Dipodomys merriami (Merriam's kangaroo rat): 138841333
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Entry
138841333 CDS
T11079
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
dmer Dipodomys merriami (Merriam's kangaroo rat)
Pathway
dmer03022
Basal transcription factors
dmer05016
Huntington disease
Brite
KEGG Orthology (KO) [BR:
dmer00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
138841333
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
138841333
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dmer03021
]
138841333
03036 Chromosome and associated proteins [BR:
dmer03036
]
138841333
Transcription machinery [BR:
dmer03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
138841333
Coactivators
SAGA/TFTC/STAGA complex
138841333
Chromosome and associated proteins [BR:
dmer03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
138841333
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF4
TAFH
tRNA-synt_1c
Motif
Other DBs
NCBI-GeneID:
138841333
NCBI-ProteinID:
XP_069898122
LinkDB
All DBs
Position
Unknown
AA seq
1043 aa
AA seq
DB search
MAAGSDLLDEVFFNSEVDEKVVSDLVGSLESQLAASAAHHHHLAPRTPELRAAAAGALGN
HVVSGSPAGAAGAGPAAPAEGAPAAAPEPPPAGRARPAGGGPRRAGPGSPRRPLVPAGPA
PAPAKLRPPPEASAGPCPAAAAAAAVTATAAAAGPEPAAAPPAGPGASKPGPPGPGAAQT
LNGSAAPPTAPHAAPAVSPVNNGPAPPPAAGSVIQAAPAPAPAAPSPPAAPAPAAPPPPA
PPAPAAPAAPARPPGHPAAPAPPAPAAAAAAAAAAQNGAGAAAAAPAPVPAPAAGGAAGL
GGQPGAGAPAQGGKAEPPKTAGPAAGAAAAAAAAAGAAGGVLLGPAMPGALPSPAGVPQP
APGTPAGLPKGAAAAATPSLPRTPSATTTGGIRATLTPTVLAPRLPQPPQNPTNIQNFQL
PPGMVLVRSENGQLLMIPQQALAQMQAQAHAQAQPQSTMAPRPATPTSAPPVQISTVQAP
GTPIIARQVTPTTIIKQVSQAQTTVQPTTTLQRSPGVQPQLVLGGSAQTASLGTATAVQT
GTPQRTVPGATTTSTAATETMENVKKCKNFLSTLIKLASSGKQSTETAANVKELVQNLLD
GKIEAEDFTSRLYRELNSSPQPYLVPFLKRSLPALRQLTPDSAAFIQQSQQQPPPASQAT
TALTAVVLSSSVQRTAGKTAASVTSALQPPVISLTQPTQVIQQPPKPGALIRPPQVTLTQ
TPMVALRQPHNRIMLTTSQQIQLNQLQPVPVVKPTVLPGTKALSTVSAQAAAAQKNKLKE
PGGGSFRDDDDINDVASMAGVNLSEESARILATNSELVGTLTRSCKDDTFLLPAPLQRRM
LEIGKKHGITELHPDVVSYVSHATQQRLQNLVEKISETAQQKNFSYKDDDRYEQASDVRA
QLKFFEQLDQIEKQRKDEQEREILMRAAKSRSRQEDPEQLRLKQKAKEMQQQELAQMRQR
DANLTALAAIGPRKKRKVDCAGPGSGAEGSGPGAAVPGSSGVGAPRQFTRQRITRVNLRD
LIFCLENERETSHSLLLYKAFLK
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgggctcggatctgctggacgaggtcttcttcaacagcgaggtggacgagaaa
gtggtgagcgacctggtgggctcgctcgagtcgcagctggcggccagcgcggcccaccac
caccacctcgcgccgcgcacgcccgagctgcgggccgcggccgccggcgcgctcgggaac
catgttgtgagcggcagcccggccggagccgcgggcgcagggccggccgcccccgccgag
ggcgcgcccgcagcggcgccggagccgccccccgcaggtagagcgcggccggcgggcggg
gggccgcggcgcgcgggccccggctcaccgcgccgcccgcttgtccccgcagggcccgcg
ccggcgcccgccaagctgaggccgccgcccgaggccagcgcggggccctgcccggccgcc
gccgccgccgccgccgtcaccgccaccgccgccgctgcggggcccgagcccgccgccgcc
ccgcccgccggccccggcgcctccaagcccggcccgcccggccccggcgccgcgcaaact
