Dipodomys merriami (Merriam's kangaroo rat): 138841711
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Entry
138841711 CDS
T11079
Name
(RefSeq) ataxin-2-like protein isoform X1
KO
K23625
ataxin 2/2L
Organism
dmer Dipodomys merriami (Merriam's kangaroo rat)
Pathway
dmer05014
Amyotrophic lateral sclerosis
dmer05017
Spinocerebellar ataxia
dmer05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
dmer00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
138841711
05017 Spinocerebellar ataxia
138841711
05022 Pathways of neurodegeneration - multiple diseases
138841711
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dmer03019
]
138841711
Messenger RNA biogenesis [BR:
dmer03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
138841711
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SM-ATX
LsmAD
PAM2
DUF5415
Motif
Other DBs
NCBI-GeneID:
138841711
NCBI-ProteinID:
XP_069898601
LinkDB
All DBs
Position
Unknown
AA seq
1098 aa
AA seq
DB search
MLKPQPPQQTSQPQQPPPTQQAVARRPPGGTSPPNGGLPGPLAVTAAPPGPPVTASPCLG
PAAGSGLRRGAEGILAPPPPPHQERPGAAAIGSARGQSTGKGPPQSPVFEGVYNNSRMLH
FLTAVVGSTCDVKVKNGTTYEGIFKTLSSKFELAVDAVHRKASEPAGGPRREDIVDTMVF
KPSDVMLVHFRNVDFNYATKDKFTDSAIAMNSKVNGEHKEKVLQRWEGGDSNSDDYDLES
DMSNGWDPNEMFKFNEENYGVKTTYDSSLSSYTVPLEKDNSEEFRQRELRAAQLAREIES
SPQYRLRIAMENEDGRTEEEKHSAVQRQGSGRESPSLASREGKYIPLPQRVREGPRGGVR
CSSSRGGRPGLSSLPPRGPHHLDSSSPGPGSETRGINGGPSRMSPKAQRPLRGAKTLSSP
NSRPSGEASVPPPAAALPFLPVGRMYPPRSPKSAVPAPISAPCPEPPIGSAVATSAASIP
VTSVVDPGAGSITPASPKISLAPTDVKELPPKEPGRTLEPQDLARIAGKVSGLQNEQKRF
QLEELRKFGAQFKLQPPSSPETSLDPFSPRILKEEAKGKEKEVDGLLTSESMGSPVSSKT
ESVSDKEDKAPLASAGGAEGSEQPPPPCPSQTGSPPVGLIKGDDKDEGPVAEQVKKSTLN
PNAKEFNPTKPLLSVNKSTSTPTSPGPRTHSTPSIPVLTAGQSGLYSPQYISYIPQIHMG
PAVQAPQMYPYPVSNSVPGQQGKYRGAKGSLPAQRSDQHQPASAPPMMQAAAAAGPPLVA
ATPYSSYIPYNPQQFPGQPAMMQPMAHYPSQPVFAPMLQSNQRMLTSGSHPPAIVSSSTP
QYPSAEQPTPQALYATVHQSYPHHATQLHAHQPQPATTPTGSQPQSQHAAPSPVQHQAGQ
APHLGSGQPQQNLYHPGALTGTPPSLPPGPSAQSPQSSFPQPAAVYAIHPHQQLPHGFTN
MAHVTQAHVQTGVTAAPPPHPGAPHPPQVMLLHPTQGHGGPPQGAVPPSGVPALSASTPS
PYPYIGHPQGEQPGQAPGFPGGADDRILCRVGRSHSRRRQGLAPGSVLCFPPSSLSCDPA
APLPTASPALSDPDCLLT
NT seq
3297 nt
NT seq
+upstream
nt +downstream
nt
atgttgaagcctcagccgccacaacagacctcccaaccccagcagccgccccccacgcaa
caggccgtagcccgccggcctcccggcggcaccagccctcccaacggcggcctcccgggg
ccgctggccgtcacggcagctccgccggggcctcccgtcaccgcctccccctgcctgggg
cccgcggctgggagcgggcttcgccggggagccgaaggcatcttagcgccgccgccgccg
ccgcatcaggagaggccgggggccgccgccatcggcagcgccaggggacagagcacagga
aagggacccccacagtcacctgtgtttgaaggtgtctataataattccaggatgctgcat
ttcctgacagctgtggtgggctccacttgtgatgtaaaggtgaagaatggcactacctat
gaaggcattttcaagactctgagctcaaagtttgagctggcagtagatgctgtgcaccgg
aaagcatctgagccagcgggtggccctcgtcgtgaggacattgtagacaccatggtgttt
aagccaagtgatgtcatgcttgtccacttccgaaatgttgacttcaattatgctactaaa
