcgcagggcagc
gtgagcgacatgctgtcccggccaaagccctggagcaagctgacgcagaagggccgggag
ccgttcatccgcatgcagctgtggctgtcagaccagctgggccaggcgggggctcagccg
cccagcgccgcccaggccagtcccctggagctaaggtcttcaccatcgccacccccaagc
cccacggggccagagaagagctccccagagcccctgagcctctctctggagagcagcaag
gaaaaccagcagcctgaggcgcgcccgggcaccacacccaccgggaaaacatactccggc
caggccgtagggggcatccaggaaattgtggccatgtcccccgagctggacacatactcc
atcaccaagagggtcaaggaggtgctgacagacaacaacctagggcagcggctgtttgga
gagagcatcctggggctgacgcagggctccgtgtcagacctgctgtcccggcccaagccc
tggcacaagctgagcctgaagggccgggagccgttcgtccgcatgcagctgtggctcagc
gaccctcacaacgtggacaagctgcgggacatgaagaagctggagaagaaagcctacctg
aagcgccgctatgggctcatcagccccggctcggaccgcgagtccccggccacgcgctct
gagtgccccagcccgtgcccgccgccgctggagctgagcctgctgcaggtgaagaagccc
cgggtggtgctggcgcccgaggagagggaggcgctgcgccaggcctaccagctggagccc
tacccctcgcagcagaccatcgagctgctgtccttccagctcaagctcaagaccaacacc
gtcatcaactggttccataactacaggtccaggatgcgcagggagacgctggtggaagga
gcccaggatgagcccgagctggaccccggcgcccggccgccccgccacggccccccagac
cccaccccgaggagccccacgtcggaggccgaggagcagaagccagagctgagcgagctg
cgggcctgcagggccggggccgcacccctgcccgccccggacggggcccgcgtgagggtc
aagcaggagcggaccgaggaggaggggggctgtgagccccaggacttgggggagccggac
ccagcccgtactgcccccaaagaggagcacgcggaccctccgggcagcgaggagctccct
aaaggggcgctgggacccctccttcccgcggggctccccccagactgcccttggcaacac
ccctgccacgagggccaggccgggcctcggccgcccgccctggagtccgagtcgtcccgc
ggcagcctggaggagcctcccaccccgccctccacggcctcctcaccgggcctcggcgcg
gcctccgtgtcccccgtgtcccccgtcccctcatcctcgggccccctgccctcccccccc
agcgccccgcctgccagcgcacccagtgccagccccacggccagtgccaaggtgaacccc
aacttgcagcggcggcatgagaagatggccaacttgaacagcatcatctaccggctggag
aaggccgccaaccgggacgaggccctggagtgggagttctga
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