Dipodomys merriami (Merriam's kangaroo rat): 138841151
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Entry
138841151 CDS
T11079
Symbol
Sox13
Name
(RefSeq) transcription factor SOX-13 isoform X1
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
dmer Dipodomys merriami (Merriam's kangaroo rat)
Brite
KEGG Orthology (KO) [BR:
dmer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dmer03000
]
138841151 (Sox13)
Transcription factors [BR:
dmer03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
138841151 (Sox13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_WDHD1
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
138841151
NCBI-ProteinID:
XP_069897856
LinkDB
All DBs
Position
Unknown
AA seq
637 aa
AA seq
DB search
MSMRSPVSAQLALDGAGTMVNCTVKSEERKEPCHDAPQAVAAAAEPRPGDPALAPQDAVD
PQAPAQDCSSPESNRSPEPKRPAASEAASGSQEKLDFNRNLQEVVPAIEKLLCSDWKERF
LGRSSVETKDVKGTQESLAEKELQLLVMIHQLSTLRDQLLTAHSEQKNMAAMLFEKQQQQ
MELARQQQEQIAKQQQQLIQQQHKINLLQQQIQQVNMPYVMIPAFPPSHQPLPVSPESQL
ALPIQPIPCKPGTSSHLACTRKPAGTKFPDNPPRGPYQHLLCVEYPLQLLHSPPAPVVKR
PGALGTHHPLQEPSQPLNLTAKPKAPELPSSSSSPGLKMNNCGPRPPSHGAPTRDLQSSP
PSLPLGFLGEGDAVTKAIQDARQLLHSHSGAVESSPNPPFRKDLISLDSSPAKERLEESC
VHPLEEAMLSCDVDGSRHFPESRNSSHIKRPMNAFMVWAKDERRKILQAFPDMHNSSISK
ILGSRWKSMTNQEKQPYYEEQARLSRQHLEKYPDYKYKPRPKRTCIVEGKRLRVGEYKAL
MRTRRQDARQSYVIPPQAGQIQMSSSDVLFPRAAGVHVPQSLDPNMPVIVNTCSLREVVE
GADDRHSVADDEMYRYSEEEDSEGEDKSDGELVVLTD
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgtccatgcggagccccgtctctgcgcagctggccctggatggcgctggcaccatggtg
aactgcaccgtcaagtctgaggagaggaaagagccgtgccacgacgctccccaggctgtg
gccgctgcagccgagccccggcctggagacccagccctggcgccccaggatgctgttgac
ccccaagctccagctcaggactgcagctcccctgagagcaaccggtccccagagcccaag
agaccagccgcctctgaggctgcttctggaagccaggagaagctggacttcaaccgcaat
ctacaggaggtggtgccggccattgagaagctgctgtgcagtgattggaaggagagattt
ctgggaagaagctctgtggaaaccaaagatgtcaaagggactcaagagagcctggcagag
aaggagctccagcttctagtcatgatccaccaactgtccaccctgcgggaccagctcctc
acggcccactcggagcagaagaacatggccgccatgctcttcgagaagcagcagcagcag
atggagctggcccggcaacagcaggagcagattgccaagcaacagcagcagctgatccag
cagcagcataagatcaacctcctccagcagcagatacagcaggtcaacatgccttatgtc
atgatcccagcctttccccccagccaccagcctctgcccgtcagccctgaatcccagctg
gctttgcccattcagcctatcccctgcaaaccaggcactagctcacatctcgcctgtacc
aggaagcctgctggaacaaagttccctgacaacccacctcggggcccatatcagcacctg
ctatgtgtggagtacccgctgcagctgctccatagcccccctgcccctgtggtgaagagg
cctggggccctgggaacacaccaccccctgcaggagccctcccagcccctgaacctcaca
gccaagcccaaggcccctgagctgccttccagctccagctctcctggcctgaaaatgaac
aactgtgggccacgtccccccagccacggggcccccacgcgggacctgcagtccagcccc
cccagcctgcctctaggcttcctcggtgaaggggatgcagtcaccaaagccatccaggac
gctcggcagctactgcacagccacagcggggctgtggagagctcccccaacccgcccttc
cgcaaggacctcatcagcctggactcgtccccagccaaagagcgactggaggagagctgc
gtgcacccactggaagaagccatgctgagctgtgacgtggatggctcccgccacttcccc
gagtcccggaacagcagccacatcaagagacccatgaatgccttcatggtatgggccaag
gacgagcggaggaagatcctccaagcctttccagacatgcacaactccagcatcagcaag
atccttggttcccgctggaagtccatgacgaaccaggaaaaacagccctactacgaggag
caggcgcggctgagccggcagcacctagagaagtacccagattataagtacaagcccagg
cccaagcgcacctgcatcgtggagggcaagcggctgcgcgtgggcgagtacaaggccctg
atgaggacacggcgccaagacgcccgccagagctacgtgatccccccacaggccggccag
attcaaatgagctcctcggatgtcctgttccctcgggccgcaggcgtgcatgtcccccag
agcctggaccccaacatgcctgtcatcgtcaacacctgcagcctcagggaggtggtggag
ggcgcggacgacagacactcggtggcggatgacgagatgtaccggtacagcgaggaggag
gactcggagggcgaagacaagagtgatggggagctggtggtgctcacagactga
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