ttgaatgggagcgccgcgccgcccaccgcgccgcacgccgcacctgctgtcagcccggtc
aacaacgggcccgcgccgccgcccgccgccggctccgtcatccaggcggcccccgcgccc
gcgcccgccgcgccctcgccgcccgccgcgcccgcgcccgccgcgcccccgccgcccgcg
ccccccgcgcccgccgcgcccgccgcgcccgcccggccgcccggccaccccgccgcgccc
gcgccccccgcgcccgccgccgccgccgccgccgccgccgccgcgcagaacggggccggg
gccgccgccgccgcgcccgccccggtccccgccccggccgccgggggcgccgcggggctc
ggcgggcagccgggggccggcgcgcccgcgcaggggggcaaagccgagccgcccaagacc
gcggggccggcggcgggcgcggcggcggcggcggcggcggcggcgggcgcggcgggcggc
gtgctgctcgggcccgccatgccaggggcgctgcccagccccgccggcgtcccgcagccc
gcgcccgggaccccggcggggctgcccaagggcgccgccgccgccgcgacgcccagcctg
ccccggacgccctcggccaccaccaccggcgggatccgcgccaccctgacgcccaccgtg
ctggcgccccgactgccgcaaccgccgcagaacccgaccaacatccagaacttccagctg
cccccagggatggtcctcgtgcggagtgagaatgggcagctgttaatgatccctcagcag
gccctggctcagatgcaggctcaggcccatgcccaggcccagccacagagcaccatggct
ccgcgccctgccactcccacaagtgcccctcctgtccagatatccaccgtacaggctcct
gggacacctattattgcacggcaggtgaccccaactaccataattaagcaagtgtctcag
gctcagacaacggtacagcccactacaaccctgcaacgctccccgggggttcagcctcag
cttgttctgggtggctctgcccagacagcctctcttgggacagcaacagctgttcaaaca
ggaacacctcagcgaacggtcccaggggccaccaccacctccacagctgccacggaaact
atggaaaacgtgaagaaatgtaaaaattttctatctacgttaataaaactggcctcatct
ggtaaacagtctacagagacagcagctaatgtgaaagaactagtgcagaatttactggat
ggaaaaattgaagccgaagattttactagcaggttataccgagaacttaattcttcacct
caaccttaccttgtgcctttcctgaagaggagcttacccgccttgagacagctgaccccc
gactccgcggcctttatccagcagagccagcagcagccgccaccagcctcgcaggccacc
accgcactcacagccgtggtgctgagcagctcggtgcagcgcacagccgggaagacggct
gcctcagtgaccagcgccctccagccccctgtcatcagcctcacgcagcccacacaggtg
atccagcagccccccaagcctggagccctgatccggcccccgcaggtgaccttgacgcag
acgcccatggtcgcactgcggcagcctcacaaccggatcatgctcaccacatctcagcag
atccagctgaaccagctgcagccagtccccgtggtgaaacccaccgtgttacctggaacc
aaagccctttctactgtctcggcacaagctgctgctgcacagaagaacaagctcaaggag
cctgggggaggttcgtttcgggatgatgatgacatcaatgatgttgcatcgatggctgga
gtaaacctgtcagaagaaagtgcaagaatactggccacaaactctgagttggtggggacg
ctaacccggtcctgtaaggatgacaccttcctgctccccgcacccttgcaaaggaggatg
ttggaaatcggtaaaaagcacggcataactgaattgcacccagatgtagtgagttatgtg
tcccacgccacgcagcagaggctacagaatcttgtagaaaaaatatctgaaacggctcag
caaaaaaacttctcttacaaggatgatgacagatatgaacaggcaagtgatgtccgggct
cagctcaaattttttgaacaacttgaccagattgaaaagcagagaaaagacgagcaggag
agggagatcctgatgcgggcggccaagtctcgatccagacaagaagatccagaacaatta
aggttgaagcagaaggcaaaagagatgcagcagcaggagctggcacaaatgcgacagcga
gatgccaacctcacagcactggcggccattgggcccaggaaaaagaggaaagtggactgt
gcggggccaggatcaggagcagagggctcaggccccggcgcggcagtcccaggcagctcc
ggcgtgggcgcccccaggcagttcacacggcaaagaatcacccgggtcaacctcagggac
ctcatattttgtttagaaaatgagcgcgagacaagccattcactgttgctctacaaagca
ttccttaagtaa
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integrated database retrieval system