gacaagttcacggactcagccattgctatgaactcaaaagtgaacggcgagcacaaagag
aaggtgcttcagcgctgggagggtggtgacagcaacagcgatgactatgatctcgagtct
gacatgtccaatggatgggaccccaatgaaatgttcaaattcaatgaggagaactatggc
gtgaagaccacctacgacagcagtctctcctcttacacggtgcccttagaaaaagacaac
tcagaagagttccgtcagcgggagctgcgtgcagcccaactggctcgagaaattgagtcg
agtccccagtatcgtctacgaatcgccatggaaaatgaggatgggcgcacagaggaagaa
aagcatagtgcagtccagcggcaggggtcagggcgggagagccccagcctggcatccagg
gaggggaagtatatccctttgcctcagcgcgttcgggaaggtccccggggaggagttcgg
tgtagcagttctcgaggcggtcggcctggccttagctcactgccacctcgtggtcctcat
cacctggacagcagcagccccggccccgggtctgagactcgtggtatcaatggaggtcct
tcccgcatgtctcccaaggcacagcggcctctgagaggtgctaagactctgtcttcacct
aacagtaggccttccggagaagcttctgttccaccccctgctgcagctctcccttttctt
ccagtgggacggatgtaccccccacgctctcccaagtctgctgtccctgccccaatctca
gctccttgtcctgagccccccattggctcggcagtagcaacttctgcagcctccatccct
gtcacgtcagttgtggatcctggagcaggctctattaccccagcttctccgaagatctca
ctggcccccacagatgtaaaagaactcccacccaaggagcctggcaggaccctggagccc
caggacctggcccggatagctgggaaagtctctggccttcaaaatgaacagaaacgattt
caactggaagaactaaggaagtttggggcccagttcaagcttcagccccccagctcccct
gagaccagcctggatcctttttctccccggatcttaaaggaggaggccaaagggaaggag
aaggaggtcgatggtctattaacttcagagtccatggggtctccagtctcctcgaagacg
gagtccgtatcggataaagaagacaaagcacctctagcatcagcaggaggcgctgagggt
tccgagcagcctccaccaccttgcccgagccagactggcagccccccagtgggccttatc
aagggagatgacaaagatgagggccctgttgctgaacaagtaaagaaatcaacgttgaac
cccaacgccaaggagtttaatcccacaaagcctctattatctgtgaacaaatctaccagt
actccaacttctccagggcctcgcactcactcaactccctccatcccggtgctgacagca
ggccagagtgggctctacagcccacagtacatctcctacatacctcagatccatatggga
ccagctgtgcaggcacctcagatgtatccgtatcctgtatccaattcagtgcctgggcag
cagggcaagtaccggggtgcaaaaggctctctccccgctcagcgctcggaccaacaccag
ccagcctcagcccctcccatgatgcaggcggccgctgctgctggcccacccttggtggct
gccacaccttactcttcgtacatcccttacaatccgcagcagttccccggccagcctgca
atgatgcagcctatggcccactacccctcacagccggtgtttgcccccatgcttcaaagc
aaccaacgtatgctaacgtcgggtagccaccccccggccattgtgtcatcctccactcct
cagtacccttctgcagagcagcccaccccccaagccctctatgccactgttcaccagtcc
tatccacaccatgccacgcagctccatgctcaccagccgcagccggccaccacgcctact
gggagccagccgcagtcccagcatgcggcccccagtcccgtccagcatcaggcgggacag
gccccacacctgggcagtggacagccacagcagaatctgtaccacccaggggccctgacg
ggcacgccaccatctctgccaccgggaccttctgcccagtcccctcagagcagcttcccc
cagccagccgctgtatatgccatccatccccaccagcagctgccccacggcttcaccaac
atggcccatgttacccaggcccatgtccaaactggagtcacagcagccccgcccccgcac
cctggggctccccacccgccccaggtgatgctgctgcaccccacccagggccatgggggg
cccccccaaggcgcagtacccccgagtggggtacctgcactctcagcttccacaccctca
ccctatccctacatcggacacccccaaggtgagcagcctggccaggcgcctggatttcca
ggaggagccgatgacaggattctatgtagggtgggcagaagccacagtcgccgccgccag
gggcttgctcctggctctgtcctttgcttccctccgtcctcgctcagttgtgatccagca
gcccccctccccactgcctccccagctctcagtgaccccgactgcctcctgacttag
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